DY258239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.507e-22 Identity = 47/122 (38.52%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID------TEVTAFSNGQL 350 DA F+PEF+NR+D+ ++F PL R+++ IV +Q+ V +R+ DR++ + VTD+A + L + GYDP YG RP++R++Q V ++LA+ +L G+ D DT+++D E++A+++ Q+ Sbjct: 752 DAVHMNFKPEFLNRLDDIVMFHPLTREELGGIVDIQVAGVSQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVDQTGGEHLELSAWASDQI 873
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_SALTY (Chaperone protein clpB OS=Salmonella typhimurium GN=clpB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.804e-22 Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE 287 FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL + GYDP YG RP+KR IQQ +EN LA+ IL GE Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_SALTI (Chaperone protein clpB OS=Salmonella typhi GN=clpB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.804e-22 Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE 287 FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL + GYDP YG RP+KR IQQ +EN LA+ IL GE Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.804e-22 Identity = 52/118 (44.07%), Postives = 76/118 (64.41%), Query Frame = 3 Query: 6 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQ 359 A R FRPEF+NR+D+ I+FQPL R Q+ IV +QL R+++ +A++ + + VT AA L GYDP YG RP+KR IQ+ +EN +A IL +F D +++D + + GQL Q Sbjct: 757 ALRQHFRPEFLNRIDDTILFQPLSRGQLQQIVDIQLQRLKRLLAEQAIALNVTPAAAANLADRGYDPVYGARPLKRAIQRLIENPVASLILEQQFDAGDALIVDVD----AEGQLQFQ 870
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_WOLPM (Chaperone protein clpB OS=Wolbachia pipientis wMel GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.672e-21 Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVI 314 +S FRPEF+NR+DE I+F L RD I I+ +Q +QK +A RK+ + + A +L+ GYDP YG RP+KRVIQ+ ++N LAK +L GE + D +++ Sbjct: 741 KSAFRPEFLNRLDEIIIFHSLTRDDIYKIIDVQFSYLQKTLAKRKLSISLLQEAKELIAQTGYDPEYGARPLKRVIQECIQNNLAKLVLSGEVVENDELIV 841
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVY (Chaperone protein clpB OS=Vibrio vulnificus (strain YJ016) GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.672e-21 Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRG 284 FRPEF+NRVDE +VF PL +D I SI +QL+R+ R+ + +++V+D A++L+ +G+DP YG RP+KR IQQ +EN LAK IL G Sbjct: 749 FRPEFLNRVDETVVFHPLSQDHIKSIAAIQLNRLANRMEEHGYQLEVSDKALELIAQVGFDPVYGARPLKRAIQQSIENPLAKSILAG 836
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.672e-21 Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE 287 FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL GYDP YG RP+KR IQQ +EN LA+ IL GE Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.672e-21 Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE 287 FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL GYDP YG RP+KR IQQ +EN LA+ IL GE Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.672e-21 Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE 287 FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL GYDP YG RP+KR IQQ +EN LA+ IL GE Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.672e-21 Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE 287 FRPEF+NR+DE +VF PL I+SI ++QL R+ KR+ +R ++ ++D A++LL GYDP YG RP+KR IQQ +EN LA+ IL GE Sbjct: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 The following BLAST results are available for this feature:
BLAST of DY258239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258239 ID=DY258239; Name=DY258239; organism=Citrus clementina; type=EST; length=587bpback to top |