DY258239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNPX (Chaperone protein clpB 1 OS=Synechococcus sp. (strain WH8102) GN=clpB1 PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.672e-21 Identity = 43/105 (40.95%), Postives = 76/105 (72.38%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 +A ++ FRPEF+NR+D+ I+F+ L+++++ IV LQ++R++ R+ RK+ +Q++D A L ++G+DP YG RP+KR IQ+ +E +AK IL G+ + T+ +D Sbjct: 749 EALKAKFRPEFLNRLDDQIIFRSLEKEELRRIVSLQVERLRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLKRAIQRELETPIAKAILAGQLSEGQTVQVD 853
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_STRAL (Chaperone protein clpB OS=Streptomyces albus G GN=clpB PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.184e-21 Identity = 45/105 (42.86%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 + RS F+PEF+NR+D+ ++F LD D+++ I LQ+ + +R+ADR++ + VT A+ L G+DP YG RP++R+IQ + + LAK IL GE +D DT+ +D Sbjct: 740 EVVRSSFKPEFLNRLDDLVIFSALDEDELARIAGLQIAGLARRLADRRLSLDVTPEALAWLAKEGFDPAYGARPLRRLIQTAIGDRLAKEILAGEVRDGDTVRVD 844
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.184e-21 Identity = 55/126 (43.65%), Postives = 81/126 (64.29%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFRRL 380 +A S FRPEF+NR+DE I+F L + Q+ IV++Q R++ R+A RKM ++++DAA+ L G+DP YG RP+KR IQ+ +E +AK ILR F + DTI +D T ++L F+RL Sbjct: 751 EAMLSNFRPEFLNRIDEIIIFHSLQKAQLREIVKIQTHRLESRLA-RKMSLKLSDAALDFLAE-GFDPVYGARPLKRAIQRELETTIAKEILRSNFTEGDTIFVDVGET---------ERLEFKRL 865
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_COXBU (Chaperone protein clpB OS=Coxiella burnetii GN=clpB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.184e-21 Identity = 46/99 (46.46%), Postives = 71/99 (71.72%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 FRPEF+NR+DE +VF L ++QI +I +Q+DR++KR+ ++ ++ ++D A+ L LGYDP YG RP+KRV+QQ +EN L++ IL G+F I I+ Sbjct: 750 FRPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLTISDDALDYLSELGYDPVYGARPLKRVLQQQLENPLSQKILEGKFVPGSLINIE 848
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.184e-21 Identity = 47/105 (44.76%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 D + FRPEF+NR+DE +VF L+ I SI R+QL R+ +R+ ++M++ V+DAA+ + G+DP +G RP+KR IQQ +EN +AK IL G F D + +D Sbjct: 748 DELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGARPLKRAIQQQIENPVAKLILEGVFGPRDVVPVD 852
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_BORBR (Chaperone protein clpB OS=Bordetella bronchiseptica GN=clpB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.184e-21 Identity = 47/105 (44.76%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 D + FRPEF+NR+DE +VF L+ I SI R+QL R+ +R+ ++M++ V+DAA+ + G+DP +G RP+KR IQQ +EN +AK IL G F D + +D Sbjct: 748 DELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGARPLKRAIQQQIENPVAKLILEGVFGPRDVVPVD 852
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_HAEIN (Chaperone protein clpB OS=Haemophilus influenzae GN=clpB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.853e-21 Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 FRPEF+NR+DE +VF PL ++ I +I +QL+R+ KR+ R ++ TDA + +G +GYDP YG RP+KR IQQ +EN LA+ IL G + ID Sbjct: 748 FRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYDPIYGARPLKRAIQQEIENSLAQQILSGALLPGKVVTID 846
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_BORPA (Chaperone protein clpB OS=Bordetella parapertussis GN=clpB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.853e-21 Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 D + FRPEF+NR+DE +VF L+ I SI R+QL R+ +R+ ++M++ V+DAA+ + G+DP +G RP+KR +QQ +EN +AK IL G F D + +D Sbjct: 748 DELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDAALAEIARSGFDPVFGARPLKRAVQQQIENPVAKLILEGVFGPRDVVPVD 852
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB2_STRAW (Chaperone protein clpB 2 OS=Streptomyces avermitilis GN=clpB2 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.853e-21 Identity = 45/104 (43.27%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 R FRPEF+NRVD+ ++F+PL QI IV LQ D +++R+A+R++ +++TDA +++ GYDP YG RP++R I VE + + +LRG+ +D T+ +D E Sbjct: 756 RGHFRPEFLNRVDDIVLFKPLGERQIERIVELQFDELRQRLAERRITVELTDAGREVIAHQGYDPVYGARPLRRYISHEVETLVGRALLRGDVQDGATVRVDAE 859
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.726e-21 Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRG 284 FRPEF+NRVDE +VF PL +D I SI +QL+R+ R+ + ++V+D A++L+ +G+DP YG RP+KR IQQ +EN LAK IL G Sbjct: 749 FRPEFLNRVDETVVFHPLGQDHIKSIAAIQLNRLANRMEEHGYPLEVSDKALELIAQVGFDPVYGARPLKRAIQQSIENPLAKSILAG 836 The following BLAST results are available for this feature:
BLAST of DY258239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258239 ID=DY258239; Name=DY258239; organism=Citrus clementina; type=EST; length=587bpback to top |