DY258239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_PHOLL (Chaperone protein clpB OS=Photorhabdus luminescens subsp. laumondii GN=clpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.726e-21 Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 FRPEF+NR+DE +VF PL R +S+I +QL R+ KR+ +R ++ +T A+++L G+DP YG RP+KR IQQ +EN LA+ IL G+ + +D E Sbjct: 749 FRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVTITQQALEILAEAGFDPVYGARPLKRAIQQEIENPLAQKILSGQLLPGKPVTLDVE 849
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_CAUCR (Chaperone protein clpB OS=Caulobacter crescentus GN=clpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.726e-21 Identity = 53/124 (42.74%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFR 374 + R FRPEF+NR+DE I+F+ L R + IVR+QL RV+K +ADR+M + + A+ L GYDP YG RP+KRVIQ+ + + +AK +L GE +D I + ++GQL K V + Sbjct: 741 NTVRGHFRPEFLNRIDEIILFKRLSRHNMGDIVRIQLQRVEKLLADRRMALALDAEALNWLADKGYDPVYGARPLKRVIQKELVDPIAKKLLAGEIEDGGVIAV-----GVTDGQLSFGKAVLQ 859
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_SHEON (Chaperone protein clpB OS=Shewanella oneidensis GN=clpB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21 Identity = 42/89 (47.19%), Postives = 66/89 (74.16%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE 287 FRPEF+NR+DE +VF PLD + I I +Q+ ++KR+A++ +++TD A+ L+ +G+DP YG RP+KR +QQ +EN LA+ +LRG+ Sbjct: 749 FRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKDYTLEITDEALSLIAEIGFDPVYGARPLKRALQQEMENPLAQKLLRGD 837
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMB (Chaperone protein clpB OS=Neisseria meningitidis serogroup B GN=clpB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21 Identity = 43/101 (42.57%), Postives = 69/101 (68.32%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 FRPE +NR+DE +VF LD+D I +I ++QL ++KR+ + +++ V+DAA+ ++ G+DP YG RP+KR IQ +EN LAK +L G + E I ++ + Sbjct: 752 FRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEAD 852
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21 Identity = 46/99 (46.46%), Postives = 69/99 (69.70%), Query Frame = 3 Query: 24 RPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDT 320 RPEF+NR+DE I+F PL +I IV LQ+ VQK +A+ +++++TDAA+ L +GYDP +G RPVKR IQ+Y+ N+L+K +L E I++D+ Sbjct: 755 RPEFLNRIDETIMFLPLTETEIRQIVLLQIKGVQKMLAENGVELEMTDAALNFLSQVGYDPEFGARPVKRAIQRYLLNDLSKKLLSQEVDRSKAIIVDS 853
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB2_THEEB (Chaperone protein clpB 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21 Identity = 47/104 (45.19%), Postives = 75/104 (72.12%), Query Frame = 3 Query: 6 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 +A+ FRPEF+NR+D+ I+F L R +++ I ++QL RV+K +AD+K+ +++T AA+ L ++G+DP YG RP+KR IQ+ +EN LA +L F DTI++D Sbjct: 759 SAQKYFRPEFLNRIDDVILFHGLGRTELAQIAQIQLRRVEKLLADQKIHLRLTPAALDHLVAVGFDPVYGARPLKRAIQRELENPLAVKLLEEVFTPGDTILVD 862
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21 Identity = 47/102 (46.08%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 R FRPEF+NR+D+ I+F L RD++ IV LQ+ R++K + ++K+ + ++DAA+ + S GYDP YG RP+KR IQ+ +EN +A IL F D I+ID Sbjct: 762 RKHFRPEFLNRIDDLIIFHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQLENPIATKILENTFVAGDKILID 863
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_CORDI (Chaperone protein clpB OS=Corynebacterium diphtheriae GN=clpB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.300e-21 Identity = 42/108 (38.89%), Postives = 77/108 (71.30%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEV 326 DA + F+PEF+NR+D+ ++F PL ++Q++ IV +Q+ ++ +R+A R++ + V+D+A L GY+P YG RP++R+IQQ + ++LAK +L GE +D + +D ++ Sbjct: 732 DAVKRAFKPEFVNRLDDVVIFDPLSQEQLTHIVEIQIAQLAQRLAARRLTLAVSDSAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLSGEVRDGSEVHVDADL 839
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_PASMU (Chaperone protein clpB OS=Pasteurella multocida GN=clpB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.084e-20 Identity = 46/99 (46.46%), Postives = 64/99 (64.65%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 FRPEF+NR+DE +VF PL ++ I I +QL R+ KR+ ++ TDA + +G +GYDP YG RP+KR IQQ +EN LA+ IL G+ + ID Sbjct: 747 FRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDFIGEVGYDPVYGARPLKRAIQQEIENPLAQQILSGKLLPNQLVTID 845
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.084e-20 Identity = 42/103 (40.78%), Postives = 75/103 (72.82%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVT 329 F+PEF+NR+DE +++ L +QI IV +Q++ +++R+ADR++ ++++D A + L GYDP YG RP+KR IQ+ +++ LA +L G+F++ DT+ +D V+ Sbjct: 754 FKPEFLNRIDEIVIYHALPLEQIKKIVDIQVECLKQRLADRRIVLELSDKAREYLSREGYDPAYGARPLKRTIQRKIQDPLALALLEGKFQEGDTVRVDLSVS 856 The following BLAST results are available for this feature:
BLAST of DY258239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258239 ID=DY258239; Name=DY258239; organism=Citrus clementina; type=EST; length=587bpback to top |