DY258239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.487e-19 Identity = 42/104 (40.38%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 +++F+PEF+NR+DE I+F L+R+ I IV++QL+ ++K + + + ++ ++A+ L GYDP++G RP+KR+IQ+ ++N LAK IL GE +T+ I E Sbjct: 745 KAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLESLKKILLAQNILLEFDESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGNTVKIARE 848
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.487e-19 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE--VTAFSNGQLP 353 R+ FRPEF+NRVDE I+F L + ++ IV +Q R+ K + DRK+ + + AA L G+DP YG RP+KRVIQ+ V++ LA+ IL G KD D + I E V F NG+ P Sbjct: 747 RAHFRPEFLNRVDEIILFHRLQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVKDGDHVAISAEGGVLTF-NGKPP 861
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_PHOPR (Chaperone protein clpB OS=Photobacterium profundum GN=clpB PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.487e-19 Identity = 41/91 (45.05%), Postives = 64/91 (70.33%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFK 293 FRPEF+NRVDE +VF PL ++ I I +Q++R+ R+ ++ ++ V ++A+ + G+DP YG RP+KR IQQY+EN LA+ IL G+ + Sbjct: 749 FRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYELTVQESALDFVAKAGFDPVYGARPLKRAIQQYIENPLAQEILSGKLE 839
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.487e-19 Identity = 46/109 (42.20%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFS 338 R FRPEF+NRVDE ++F+PL QI+ IV L L R++ R+A+RK+ +++ D A + YDP YG RP++R +Q +E LA+ ++ GE +D T+ +D A S Sbjct: 753 RRHFRPEFLNRVDETVLFKPLLPAQIARIVELLLGRLRGRLAERKIDIRLGDVARDFIAKAAYDPVYGARPLRRYLQHNIETPLARKLIAGELRDGTTVEVDVVDDALS 861
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: HS101_ORYSJ (Heat shock protein 101 OS=Oryza sativa subsp. japonica GN=HSP101 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.554e-19 Identity = 43/102 (42.16%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 R FRPE +NR+DE ++F PL +Q+ + RLQ+ V R+A+R + + VTDAA+ ++ SL YDP YG RP++R I++ V +L+K +++ E + T+ ID Sbjct: 749 RRHFRPELLNRLDEIVIFDPLSHEQLRKVARLQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQEEIDENCTVYID 850
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_MYCTU (Chaperone protein clpB OS=Mycobacterium tuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.554e-19 Identity = 43/111 (38.74%), Postives = 78/111 (70.27%), Query Frame = 3 Query: 6 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFS 338 A R+ F+PEF+NR+D+ ++F+ L+ +++ IV +QL ++ KR+A R++++QV+ A + L G+DP YG RP++R++QQ + ++LAK +L G+ D DT+ ++ A S Sbjct: 734 AVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSPDADS 844
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.554e-19 Identity = 43/111 (38.74%), Postives = 78/111 (70.27%), Query Frame = 3 Query: 6 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFS 338 A R+ F+PEF+NR+D+ ++F+ L+ +++ IV +QL ++ KR+A R++++QV+ A + L G+DP YG RP++R++QQ + ++LAK +L G+ D DT+ ++ A S Sbjct: 734 AVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSPDADS 844
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_RICCN (Chaperone protein clpB OS=Rickettsia conorii GN=clpB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.948e-19 Identity = 41/104 (39.42%), Postives = 74/104 (71.15%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 +++F+PEF+NR+DE I+F L+R+ I IV++QL+ ++K + + + ++ ++A+ L GYDP++G RP+KR+IQ+ ++N LAK IL GE T+ I+++ Sbjct: 745 KAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLESLKKILLAQNIILEFDESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGKTVKINSK 848
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.948e-19 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 F+PEF+NRVD+ I+F+PL + I I+ + L V+ R+ +R + ++VTD A ++L GYDP YG RP+KR I +E E+AK I+ GE D +ID Sbjct: 757 FKPEFLNRVDDIIMFRPLSSEGIKKIIDIFLRDVENRLRERNITLEVTDRAKEILAEEGYDPVYGARPLKRYISNVLETEIAKKIIAGEIYDGSVALID 855
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_RICTY (Chaperone protein clpB OS=Rickettsia typhi GN=clpB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.769e-19 Identity = 42/104 (40.38%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 R++F+PEF+NR+DE I+F L+R+ I IV++QL ++K + + + ++ ++A+ L GYDP++G RP+KR+IQ+ ++N LAK IL G+ +T+ I E Sbjct: 745 RAVFKPEFLNRLDEIILFHRLNRNNIYDIVKIQLGSLKKILLQQNIILEFNESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGKISSGNTVKIARE 848 The following BLAST results are available for this feature:
BLAST of DY258239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258239 ID=DY258239; Name=DY258239; organism=Citrus clementina; type=EST; length=587bpback to top |