DY258240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: FXL13_HUMAN (F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 7.330e-14 Identity = 74/268 (27.61%), Postives = 132/268 (49.25%), Query Frame = 1 Query: 4 VGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLN-CGEKLKALSLVSCLGIKDQNLGVRSVSPCKSLRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQGVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKCA-VTDFGIASL-AHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDML 798 + K PNL + C ++D+ L S + L L L C RI +G L +++ L+L +C+ + D ++ ++ C +L LS+RNC + + + L ++DLSG +++ G L VL S L ++++S C +TD + + LE L++ C ++SD + A+A C L L ++ C +TD + L A +YL+ IL +SGC +++D+ L L+ + L L +Q+C IS + + Sbjct: 421 IDKNYPNLSHIYMADCKGITDSSLRSLSPLK-QLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASV-MKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIF-SLVSIDLSGTD-ISNEG-LNVL-SRHKKLKELSVSECYRITDDGIQAFCK-SSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLH--ILDISGCVLLTDQILEDLQIGCKQLRILKMQYCTNISKKAAQRM 679
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: POF2_SCHPO (SCF E3 ubiquitin ligase complex F-box protein pof2 OS=Schizosaccharomyces pombe GN=pof2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.638e-13 Identity = 68/285 (23.86%), Postives = 125/285 (43.86%), Query Frame = 1 Query: 4 VGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKLKALSLVSCLG---------IKDQNLGVRSVS------------------PCKSLRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQGVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKC-AVTDFGIASLAHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAI 774 + CPNLK + C + D G++ K L L + C ++T + +L+ E L L + C G + +N G++ +S ++R+LS+ N P D+ + ++ +L ++ LS G+TD+ L L L ++L C +TD V + + + ++ GC ++SD ++ A+A P L + + KC +TD + L+ NL+ + LS C ++ KS+ L +TL L++ N+I Sbjct: 141 ISDNCPNLKALNIGNCGLVEDTGMVQIIKRCPYLNRLIIPNCRKLTDVSL--QILSEKEDLIELDISGCEGFHNADTLSRLVSRNRGLKELSMDGCTELSHFITFLNLNCELDAMRALSLNNLPDLKDSDIELITCKFSKLNSLFLSKCIGLTDSSLLS-LTKLSQSLTTLHLGHCYEITDIGVQCLLK-SCKNITYIDFGGCLRLSDIAVSAIA-KLPYLQRVGLVKCICLTDLSVILLSGSFSRNLERVHLSYCIGLTAKSVSYLMYNCKTLKHLSVTGINSI 420
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: AMN1_PONAB (Protein AMN1 homolog OS=Pongo abelii GN=AMN1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.358e-12 Identity = 60/187 (32.09%), Postives = 99/187 (52.94%), Query Frame = 1 Query: 265 LRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQG----VTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKCAVTDFGIASLAHGNYL-NLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQL 810 +++L +R+C DA+L L C +L+ ++L+ +G VT G V SC L + +L C NLTD+ V +A L+ L+++NL GC I+D SL A+ NCP L +D S V+D G+ +L G L+ + + C ++D ++ A+ + L C I+ +S ++L EQL Sbjct: 63 VQTLDLRSCD-ISDAALLHLSN-CRKLKKLNLNASKGNRVSVTSEGIKVVASSCSY-LHEASLKRCCNLTDEGVVALA-LNCQLLKIINLGGCLSITDVSLHALGKNCPFLQCVDFSATQVSDSGVIALVSGPCAKKLEEIHMGHCVNLTDGAVEAVLTYCPQIRILLFHGCPLITDHSREVL-EQL 244
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: FBL12_ARATH (F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana GN=FBL12 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.079e-12 Identity = 74/290 (25.52%), Postives = 127/290 (43.79%), Query Frame = 1 Query: 25 LKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKLKALSLVSCLGIKDQNLGVRSVSPCK-SLRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQGVTDAGFL---PVL-----ESCE------------AGLAKVNLSG--CVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKCAVTDFGIASLAHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQLWRGDV 825 L+ L C L+D+ L S L +L L+ C I+ G C LS+VS ++G+ +++ SL+ +++ CP D + L + C QL++V +S + +T GF P L +SC+ G+ +N+SG C D +V + + L +LNL CR + D S+ A+A CPLL + +++ C NL+ L ++ C + D+ L ALR L L + ++ +++M +L R D+ Sbjct: 93 LEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCPN----LSVVSLYRCNISDIGLETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIAS-KLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAIEMF--RLHRADI 375
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: FXL13_MOUSE (F-box/LRR-repeat protein 13 OS=Mus musculus GN=Fbxl13 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.022e-12 Identity = 63/225 (28.00%), Postives = 110/225 (48.89%), Query Frame = 1 Query: 178 EKLKALSLVSCLGIKDQNLGVRSVSPCK-SLRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQGVTD------AGFLPVLESCEAG----------------LAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKC-AVTDFGIASL-AHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAIS 777 ++L L+L +C+ I D L P LR L++ NC GD+S+ L + CP L ++L + +TD A L ++ +G L +V++S CVN+TD + + LE L++ C +++D + +A C + L+++ C +TD G+ L A +YL+ IL +SGC ++D+ + L+ + L L +Q C +IS Sbjct: 502 KQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDFGIRAYCKT-SLLLEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCHYLH--ILDISGCIQLTDQIIQDLQIGCKQLRILKMQFCKSIS 723 HSP 2 Score: 68.9366 bits (167), Expect = 7.585e-11 Identity = 64/264 (24.24%), Postives = 121/264 (45.83%), Query Frame = 1 Query: 16 CPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKLKALSLVSCLGIKDQNLGVRSVSPCKSLRSLSIRNCPGFGDASLAVL--GKLCPQLQNVDLSGLQGVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKCA-VTDFGIASLAHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDML 798 CP + L +SD+ + + L+ ++ E RI+ F S+ + + +V C G+ D +L +S+S K L L++ NC GD L G +L+ ++L+ + D+ + + E C L +NL C +LTD + +A + L ++++D + M + + L ++ VS C +TDFGI + + L L+ L +S CS ++D + + + LN+ C I+ +++L Sbjct: 426 CPRISSVVLIGSPHISDSAFKALSSC--DLKKIRFEGNKRISD-ACFKSIDRNYPGINHIYMVDCKGLTDSSL--KSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCP-NLHYLNLRNCEHLTDLAIEYIASM----LSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDFGIRAYCKTSLL-LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEIL 678
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: AMN1_HUMAN (Protein AMN1 homolog OS=Homo sapiens GN=AMN1 PE=2 SV=4) HSP 1 Score: 72.4034 bits (176), Expect = 6.860e-12 Identity = 59/187 (31.55%), Postives = 99/187 (52.94%), Query Frame = 1 Query: 265 LRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQG----VTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKCAVTDFGIASLAHGNYL-NLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQL 810 +++L +R+C DA+L L C +L+ ++L+ +G VT G V SC L + +L C NLTD+ V +A L+ L++++L GC I+D SL A+ NCP L +D S V+D G+ +L G L+ + + C ++D ++ A+ + L C I+ +S ++L EQL Sbjct: 63 VQTLDLRSCD-ISDAALLHLSN-CRKLKKLNLNASKGNRVSVTSEGIKAVASSCSY-LHEASLKRCCNLTDEGVVALA-LNCQLLKIIDLGGCLSITDVSLHALGKNCPFLQCVDFSATQVSDSGVIALVSGPCAKKLEEIHMGHCVNLTDGAVEAVLTYCPQIRILLFHGCPLITDHSREVL-EQL 244
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: AMN1_RAT (Protein AMN1 homolog OS=Rattus norvegicus GN=Amn1 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 8.960e-12 Identity = 57/187 (30.48%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 265 LRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQ----GVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKCAVTDFGIASLAHGNYL-NLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQL 810 ++ L +R+C D +L L K C +L+ ++L + +T G V SC + L +++L GC ++TD+ V +A L+ L++++L GC I+D SL A+ NCP L +D S V+D G+ +L G L+ +++ C ++DK++ A + L C I+ +S ++L EQL Sbjct: 63 VQRLDLRSC-NISDVALQHLCK-CRKLKALNLKSCREHRNSITSEGIKAVASSC-SDLHEISLKGCCSVTDEGVLALA-LNCQLLKIIDLGGCLSITDESLHALGKNCPFLQCVDFSTTQVSDNGVVALVSGPCAKQLEEINMGYCINLTDKAVEAALTACPQICILLFHGCPLITDHSREVL-EQL 244 HSP 2 Score: 70.0922 bits (170), Expect = 3.405e-11 Identity = 60/196 (30.61%), Postives = 93/196 (47.45%), Query Frame = 1 Query: 19 PNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEEC--HR--ITQLGFFGSLLNCGEKLKALSLVSCLGIKDQNLGVRSVSPCKSLRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQGVTDAGFLPVLES-CEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCD 591 P +++ LR C +SD L K L++L L+ C HR IT G +C + L +SL C + D+ + +++ C+ L+ + + C D SL LGK CP LQ VD S Q V+D G + ++ C L ++N+ C+NLTDK V L C +I + + + CPL+ D Sbjct: 61 PEVQRLDLRSCN-ISDVALQHLCKCR-KLKALNLKSCREHRNSITSEGIKAVASSCSD-LHEISLKGCCSVTDEGVLALALN-CQLLKIIDLGGCLSITDESLHALGKNCPFLQCVDFSTTQ-VSDNGVVALVSGPCAKQLEEINMGYCINLTDKAVEAA------------LTACPQI----CILLFHGCPLITD 235
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: ATB_ARATH (F-box protein At-B OS=Arabidopsis thaliana GN=ATB PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.528e-11 Identity = 65/222 (29.28%), Postives = 103/222 (46.40%), Query Frame = 1 Query: 235 GVRSVSPCKSLRSLS-IRNCPG-------FGDASLAVLGKLCPQLQNVDLSGLQGVTDAGFLPVLESC-------------------------EAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKCAVTDFGIASLAHGNYLNLQILSLSGCSMVSDKSLGALRK----LGQTLLGLNLQHCNAISTNSV 789 G++++ C+ L SLS +R C D + +L + C L++V L G V+DAGF +L SC L +V LS C +T + V + L G LE+L+L C+ ISD+ L +V + L L+++ VTD G+ +L + + + LSL GC VSD+ + L + +TL L+L H IS ++ Sbjct: 269 GLQALGFCQQLTSLSLVRTCYNRKISFKRINDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLLHSCRNLKKFEVRGAFLLSDLAFHDVTGSSCSLQEVRLSTCPLITSEAVKKLG-LCG-NLEVLDLGSCKSISDSCLNSV-SALRKLTSLNLAGADVTDSGMLALGKSD-VPITQLSLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMPGISDRAI 486
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: FB37_ARATH (F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.405e-11 Identity = 66/243 (27.16%), Postives = 108/243 (44.44%), Query Frame = 1 Query: 1 AVGKGCPNLKQFCLRKCAFLSDNG--LISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKLKALSLVSCLGIKD-----------------------QNLGVRSVSPCKSLRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQG--VTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKCAVTDFGIASLAHG 648 AV C NL++ +++ +D +I AA SL+S+ L+E + FG ++ + LK+L L C G D ++ + ++S C SL SL + P + LA + + C +L+ + + G + + D G + V + C L ++ L G VN T + +A LE L L GC D L +A CP L L + C ++D GI +LA+G Sbjct: 175 AVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSICLKELYNGQ---CFGPVIVGAKNLKSLKLFRCSGDWDLLLQEMSGKDHGVVEIHLERMQVSDVALSAISYCSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQ-LQELVLIG-VNPTTLSLGMLAA-KCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIENLANG 411
BLAST of DY258240 vs. ExPASy Swiss-Prot
Match: FXL17_MOUSE (F-box/LRR-repeat protein 17 OS=Mus musculus GN=Fbxl17 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 5.808e-11 Identity = 64/265 (24.15%), Postives = 121/265 (45.66%), Query Frame = 1 Query: 16 CPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKLKALSLVSCLGIKDQNLGVRSVSPCKSLRSLSIRNCPGFGDASLAVLGKLCPQLQNVDLSGLQGVTDAGFLPVLESCEAGLAKVNLSGCVNLTDKVVSTMAELHGWTLEMLNLDGCRKISDASLMAVANNCPLLCDLDVSKCAVTDFGIASLAHGNY-LNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQ 807 CP L ++ +C LSD +I+ A L+ + + ++T G C E LK + C I D+ + V + S C L+ + ++ D S+ + CP+LQ V G VT G + + + L+ ++L L ++ V + + L LNL I+D + +A L +L + C +TD+ A +A G Y + ++ + + C ++D+ + + ++L L L C+ ++ +V+ LV+Q Sbjct: 411 CPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSRCRE-LKDIHFGQCYKISDEGMIVIAKS-CLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC-SVTSKGVIHLTKL--RNLSSLDLRHITELDNETVMEIVK-RCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITDY--ALIAIGRYSVTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNELTVEQLVQQ 667 The following BLAST results are available for this feature:
BLAST of DY258240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258240 ID=DY258240; Name=DY258240; organism=Citrus clementina; type=EST; length=1330bpback to top |