DY258242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 2.097e-48 Identity = 97/213 (45.54%), Postives = 139/213 (65.26%), Query Frame = 2 Query: 170 DSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGN-----QPTANKSSGTVQMKGQPIQQNSNC 790 DS K S++ +DY+FK+L+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++T+ + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ LLV NKCD+ + +VV ++ + AD LG F E SAKD INV+Q F + I +KM P + Q+ Q + +C Sbjct: 6 DSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDC 218
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 192.586 bits (488), Expect = 2.739e-48 Identity = 93/200 (46.50%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 206 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGN-----QPTANKSSGTVQMKGQPIQQNSNC 790 +DY+FK+L+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++T+ + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ LLV NKCD+ + +VV ++ + AD LG F E SAKD INV+Q F + I +KM P + Q+ Q + +C Sbjct: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDC 218
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.041e-47 Identity = 95/203 (46.80%), Postives = 131/203 (64.53%), Query Frame = 2 Query: 206 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFL--------TMAGEIKKKMGNQPTANKSSGTVQMKGQPIQQNSNC 790 +DY+FKLL+IG+SSVGK+ L R+ DDS+ +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN+V+ W +I Y+ ++ +LV NKCD+ +VV + AD+LG+ F ETSAK+ INV+ F MA + K QP K K P QQ NC Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQQPKGQKLEANPTQK--PAQQQCNC 219
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.041e-47 Identity = 92/195 (47.18%), Postives = 128/195 (65.64%), Query Frame = 2 Query: 164 SQDSLLPSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGT 748 S+ P +DY+FKLLLIG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ ESF V+ W +I Y+ D+ +LV NKCDL + +VV + + AD+LG F E SAK+ INV+Q F + I KM + S G+ Sbjct: 5 SEPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGS 199
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.041e-47 Identity = 88/193 (45.60%), Postives = 138/193 (71.50%), Query Frame = 2 Query: 155 NGPSQDSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYV-DSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPT 727 NGP Q S+ PS + + YD FK++L+GDS VGK+CLL+RF D +++ ++IST+G+DF+ + +++DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T +SF+N++ WL EI YA V +L+ NK D +++VV + + A E G+PF+ETSA+ +NV+ AF +A E+K++ P+ Sbjct: 47 NGPPQ-SIRPSLGSTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPS 238
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.319e-47 Identity = 101/210 (48.10%), Postives = 134/210 (63.81%), Query Frame = 2 Query: 200 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGTVQMKGQPI------------QQNSNCC 793 +EYDYLFK +LIGDS VGKS LL+RF + + STIGV+F R + LD K IK QIWDTAGQER+R ITS+YYRGA G +IVYD+T+ SF+NV RWL E+ +A+ ++ +LV NK DL+ + V T+ A+AFA E + F+ETSA DA NVE+AF T+ EI + + N+ G GQ + + +S CC Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 2.319e-47 Identity = 86/192 (44.79%), Postives = 132/192 (68.75%), Query Frame = 2 Query: 155 NGPSQDSLLPSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYV-DSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPT 727 NGP Q + YD FK++L+GDS VGK+CLL+RF D +++ ++IST+G+DF+ + +++DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T +SF+N++ WL EI YA V +L+ NK D + +VV + + A E G+PF+ETSAK +NV+ AF +A E+K++ P+ Sbjct: 44 NGPPQSGRPSLGGTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPS 235
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 6.746e-47 Identity = 91/195 (46.67%), Postives = 127/195 (65.13%), Query Frame = 2 Query: 164 SQDSLLPSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGT 748 S+ P +DY+FKLLLIG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ ESF V+ W +I Y+ D+ +LV NKCDL + +VV + + A +LG F E SAK+ INV+Q F + I KM + S G+ Sbjct: 5 SEPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGS 199
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 8.810e-47 Identity = 94/182 (51.65%), Postives = 127/182 (69.78%), Query Frame = 2 Query: 206 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM--GNQPTANKSSG 745 Y YLFK ++IGD+ VGKSCLLL+F D + + TIGV+F R + +DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++AN ++ +L+ NKCDL + V T+ + FA E G+ FLETSA+ A NVE+AF+ A EI KK+ G +N+S G Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYG 184
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 8.810e-47 Identity = 94/182 (51.65%), Postives = 127/182 (69.78%), Query Frame = 2 Query: 206 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM--GNQPTANKSSG 745 Y YLFK ++IGD+ VGKSCLLL+F D + + TIGV+F R + +DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++AN ++ +L+ NKCDL + V T+ + FA E G+ FLETSA+ A NVE+AF+ A EI KK+ G +N+S G Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYG 184 The following BLAST results are available for this feature:
BLAST of DY258242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258242 ID=DY258242; Name=DY258242; organism=Citrus clementina; type=EST; length=930bpback to top |