DY258266

Overview
NameDY258266
Unique NameDY258266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1312
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A1_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 532.717 bits (1371), Expect = 5.626e-156
Identity = 259/272 (95.22%), Postives = 267/272 (98.16%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 914
            MGKEK HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKY CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG F+AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKKVGYNP+KVPFVPISGFEGDNMIERS+NLDWYKGPTLL+ALD INEPKRPSDKPL LPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGP+G
Sbjct:    1 MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYSCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGVFQAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKVPFVPISGFEGDNMIERSSNLDWYKGPTLLEALDQINEPKRPSDKPLHLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTG 272          

HSP 2 Score: 40.0466 bits (92), Expect = 5.626e-156
Identity = 21/52 (40.38%), Postives = 29/52 (55.77%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLVASHPK 1054
            F P  + TEVKSVE+HH       PG+  GF V+ + +  +   G VAS+ K
Sbjct:  268 FGPTGLTTEVKSVEVHHESLLEALPGDNVGFNVKNVAVKDL-KRGYVASNSK 318          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 545.428 bits (1404), Expect = 2.705e-154
Identity = 271/325 (83.38%), Postives = 285/325 (87.69%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGXXXXXXXXXXXXXXAGGPFRVKRVAFKWRNFACQGFQAGVWLLPTPKEESTRG 1073
            MGKEK HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGP+G                       V F  +N A +  + G ++    K++  +G
Sbjct:    1 MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG-YVASNSKDDPAKG 324          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_PEA (Elongation factor 1-alpha OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 524.628 bits (1350), Expect = 8.862e-154
Identity = 255/272 (93.75%), Postives = 265/272 (97.43%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 914
            MGKEK HINIVVIGHVDSGKSTTT H+IYKLGGIDKRVIERFEKEA EMNKRSFKYAW+LDKLKAERERGITIDIAL KFETTKYY TV+DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK RY+EIVKEVSSYLK+VGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF P+G
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTVHVIYKLGGIDKRVIERFEKEADEMNKRSFKYAWLLDKLKAERERGITIDIALLKFETTKYYSTVMDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYEEIVKEVSSYLKEVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFAPTG 272          

HSP 2 Score: 40.817 bits (94), Expect = 8.862e-154
Identity = 22/52 (42.31%), Postives = 29/52 (55.77%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLVASHPK 1054
            F P  + TEVKSVEMHH       PG+   F V+ + +  +   GLVAS+ K
Sbjct:  268 FAPTGLTTEVKSVEMHHEALTEALPGDNVRFNVKNVAVKDL-KHGLVASNSK 318          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 543.502 bits (1399), Expect = 1.028e-153
Identity = 274/333 (82.28%), Postives = 288/333 (86.49%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGXXXXXXXXXXXXXXAGGPFRVKRVAFKWRNFACQGFQAGVWLLPTPKEESTRGKLPTFPSQ 1097
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD IN+ KRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGP+G                       V F  +N A +  + G ++    K++  +G   +F SQ
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINDAKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG-FVASNSKDDPAKG-AASFTSQ 331          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2)

HSP 1 Score: 469.929 bits (1208), Expect = 6.751e-137
Identity = 225/272 (82.72%), Postives = 251/272 (92.28%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 914
            MGKEKTHINIVVIGHVD+GKSTTTGHLIYK GGIDKRVIE++EKEA+EM K+SFKYAWV+DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVL+I S TG FEAGI+K+GQTREHALLA+TLGVKQMI   NKMD  +  YS+ARYDEIVKEVSS++KK+GYNPEKV FVPISG+ GDNM+ERS  ++WYKGPTLL+ALD I EPKRP DKPLR+PLQDVYKIGGIGTVPVGRVETG++KPGMVVTF P+G
Sbjct:    1 MGKEKTHINIVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKYEKEASEMGKQSFKYAWVMDKLKAERERGITIDIALWKFETSKYYFTIIDAPGHRDFIKNMITGTSQADCAVLVIASPTGEFEAGIAKNGQTREHALLAYTLGVKQMIVAINKMDEKSTNYSQARYDEIVKEVSSFIKKIGYNPEKVAFVPISGWNGDNMLERSDKMEWYKGPTLLEALDAIVEPKRPHDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAG 272          

HSP 2 Score: 39.2762 bits (90), Expect = 6.751e-137
Identity = 22/52 (42.31%), Postives = 28/52 (53.85%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLVASHPK 1054
            F P  + TEVKSVEMHH       PG+  GF V+ + +  I   G+VA   K
Sbjct:  268 FAPAGLSTEVKSVEMHHEQLPEARPGDNVGFNVKNVSVKEI-KRGMVAGDSK 318          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_EUGGR (Elongation factor 1-alpha OS=Euglena gracilis GN=TEF PE=2 SV=1)

HSP 1 Score: 457.603 bits (1176), Expect = 1.984e-133
Identity = 226/271 (83.39%), Postives = 241/271 (88.93%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 911
            MGKEK HI++VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA+EM K SFKYAWVLDKLKAERER ITIDIALWKFET K   T+IDAPGHRDFIKNMITGTSQAD AVL+IDSTTGGFEAGISKDGQTREHALLA+TLGVKQMI   NK D  T KYS+ARY+EI KEVS YLKKVGYNPEKVPF+PISG+ GDNMIE S N+ WYKG TL+ ALDN+  PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG VVTF P+
Sbjct:    1 MGKEKVHISLVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEASEMGKGSFKYAWVLDKLKAERERCITIDIALWKFETAKSVFTIIDAPGHRDFIKNMITGTSQADAAVLVIDSTTGGFEAGISKDGQTREHALLAYTLGVKQMIVATNKFDDKTVKYSQARYEEIKKEVSGYLKKVGYNPEKVPFIPISGWNGDNMIEASENMGWYKGLTLIGALDNLEPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGDVVTFAPN 271          

HSP 2 Score: 40.0466 bits (92), Expect = 1.984e-133
Identity = 23/52 (44.23%), Postives = 29/52 (55.77%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLVASHPK 1054
            F P  + TEVKSVEMHH       PG+  GF V+ + +  I   G VAS+ K
Sbjct:  268 FAPNNLTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDI-RRGYVASNAK 318          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A2_RABIT (Elongation factor 1-alpha 2 OS=Oryctolagus cuniculus GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 2.389e-131
Identity = 221/282 (78.37%), Postives = 243/282 (86.17%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGP 908
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFETTKYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P YS+ RYDEIVKEVS+Y+KK+GYNP  VPFVPISG+ GDNM+E S N+ W+K            G +LL+ALD I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAP 282          

HSP 2 Score: 43.5134 bits (101), Expect = 2.389e-131
Identity = 25/63 (39.68%), Postives = 31/63 (49.21%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLVASHPKGRIHPGEAAHF 1087
            F P+ I TEVKSVEMHH       PG+  GF V+ + +  I  G +          P EAA F
Sbjct:  280 FAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSD--PPQEAAQF 340          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A2_HUMAN (Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 2.389e-131
Identity = 221/282 (78.37%), Postives = 243/282 (86.17%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGP 908
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFETTKYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P YS+ RYDEIVKEVS+Y+KK+GYNP  VPFVPISG+ GDNM+E S N+ W+K            G +LL+ALD I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAP 282          

HSP 2 Score: 43.5134 bits (101), Expect = 2.389e-131
Identity = 25/63 (39.68%), Postives = 31/63 (49.21%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLVASHPKGRIHPGEAAHF 1087
            F P+ I TEVKSVEMHH       PG+  GF V+ + +  I  G +          P EAA F
Sbjct:  280 FAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSD--PPQEAAQF 340          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 2.389e-131
Identity = 221/282 (78.37%), Postives = 243/282 (86.17%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGP 908
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFETTKYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P YS+ RYDEIVKEVS+Y+KK+GYNP  VPFVPISG+ GDNM+E S N+ W+K            G +LL+ALD I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAP 282          

HSP 2 Score: 43.5134 bits (101), Expect = 2.389e-131
Identity = 25/63 (39.68%), Postives = 31/63 (49.21%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLVASHPKGRIHPGEAAHF 1087
            F P+ I TEVKSVEMHH       PG+  GF V+ + +  I  G +          P EAA F
Sbjct:  280 FAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSD--PPQEAAQF 340          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A2_RAT (Elongation factor 1-alpha 2 OS=Rattus norvegicus GN=Eef1a2 PE=2 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 3.118e-131
Identity = 221/282 (78.37%), Postives = 243/282 (86.17%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGP 908
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFETTKYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P YS+ RYDEIVKEVS+Y+KK+GYNP  VPFVPISG+ GDNM+E S N+ W+K            G +LL+ALD I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAP 282          

HSP 2 Score: 43.1282 bits (100), Expect = 3.118e-131
Identity = 25/63 (39.68%), Postives = 31/63 (49.21%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLVASHPKGRIHPGEAAHF 1087
            F P+ I TEVKSVEMHH       PG+  GF V+ + +  I  G +          P EAA F
Sbjct:  280 FAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKAD--PPQEAAQF 340          
The following BLAST results are available for this feature:
BLAST of DY258266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A1_HORVU5.626e-15695.22Elongation factor 1-alpha OS=Hordeum vulgare PE=1 ... [more]
EF1A_SOLLC2.705e-15483.38Elongation factor 1-alpha OS=Solanum lycopersicum ... [more]
EF1A_PEA8.862e-15493.75Elongation factor 1-alpha OS=Pisum sativum PE=2 SV... [more]
EF1A_TOBAC1.028e-15382.28Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A_DICDI6.751e-13782.72Elongation factor 1-alpha OS=Dictyostelium discoid... [more]
EF1A_EUGGR1.984e-13383.39Elongation factor 1-alpha OS=Euglena gracilis GN=T... [more]
EF1A2_RABIT2.389e-13178.37Elongation factor 1-alpha 2 OS=Oryctolagus cunicul... [more]
EF1A2_HUMAN2.389e-13178.37Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF... [more]
EF1A2_BOVIN2.389e-13178.37Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]
EF1A2_RAT3.118e-13178.37Elongation factor 1-alpha 2 OS=Rattus norvegicus G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB3DE11ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258266 ID=DY258266; Name=DY258266; organism=Citrus clementina; type=EST; length=1312bp
GACTCTTTTACAATACACTCTCTCAATTTCCGAAGGGCGGCGAGAGAGAA
CCATTTTCGCGAATATCATTTTAATAAGGTTTTTTCTAGATTTGCCTAAT
GGGTAAGGAGAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACT
CTGGAAAGTCGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATT
GACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAA
GAGGTCATTCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTG
AACGTGGTATTACCATTGATATTGCTTTGTGGAAGTTCGAGACCACCAAG
TACTACTGCACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAA
CATGATTACCGGTACCTCACAGGCTGACTGTGCTGTCCTCATCATTGACT
CTACCACTGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGT
GAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTG
CTGTAACAAGATGGACGCCACCACCCCCAAGTATTCAAAGGCTAGGTACG
ATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGAAGGTTGGATACAAC
CCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTCGAGGGTGACAACAT
GATTGAGAGGTCTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGG
ACGCTCTTGACAATATCAATGAGCCGAAGAGGCCCTCAGACAAGCCCCTT
CGTCTGCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCC
AGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCCTGGTATGGTGGTGACTT
TTGGCCCCTCTGGATTGACACTGAGGTTAAGTCTGTTGAGATGCACCACA
ACCTCTGCAGGAGGCCCTTTCCGGGTGAAAAGGGTGGCTTTCAAGTGGAG
AAACTTTGCTTGTCAGGGATTCCAAGCGGGGGTTTGGTTGCTTCCCACCC
CAAAGGAAGAATCCACCCGGGGGAAGCTGCCCACTTTTCCCTCCCAGGGT
CATCCTCCTTAAACCCCCCCGGGCCAAAATTGAAAAAGGGAAATGCCCCC
CAGTTTCGTTGACTGGCCCCCCCCTCCCCCCATTTTGCCCCTCAAAGTTT
TTTCTTAAAACCCCCCTGGACAAAAAATTTTTGAAATAGGCCAAAATTCT
CGGCCAAAGGGGAAATCTTTTGGAAAAAAAAAGAACACCCCCACACATTT
TTTTCTTCTTTT
back to top