DY258266

Overview
NameDY258266
Unique NameDY258266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1312
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 1.458e-78
Identity = 138/267 (51.69%), Postives = 181/267 (67.79%), Query Frame = 3
Query:  108 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGP 908
            +K HIN+ V+GHVD+GKST  G L+Y+ G +D++  +  E+ A +M K  F +AW+LD+ K ERERG+TI+     FET K + T+ID PGHRDF+KNMI G SQAD A+ +I +  G FE  I   GQ REH  L  TLG++Q++   NKMD     Y + RY+++  EVS  LK +GY+P K+ FVP+S  +GDN+  +S+N  WY GPTLL+ LD    P RP+DKPLRLP+QDV+ I G GTV VGRVETGVLK G  V   P
Sbjct:   14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKGFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDVV--NYDQKRYEQVKSEVSKLLKLLGYDPSKIHFVPVSAVKGDNVRTKSSNTPWYNGPTLLEVLDTFQPPPRPTDKPLRLPIQDVFSITGAGTVVVGRVETGVLKAGDRVVVVP 278          

HSP 2 Score: 23.8682 bits (50), Expect = 1.458e-78
Identity = 10/39 (25.64%), Postives = 19/39 (48.72%), Query Frame = 2
Query:  923 EVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLV 1039
            +V+S+E HH    +  PG+  G  V  +    +  G ++
Sbjct:  284 DVRSIETHHMKLEQAQPGDNVGVNVRGINKEDVKRGDVL 322          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.459e-78
Identity = 142/275 (51.64%), Postives = 187/275 (68.00%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 914
            M K K  +N+  IGHVD+GKSTT G L+   G ID ++I R  KEA E  K  F++A+V+D LK ERERG+TID+A  KF T KY  T++D PGHRDFIKNMITG SQAD AVL+  +D    G +       QTREH  L  TLGV+Q+    NKMD  T  +S+A Y+E+ K +    LK +G+NPE++ FVP++   GDN+ ++S    WYKGPT+ + +D    P++P++ PLRLP+QDVY I G+GTVPVGRVETG++KPG  V F P+G
Sbjct:    1 MAKTKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERTPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVVFEPAG 267          

HSP 2 Score: 29.261 bits (64), Expect = 1.459e-78
Identity = 16/47 (34.04%), Postives = 22/47 (46.81%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLV 1039
            F P     E+K+VEMHH       PG+  GF V  +    I  G ++
Sbjct:  263 FEPAGAIGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVL 309          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 1.852e-78
Identity = 138/267 (51.69%), Postives = 185/267 (69.29%), Query Frame = 3
Query:  108 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGP 908
            +K H+N+ +IGHVD GKST TG L+ + G +D++     E EA ++ K  FKYAW++D+LK ERERG+TI+     FET KY+ T+ID PGHRDF+KNMI G SQAD A+L++ +  G FE+G+   GQTREH  LA+TLG++ +I   NKMD     Y + RY++I  E+S  LK + Y+  KVPF+P+S   GDN+  +S+N+ WY GP LL+ALD I  P RP DKPLRLP+QDV+ I G GTV  GRVE+GV+K G  +   P
Sbjct:   13 KKPHLNLAIIGHVDHGKSTLTGRLLLETGYVDEKAFAELEAEAKKLGKEDFKYAWIMDRLKEERERGVTIEAMHVGFETPKYFFTIIDLPGHRDFVKNMIVGASQADAALLVVSARPGEFESGVGPQGQTREHLFLAWTLGIRNLIVAVNKMDVV--NYDQKRYEQIKGELSKILKILRYDVNKVPFIPVSAVRGDNIKVKSSNMPWYNGPVLLEALDAIEPPPRPIDKPLRLPIQDVFSITGAGTVITGRVESGVVKVGDTIVALP 277          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.481e-78
Identity = 136/267 (50.94%), Postives = 183/267 (68.54%), Query Frame = 3
Query:  108 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGP 908
            +K HIN+ V+GHVD+GKST  G L+Y+ G +D++ ++  E+ A ++ K  F +AW+LD+ K ERERG+TI+     FET K + T+ID PGHRDF+KNMI G SQAD A+ +I +  G FEA I   GQ REH  L  TLGV+Q++   NKMD     Y + RY+++  EVS  LK +GY+P K+ F+P+S  +GDN+  +S+N  WY GPTLL+  D+   P+RP DKPLR+P+QDV+ I G GTV VGRVETGVLK G  V   P
Sbjct:   14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKALKEIEEMAKKIGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFEAAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDVV--NYDQKRYEQVKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNIKTKSSNTPWYTGPTLLEVFDSFQPPQRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKVGDRVVIVP 278          

HSP 2 Score: 24.6386 bits (52), Expect = 2.481e-78
Identity = 10/39 (25.64%), Postives = 19/39 (48.72%), Query Frame = 2
Query:  923 EVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLV 1039
            +V+S+E HH    +  PG+  G  V  +    +  G ++
Sbjct:  284 DVRSIETHHMKLEQAQPGDNIGVNVRGIAKEDVKRGDVL 322          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.236e-78
Identity = 142/275 (51.64%), Postives = 187/275 (68.00%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 914
            M K K  +N+  IGHVD+GKSTT G L+   G ID ++I R  KEA E  K  F++A+V+D LK ERERG+TID+A  KF T KY  T++D PGHRDFIKNMITG SQAD AVL+  +D    G +       QTREH  L  TLGV+Q+    NKMD  T  +S+A Y+E+ K +    LK +G+NPE++ FVP++   GDN+ ++S    WYKGPT+ + +D    P++P++ PLRLP+QDVY I G+GTVPVGRVETG++KPG  V F P+G
Sbjct:    1 MAKTKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERNPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYTITGVGTVPVGRVETGIIKPGDKVVFEPAG 267          

HSP 2 Score: 29.261 bits (64), Expect = 3.236e-78
Identity = 16/47 (34.04%), Postives = 22/47 (46.81%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLV 1039
            F P     E+K+VEMHH       PG+  GF V  +    I  G ++
Sbjct:  263 FEPAGAIGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVL 309          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.222e-78
Identity = 139/268 (51.87%), Postives = 184/268 (68.66%), Query Frame = 3
Query:  108 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 911
            +K H N+ +IGHVD GKST  G L+++ G + + VIE+  +EA E  K  F++A+V+D L  ERERG+TIDIA  +F+T  YY T++D PGHRDF+KNMITG SQAD AVL++ +  G          QTREH  LA TLG+ ++I   NKMD     YS+  Y+++  EV   LK+V +N     ++PIS FEGDN+ E S N  W+ GP+LL+AL+N+ EP+ P+D PLRLP+QDVY I GIGTVPVGRVETG + PG  V+F PS
Sbjct:    3 DKPHQNLAIIGHVDHGKSTLVGRLLFETGSVPEHVIEQHREEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFDTEDYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLARTLGINELIIGVNKMDIV--DYSEETYEDVKTEVDKLLKQVQFNANDAKYIPISAFEGDNVAESSDNTSWFDGPSLLEALNNLPEPQPPTDAPLRLPIQDVYTISGIGTVPVGRVETGTVSPGDDVSFQPS 261          

HSP 2 Score: 31.5722 bits (70), Expect = 4.222e-78
Identity = 17/44 (38.64%), Postives = 22/44 (50.00%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSG 1030
            F P  +  EVK+VEMHH    +  PG+  GF V  +    I  G
Sbjct:  258 FQPSDVGGEVKTVEMHHEEVDQAGPGDNVGFNVRGIGKDDIRRG 301          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 7.181e-78
Identity = 142/275 (51.64%), Postives = 185/275 (67.27%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 914
            M KEK  +N+  IGHVD+GKSTT G L+   G ID ++I R  KEA E  K  F++A+V+D LK ERERG+TID+A  KF T KY  T++D PGHRDFIKNMITG SQAD AVL+  +D    G +       QTREH  L+ TLG+ Q+    NKMD  T  +S+A Y+E+ K +    LK VG+NP+ + F+P++   GDN+ ++S N  WY GPTL   +D    P++P+  PLRLP+QDVY I G+GTVPVGRVETG++KPG  V F P+G
Sbjct:    1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLSRTLGITQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNIDFIPVASLLGDNVFKKSENTPWYNGPTLAQVIDGFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVVFEPAG 267          

HSP 2 Score: 29.261 bits (64), Expect = 7.181e-78
Identity = 16/47 (34.04%), Postives = 22/47 (46.81%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLV 1039
            F P     E+K+VEMHH       PG+  GF V  +    I  G ++
Sbjct:  263 FEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVL 309          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.222e-77
Identity = 141/275 (51.27%), Postives = 186/275 (67.64%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 914
            M KEK  +N+  IGHVD+GKSTT G L+   G ID ++I R +KEA E  K  F++A+V+D LK ERERG+TID+A  KF T KY  T++D PGHRDFIKNMITG SQAD A+L+  +D    G +       QTREH  L+ TLG+ Q+    NKMD  T  +S+A Y+E+ K +    LK VG+NP+ + FVP++   GDN+ ++S    WY GPTL + +D    P++P+  PLRLP+QDVY I G+GTVPVGRVETG++KPG  V F P+G
Sbjct:    1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLKKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNITFVPVASLHGDNVFKKSDKTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVIFEPAG 267          

HSP 2 Score: 29.261 bits (64), Expect = 1.222e-77
Identity = 16/47 (34.04%), Postives = 22/47 (46.81%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLV 1039
            F P     E+K+VEMHH       PG+  GF V  +    I  G ++
Sbjct:  263 FEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVL 309          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.535e-77
Identity = 140/275 (50.91%), Postives = 185/275 (67.27%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 914
            M KEK  +N+  IGHVD+GKSTT G L+   G ID ++I R  KEA E  K  F++A+V+D LK ERERG+TID+A  KF T KY  T++D PGHRDFIKNMITG SQAD A+L+  +D    G +       QTREH  L+ TLG+ Q+    NKMD  T  +S+A Y+E+ K +    LK VG+NP+ + FVP++   GDN+ ++S    WY GPTL + +D    P++P+  PLRLP+QDVY I G+GTVPVGRVETG+++PG  V F P+G
Sbjct:    1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNITFVPVASLHGDNVFKKSDKTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIRPGDKVIFEPAG 267          

HSP 2 Score: 29.261 bits (64), Expect = 3.535e-77
Identity = 16/47 (34.04%), Postives = 22/47 (46.81%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLV 1039
            F P     E+K+VEMHH       PG+  GF V  +    I  G ++
Sbjct:  263 FEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVL 309          
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.535e-77
Identity = 141/275 (51.27%), Postives = 184/275 (66.91%), Query Frame = 3
Query:   99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 914
            M KEK  +N+  IGHVD+GKSTT G L+   G ID ++I R  KEA E  K  F++A+V+D LK ERERG+TID+A  KF T KY  T++D PGHRDFIKNMITG SQAD A+L+  +D    G +       QTREH  L+ TLG+ Q+    NKMD  T  +S+A Y+E+ K +    LK VG+NP  + FVP++   GDN+ ++S    WY GPTL + +D    P++P+  PLRLP+QDVY I G+GTVPVGRVETG++KPG  V F P+G
Sbjct:    1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPANITFVPVASLHGDNVFKKSDRTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVIFEPAG 267          

HSP 2 Score: 29.261 bits (64), Expect = 3.535e-77
Identity = 16/47 (34.04%), Postives = 22/47 (46.81%), Query Frame = 2
Query:  899 FWPLWIDTEVKSVEMHHNLCRRPFPGEKGGFQVEKLCLSGIPSGGLV 1039
            F P     E+K+VEMHH       PG+  GF V  +    I  G ++
Sbjct:  263 FEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVL 309          
The following BLAST results are available for this feature:
BLAST of DY258266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_PYRAR1.458e-7851.69Elongation factor 1-alpha OS=Pyrobaculum arsenatic... [more]
EF1A_METVS1.459e-7851.64Elongation factor 1-alpha OS=Methanococcus vanniel... [more]
EF1A_CALMQ1.852e-7851.69Elongation factor 1-alpha OS=Caldivirga maquilinge... [more]
EF1A_PYRAE2.481e-7850.94Elongation factor 1-alpha OS=Pyrobaculum aerophilu... [more]
EF1A_METVA3.236e-7851.64Elongation factor 1-alpha OS=Methanococcus vanniel... [more]
EF1A_HALWD4.222e-7851.87Elongation factor 1-alpha OS=Haloquadratum walsbyi... [more]
EF1A_METMP7.181e-7851.64Elongation factor 1-alpha OS=Methanococcus maripal... [more]
EF1A_METM51.222e-7751.27Elongation factor 1-alpha OS=Methanococcus maripal... [more]
EF1A_METM73.535e-7750.91Elongation factor 1-alpha OS=Methanococcus maripal... [more]
EF1A_METM63.535e-7751.27Elongation factor 1-alpha OS=Methanococcus maripal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB3DE11ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258266 ID=DY258266; Name=DY258266; organism=Citrus clementina; type=EST; length=1312bp
GACTCTTTTACAATACACTCTCTCAATTTCCGAAGGGCGGCGAGAGAGAA
CCATTTTCGCGAATATCATTTTAATAAGGTTTTTTCTAGATTTGCCTAAT
GGGTAAGGAGAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACT
CTGGAAAGTCGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATT
GACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAA
GAGGTCATTCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTG
AACGTGGTATTACCATTGATATTGCTTTGTGGAAGTTCGAGACCACCAAG
TACTACTGCACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAA
CATGATTACCGGTACCTCACAGGCTGACTGTGCTGTCCTCATCATTGACT
CTACCACTGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGT
GAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTG
CTGTAACAAGATGGACGCCACCACCCCCAAGTATTCAAAGGCTAGGTACG
ATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGAAGGTTGGATACAAC
CCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTCGAGGGTGACAACAT
GATTGAGAGGTCTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGG
ACGCTCTTGACAATATCAATGAGCCGAAGAGGCCCTCAGACAAGCCCCTT
CGTCTGCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCC
AGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCCTGGTATGGTGGTGACTT
TTGGCCCCTCTGGATTGACACTGAGGTTAAGTCTGTTGAGATGCACCACA
ACCTCTGCAGGAGGCCCTTTCCGGGTGAAAAGGGTGGCTTTCAAGTGGAG
AAACTTTGCTTGTCAGGGATTCCAAGCGGGGGTTTGGTTGCTTCCCACCC
CAAAGGAAGAATCCACCCGGGGGAAGCTGCCCACTTTTCCCTCCCAGGGT
CATCCTCCTTAAACCCCCCCGGGCCAAAATTGAAAAAGGGAAATGCCCCC
CAGTTTCGTTGACTGGCCCCCCCCTCCCCCCATTTTGCCCCTCAAAGTTT
TTTCTTAAAACCCCCCTGGACAAAAAATTTTTGAAATAGGCCAAAATTCT
CGGCCAAAGGGGAAATCTTTTGGAAAAAAAAAGAACACCCCCACACATTT
TTTTCTTCTTTT
back to top