DY258266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_RICBR (Elongation factor Tu OS=Rickettsia bellii (strain RML369-C) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 88/269 (32.71%), Postives = 141/269 (52.42%), Query Frame = 3 Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 896 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + + EG E++ + L+DA+D+ I +P R ++KP +P++DV+ I G GTV GR+E G +K G V Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQALEGKPEGEKAIH-------ELMDAVDSYIPQPIRETEKPFLMPIEDVFSISGRGTVVTGRIEAGKVKVGEAV 244
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_RICB8 (Elongation factor Tu OS=Rickettsia bellii (strain OSU 85-389) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 88/269 (32.71%), Postives = 141/269 (52.42%), Query Frame = 3 Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 896 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + + EG E++ + L+DA+D+ I +P R ++KP +P++DV+ I G GTV GR+E G +K G V Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQALEGKPEGEKAIH-------ELMDAVDSYIPQPIRETEKPFLMPIEDVFSISGRGTVVTGRIEAGKVKVGEAV 244
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_FUSNN (Elongation factor Tu OS=Fusobacterium nucleatum subsp. nucleatum GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 109/338 (32.25%), Postives = 157/338 (46.45%), Query Frame = 3 Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGXXXXXXXXXXXXXXAGGPFRVKRVAFKWRNFACQGFQAGVWLLPTPKEESTRGKLPTFPSQGHP 1106 + K H+NI IGHVD GK+TTT I + + +K F +D E+ERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D + + + EV L + G+ + +P + S N E+ K L++A+DN I P+R D+P +P++DV+ I G GTV GRVE GV+K G +V P+ FR K + G GV L T KEE RG++ P HP Sbjct: 8 RSKPHVNIGTIGHVDHGKTTTTA------------AISKVLSDKGWASKVDFDQ---IDAAPEEKERGITINTAHIEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVYLNKSDMVE---DEELLELVEMEVRELLTEYGFPGDDIPVIRGSSLGALNGEEKWVE----KILELMEAVDNYIPTPERAVDQPFLMPIEDVFTITGRGTVVTGRVERGVIKVGEEIEIVGIKPTTKTTCTGVEM---------FR------KLLDQGQAGDNIGVLLRGTKKEEVERGQVLAKPGSIHP 301
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_DESVM (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 96/269 (35.69%), Postives = 134/269 (49.81%), Query Frame = 3 Query: 99 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 887 MGKEK H+NI IGH+D GK+T T I K+ G+ F +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ + +P + S + + + D LLDA D+ I EP+R DKP +P++DV+ I G GTV GRVE G++K G Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTA-AITKVAGL--------------RGNGKFVAFDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGGILVVAATDGPMP-------QTREHILLARQVGVPYLVVFLNKCDMVD---DEELLELVELEVRELLSLYGFPGDDIPVIRGSALKALE-TDDPNSADAAPVVALLDACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGIIKVG 243
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBM (Elongation factor Tu OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tuf1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 94/264 (35.61%), Postives = 138/264 (52.27%), Query Frame = 3 Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 887 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBL (Elongation factor Tu OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tuf1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 94/264 (35.61%), Postives = 138/264 (52.27%), Query Frame = 3 Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 887 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBK (Elongation factor Tu OS=Clostridium botulinum (strain Okra / Type B1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 94/264 (35.61%), Postives = 138/264 (52.27%), Query Frame = 3 Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 887 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBH (Elongation factor Tu OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 94/264 (35.61%), Postives = 138/264 (52.27%), Query Frame = 3 Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 887 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_CLOB1 (Elongation factor Tu OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 94/264 (35.61%), Postives = 138/264 (52.27%), Query Frame = 3 Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 887 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of DY258266 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPN (Elongation factor Tu OS=Chlamydia pneumoniae GN=tuf PE=3 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 1.301e-31 Identity = 91/263 (34.60%), Postives = 136/263 (51.71%), Query Frame = 3 Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-NMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 881 + K HINI IGHVD GK+T T + L G SF+ +D E+ RGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+S L++ GY + P + + EGD N IE+ L + DNI P+R DKP +P++DV+ I G GTV GR+E G++K Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAITRALSGD---------------GLASFRDYSSIDNTPEEKARGITINASHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKVDMISQEDAEL-IDLVEMELSELLEEKGY--KGCPIIRGSALKALEGDANYIEKVREL-------MQAVDDNIPTPEREIDKPFLMPIEDVFSISGRGTVVTGRIERGIVK 238 The following BLAST results are available for this feature:
BLAST of DY258266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258266 ID=DY258266; Name=DY258266; organism=Citrus clementina; type=EST; length=1312bpback to top |