DY258276

Overview
NameDY258276
Unique NameDY258276
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:329..1147. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.844e-59
Identity = 112/220 (50.91%), Postives = 151/220 (68.64%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMA-SAEEEFTWFLDKDATSKL 649
            G+F + LSGG LI  + KL+EPPY   ++WAKW+VFW DERVV K+HDDSNYKLA D  LSKV +   ++ +IND +SAE AA +YE  ++ + +S  +A S  +  P+FDL+LLGMG DGH+ASLFP HP L+  + WVTF+ DS KPPPERITFT PVINS+A + +V  G  K++A+  A+ +     +S  LP ++   +     WF+DK A SKL
Sbjct:   42 GAFCIVLSGGSLISFMGKLIEPPYDKIVDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDSHKPPPERITFTLPVINSAANVVVVATGESKANAIHLAIDDLPLPDSSLSLPARLVHPSNGNLIWFMDKQAGSKL 261          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.476e-57
Identity = 109/220 (49.55%), Postives = 146/220 (66.36%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAS-AEEEFTWFLDKDATSKL 649
            G F + LSGGPLI  +RKL E PY  +++W+KW++FW DER V K+H DS YK   + FLSKVPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:   63 GYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 3.476e-57
Identity = 109/220 (49.55%), Postives = 146/220 (66.36%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAS-AEEEFTWFLDKDATSKL 649
            G F + LSGGPLI  +RKL E PY  +++W+KW++FW DER V K+H DS YK   + FLSKVPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:   63 GYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGAEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_RAT (6-phosphogluconolactonase OS=Rattus norvegicus GN=Pgls PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.902e-37
Identity = 89/218 (40.83%), Postives = 122/218 (55.96%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            G F + LSGG L+  L + L      +    +A+W + + DER+VP DH +S Y L     LSK+PI    V  I+ AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFPGHPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L  +Q S L    +        WFLD+ A   L
Sbjct:   39 GRFALGLSGGSLVSMLARDLPAATAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTIDPALPVEDAAEDYARKLRQAFQGDTV--------PVFDLLILGVGPDGHTCSLFPGHPLLQEREKIVAPIGDSPKPPPQRVTLTLPVLNAAQSVIFVATGEGKAAVLKRIL-EDQESALPAAMVQPRTGALCWFLDEAAARLL 247          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_MOUSE (6-phosphogluconolactonase OS=Mus musculus GN=Pgls PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.518e-36
Identity = 89/219 (40.64%), Postives = 122/219 (55.71%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEE-EFTWFLDKDATSKL 649
            G F + LSGG L+  L + L      +    +A+W + + DER+VP DH +S Y L     LSK+PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  I  V  G GK++ ++  L + + +  LP  +         WFLD+ A   L
Sbjct:   39 GRFALGLSGGSLVSMLARDLPAAAAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAV--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEGT--LPAALVQPRTGALCWFLDEAAARLL 247          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_BOVIN (6-phosphogluconolactonase OS=Bos taurus GN=PGLS PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36
Identity = 86/216 (39.81%), Postives = 122/216 (56.48%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLLEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            FT+ LSGG L+  L + L      +     A+W + + DER+VP +H +S Y L     LSK+PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L + + + L    +  +  +  WFLD+ A   L
Sbjct:   41 FTLGLSGGSLVSMLARELPAAAAPAGPASLARWTLGFCDERLVPFEHAESTYGLYRTHLLSKLPIFDSQVITINPALPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIYVATGEGKAAILKRILEDKEENPLPAALVQPSAGKLCWFLDEAAARLL 248          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_HUMAN (6-phosphogluconolactonase OS=Homo sapiens GN=PGLS PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.679e-35
Identity = 84/216 (38.89%), Postives = 119/216 (55.09%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLLEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            F + LSGG L+  L + L      +     A+W + + DER+VP DH +S Y L     LS++PI    V  IN  L  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L + + + L    +     +  WFLD+ A   L
Sbjct:   41 FALGLSGGSLVSMLARELPAAVAPAGPASLARWTLGFCDERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFLDEAAARLL 248          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCTU (6-phosphogluconolactonase OS=Mycobacterium tuberculosis GN=pgl PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.019e-32
Identity = 88/214 (41.12%), Postives = 114/214 (53.27%), Query Frame = 2
Query:   14 VFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            V   GG  I  LR L        IEW+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+ AV  A+G   +   +P   A   +   W LD+DA +KL
Sbjct:   39 VLTGGGNGIALLRYL--SAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG-GADPVSVPAAGAVGRQNTLWLLDRDAAAKL 245          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCBO (6-phosphogluconolactonase OS=Mycobacterium bovis GN=pgl PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.019e-32
Identity = 88/214 (41.12%), Postives = 114/214 (53.27%), Query Frame = 2
Query:   14 VFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            V   GG  I  LR L        IEW+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+ AV  A+G   +   +P   A   +   W LD+DA +KL
Sbjct:   39 VLTGGGNGIALLRYL--SAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG-GADPVSVPAAGAVGRQNTLWLLDRDAAAKL 245          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_SCHPO (Probable 6-phosphogluconolactonase OS=Schizosaccharomyces pombe GN=SPCC16C4.10 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.870e-32
Identity = 84/225 (37.33%), Postives = 119/225 (52.89%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLA-------YDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEE--EFTWFLDKDATSKL 649
            G FT+ LSGG L   L + L       IE++KW VF+ DER+VP D ++SNY L        ++GF  K   T        + +  +  A++YE  L H     + A S+    P FDL+LLG GPDGH  SLFP H +L+E+  WV  + DSPKPP +RIT T PV+  +  IA V  GAGK   +   +     +  LP  + +       +WF+D +A++ L
Sbjct:   32 GVFTLALSGGSLPKVLAEGLAQQR--GIEFSKWEVFFADERIVPLDDENSNYALCKKLIFDKFEGFDPKKIHTINPELLKENPIDPQNVADEYEKQLVH-----VFANSSTVKVPVFDLLLLGCGPDGHTCSLFPDHEVLQEDVAWVAPVTDSPKPPKDRITLTLPVVTHAQAIAFVTTGAGKKDILPIVI--EDFTSKLPSALITRNNLTRTSWFVDDEASANL 247          
The following BLAST results are available for this feature:
BLAST of DY258276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
6PGL1_ARATH2.844e-5950.91Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL1_ORYSJ3.476e-5749.55Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI3.476e-5749.55Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL_RAT8.902e-3740.836-phosphogluconolactonase OS=Rattus norvegicus GN=... [more]
6PGL_MOUSE1.518e-3640.646-phosphogluconolactonase OS=Mus musculus GN=Pgls ... [more]
6PGL_BOVIN1.983e-3639.816-phosphogluconolactonase OS=Bos taurus GN=PGLS PE... [more]
6PGL_HUMAN1.679e-3538.896-phosphogluconolactonase OS=Homo sapiens GN=PGLS ... [more]
6PGL_MYCTU1.019e-3241.126-phosphogluconolactonase OS=Mycobacterium tubercu... [more]
6PGL_MYCBO1.019e-3241.126-phosphogluconolactonase OS=Mycobacterium bovis G... [more]
6PGL_SCHPO3.870e-3237.33Probable 6-phosphogluconolactonase OS=Schizosaccha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DH04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258276 ID=DY258276; Name=DY258276; organism=Citrus clementina; type=EST; length=819bp
GGGCTCCTTCACTGTCTTCTTATCCGGTGGTCCTCTCATCGACTCCCTCA
GGAAATTATTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAATGG
CATGTGTTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAG
CAATTATAAGCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAATTACCA
CTGGCAATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCT
GAAGATTATGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGC
TACATCTGCTGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTA
TGGGTCCAGATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTC
AAGGAGAATGAAAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCCACC
TCCAGAGAGAATCACTTTCACCTTCCCTGTAATCAACTCATCTGCATATA
TTGCAATGGTGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACTGCA
TTGGGTAATAATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATCGGC
TGAAGAAGAATTTACTTGGTTTCTTGACAAAGACGCGACTTCAAAGCTGT
AAGAGTCGGAACAATTAGCTGTATGCGTGAATCCCTGTTATCTGCTATGA
TAATTGGTTTGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTTTGTT
AGTAATGAGAAAAGAGTGAACTTGTTAATGCAAGTGAAAAAGATTTGAAT
AAATATAGTTTGATATTTT
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