DY258276

Overview
NameDY258276
Unique NameDY258276
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:329..1147. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCLE (6-phosphogluconolactonase OS=Mycobacterium leprae GN=pgl PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.165e-28
Identity = 73/191 (38.22%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   83 IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP--KFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            I+W++ H+FW DER VPKD D+ N K A    L  + I    V+ +       G   D E     L    +LA  AA G+P   FD+ L+GMGP+GHI SLFP    ++E  + V  +++SPKPPPERIT T   I  S  + ++V G  K+ AV  A+G   ++  +P   A   E   W LD++A +K+
Sbjct:   60 IDWSRVHLFWGDERYVPKDDDERNEKQARVALLDHIDIPPSQVHPMPAGDGEFG--NDLEAAA--LAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNTVAVRETSRMVVGVRNSPKPPPERITLTLNAIQRSREVWLMVSGTAKADAVAAAMGGAPSAS-IPAAGAVGLETTLWLLDEEAAAKI 245          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: SOL3_YEAST (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae GN=SOL3 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 78/223 (34.98%), Postives = 118/223 (52.91%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLL--EPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASA--EEEFTWFLDKDATSKL 649
            F V +SGG LID+L + L  +      ++W+KW +++ DER+VP    DSNY       L K+P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K + +      +  +D LP  + +    E+ +WF++++A  K+
Sbjct:   35 FKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIF--DLKNDQLPTALVNKLFGEKTSWFVNEEAFGKV 244          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS7 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain YJM789) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 78/223 (34.98%), Postives = 118/223 (52.91%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLL--EPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASA--EEEFTWFLDKDATSKL 649
            F V +SGG LID+L + L  +      ++W+KW +++ DER+VP    DSNY       L K+P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K + +      +  +D LP  + +    E+ +WF++++A  K+
Sbjct:   35 FKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIF--DLKNDQLPTALVNKLFGEKTSWFVNEEAFGKV 244          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS6 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 78/223 (34.98%), Postives = 118/223 (52.91%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLL--EPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASA--EEEFTWFLDKDATSKL 649
            F V +SGG LID+L + L  +      ++W+KW +++ DER+VP    DSNY       L K+P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K + +      +  +D LP  + +    E+ +WF++++A  K+
Sbjct:   35 FKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIF--DLKNDQLPTALVNKLFGEKTSWFVNEEAFGKV 244          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS1 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 78/223 (34.98%), Postives = 118/223 (52.91%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLL--EPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASA--EEEFTWFLDKDATSKL 649
            F V +SGG LID+L + L  +      ++W+KW +++ DER+VP    DSNY       L K+P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K + +      +  +D LP  + +    E+ +WF++++A  K+
Sbjct:   35 FKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIF--DLKNDQLPTALVNKLFGEKTSWFVNEEAFGKV 244          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_DROME (Probable 6-phosphogluconolactonase OS=Drosophila melanogaster GN=CG17333 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.174e-26
Identity = 74/182 (40.66%), Postives = 103/182 (56.59%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSA-EGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPL-LKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQT 547
            F+V LSGG L+  L K L+     +++ AKW  F+ DER V  D  DS Y      +L+++P    + +   D     +  A DYE  +K             +   +FDL+LLGMGPDGH  SLFP  P  L+E ++ V  I++SPKPPPERITFT P+IN +  +A VV GA K+S V++
Sbjct:   41 FSVGLSGGSLVQLLTKALKSC---NLKTAKWVFFFCDERYVRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVK-------------SQVDRFDLLLLGMGPDGHTCSLFPEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNVAFVVTGAAKASVVKS 206          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_STRCO (6-phosphogluconolactonase OS=Streptomyces coelicolor GN=pgl PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.070e-26
Identity = 76/222 (34.23%), Postives = 114/222 (51.35%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLE-PPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDA-----LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            GS +V L+GG   + L   L   P  D+I+W++  ++W DER +P+   + N   A    L  VP+    V+A+  +        E AA  Y    + L  +++    AA   P FD++LLG+GPD H+ASLFP HP ++E E+ V  +  SPKPPP RI+ T P I ++  + ++  G  K++AV  AL +       P   A       W LD  A S+L
Sbjct:   36 GSASVVLTGGRNGNGLLAALAGSPARDAIDWSRLDLWWGDERFLPEGDPERNVTQAQQALLDSVPLDPKRVHAMAASDGPYGSDVEAAAAAYA---QELATASVPENHAAV--PSFDVLLLGVGPDTHVASLFPEHPGVRETERTVIGVHGSPKPPPIRISLTLPAIRAAREVWLLAAGEDKANAVAMAL-SGAGEIQAPAAGARGRARTLWLLDSAAASQL 251          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_SYNY3 (6-phosphogluconolactonase OS=Synechocystis sp. (strain PCC 6803) GN=pgl PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26
Identity = 78/220 (35.45%), Postives = 108/220 (49.09%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAI-NDALSAEGAAEDYETCLKHLTKSNILAT---SAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            G  T+ LSGG   ++ + L E     ++ W K HVFW DER V  DH DSN ++A   +L +V I   N++ +   A   E  A+ YE         N LAT     A  FP FDL+LLG+G DGH ASLFP  P L   ++ +T      +P   R+TFT P+IN +  +  +V GA K  A+        +    P +    + E  W LD+ A   L
Sbjct:   34 GQGTIALSGG---NTPKPLYEALARQALPWEKIHVFWGDERYVSVDHPDSNQRMARLAWLDQVDIPEANIHPMPTAAADPEQDAQTYE---------NELATFFQVEAGHFPAFDLILLGLGDDGHTASLFPHTPALTVGDRLITVGNKDGQP---RLTFTIPLINRARSVVFLVAGASKQHALGEIFAPEADPQQYPARFIQPQGELIWLLDQQAGENL 238          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_ANASP (6-phosphogluconolactonase OS=Anabaena sp. (strain PCC 7120) GN=pgl PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.575e-25
Identity = 76/221 (34.39%), Postives = 107/221 (48.42%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAI-----NDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            G FT+ LSGG    + + L E      + W K HVFW DER V  DH DSN  +A   +L +V I   N++A+     N A+SA    +  +T             SA   FP  D++LLGMG D H ASLFP    L+  ++ +T       P   RITFT+P IN+++ +  VV GA K  A+      + +    P +    + E  W LD  A ++L
Sbjct:   34 GRFTIALSGG---STPKPLYEAIAAQKLPWDKIHVFWGDERYVSPDHPDSNELMARTAWLDRVDIPAENIHAVPTLDNNPAVSAAKYEQHLQT----------FFNSAPGEFPALDVVLLGMGDDAHTASLFPHTEALQVRDRLITVGNKDGNP---RITFTYPFINAASSVIFVVAGANKRPALAQVFAPSADDLAYPSRFIQPQGELLWLLDAAAGAEL 238          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: SOL1_YEAST (6-phosphogluconolactonase-like protein 1 OS=Saccharomyces cerevisiae GN=SOL1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.509e-25
Identity = 77/216 (35.65%), Postives = 110/216 (50.93%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPIT---TGNVYAINDAL--SAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPG-HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDA 637
            F + LSGG LI  L + L     D ++W KW +++ DER+VP    +SNY LA       +      T  +Y I+++L    +  A++YE   K L K    A   +   P FDL LLG  PDGHIASLFP     L+EN  WV  ++++P  P  RI+ T PVI  S  +  VV GA K+  ++T +   +      +    A    +WF+D DA
Sbjct:   92 FKIALSGGSLIQVLHEGLLKR--DDVQWGKWDIYFADERLVPFSSSESNYGLAKRKIFDLIDTEKYGTPKIYHIDESLINDPQECADNYE---KILIKG--FAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQENLRENLAWVIPVENAPSGPSNRISLTIPVICHSHRVTFVVEGATKAPVIKTIMERPEKGLPSSIVNEGAAGRVSWFVDDDA 300          
The following BLAST results are available for this feature:
BLAST of DY258276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
6PGL_MYCLE1.165e-2838.226-phosphogluconolactonase OS=Mycobacterium leprae ... [more]
SOL3_YEAST8.352e-2734.986-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS78.352e-2734.986-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS68.352e-2734.986-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS18.352e-2734.986-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
6PGL_DROME3.174e-2640.66Probable 6-phosphogluconolactonase OS=Drosophila m... [more]
6PGL_STRCO7.070e-2634.236-phosphogluconolactonase OS=Streptomyces coelicol... [more]
6PGL_SYNY39.234e-2635.456-phosphogluconolactonase OS=Synechocystis sp. (st... [more]
6PGL_ANASP1.575e-2534.396-phosphogluconolactonase OS=Anabaena sp. (strain ... [more]
SOL1_YEAST3.509e-2535.656-phosphogluconolactonase-like protein 1 OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DH04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258276 ID=DY258276; Name=DY258276; organism=Citrus clementina; type=EST; length=819bp
GGGCTCCTTCACTGTCTTCTTATCCGGTGGTCCTCTCATCGACTCCCTCA
GGAAATTATTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAATGG
CATGTGTTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAG
CAATTATAAGCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAATTACCA
CTGGCAATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCT
GAAGATTATGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGC
TACATCTGCTGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTA
TGGGTCCAGATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTC
AAGGAGAATGAAAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCCACC
TCCAGAGAGAATCACTTTCACCTTCCCTGTAATCAACTCATCTGCATATA
TTGCAATGGTGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACTGCA
TTGGGTAATAATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATCGGC
TGAAGAAGAATTTACTTGGTTTCTTGACAAAGACGCGACTTCAAAGCTGT
AAGAGTCGGAACAATTAGCTGTATGCGTGAATCCCTGTTATCTGCTATGA
TAATTGGTTTGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTTTGTT
AGTAATGAGAAAAGAGTGAACTTGTTAATGCAAGTGAAAAAGATTTGAAT
AAATATAGTTTGATATTTT
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