DY258276

Overview
NameDY258276
Unique NameDY258276
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:329..1147. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: SOL2_YEAST (6-phosphogluconolactonase-like protein 2 OS=Saccharomyces cerevisiae GN=SOL2 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23
Identity = 74/216 (34.26%), Postives = 107/216 (49.54%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPIT---TGNVYAINDALSAEGAAEDYETCLKHLTKSNI--LATSAATGFPKFDLMLLGMGPDGHIASLFPG-HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDA 637
            F + LSGG LI+ L + L     D + W  W +++ DER+VP   ++SNY  A    L  +      T  VY I+++L      +D + C  +  K  I   A   +   P FDL LLG  PDGHIASLFP     L+E   WV  ++++P  P  RI+ T PVI  S  +  VV GA K+  ++T +   +      +    A    +WF+D DA
Sbjct:   88 FKIALSGGSLIEVLHEGLLKR--DDVRWGDWDIYFADERLVPFSSNESNYGCAKRKILDLIDTAKYGTPKVYHIDESL-----IDDPQECADNYEKVLIRGFAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQDNLREKLAWVVPVENAPSGPSTRISLTIPVICHSHRVTFVVEGATKAPIIKTIMERPEKGLPSSIVNEGAAGRVSWFVDDDA 296          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_THEMA (6-phosphogluconolactonase OS=Thermotoga maritima GN=pgl PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.015e-21
Identity = 67/208 (32.21%), Postives = 98/208 (47.12%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDK 631
            F V   G   +    KL E  +     W + H F  DER VP D D SN++   +   S+  I +GNV+ ++ +L  E A E YE  ++  T              +FDL +LGMGPDGH+AS+F      K+N   VTF   S  P   R+T TF  +N+S Y+  ++ G  K + +   L +      LP      +E+  WF+ K
Sbjct:   36 FVVLAGGRTPLPVYEKLAEQKF----PWNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSAT-------------DQFDLAILGMGPDGHVASIFDLETGNKDN--LVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDTP----LPAYFVRGKEKTVWFVGK 220          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: SOL4_YEAST (6-phosphogluconolactonase 4 OS=Saccharomyces cerevisiae GN=SOL4 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20
Identity = 74/232 (31.90%), Postives = 117/232 (50.43%), Query Frame = 2
Query:    8 FTVFLSGGPLIDSLRKLL--EPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGN-------VYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP-KFDLMLLGMGPDGHIASLFPG---HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTAL--GNNQNSDLLPVQMASAEEEFTWFLDKDATSKL*ES 658
            F + +SGG +  +L + L  +      I+W +W +F+ DER+VP +   SNY       L  + +  GN       VY IN++L   G            T +  +A   A+  P  FDL+LLG G DGH  SLFPG   + L++E ++ V +  +SPK P +RITFT  V+  +  +  +V GA K + +   L   N++   +L  +M     + TWFLD +A + + E+
Sbjct:   37 FNIAISGGSMNQALYESLVNDKNIFPHIKWPQWRIFFCDERLVPFEDPQSNYGQFKKTVLDPL-VHQGNQLNLGPTVYTINESLIGGGE-----------TANRKIAEEYASMLPASFDLILLGCGEDGHTCSLFPGVEFNYLVEEMDRKVLWCNNSPKAPKDRITFTLAVVAEAKSVCFLVRGAAKKAIMHDVLIVKNSELPSVLVNEMVGT--KVTWFLDDEAGALIPEN 254          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_CAEEL (Putative 6-phosphogluconolactonase OS=Caenorhabditis elegans GN=Y57G11C.3 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20
Identity = 66/217 (30.41%), Postives = 105/217 (48.39%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEG-AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEK--WVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATS 643
            G+ ++ +SGG +     K +     + + W +  +F VDER V  D ++SN       +L   P    +V+            A+ YE  L+       L  +A     +FD++ LG+GPDGH AS+FPG   L++  +  WV+ I DSPKPPP RIT T   +  +  +A ++CG  K+  V+     +Q       Q     ++ T FLD+DA +
Sbjct:   46 GTVSIGVSGGSMPRVFSKAILSLPQEQLNWKRIRIFMVDERNVDLDSEESNQ----GEYLRLFPNELRDVFVPMQIFKDPCLTAQHYEISLRKYLLPEQLNNTA-----RFDILFLGVGPDGHTASIFPGKERLEKITELNWVSVITDSPKPPPSRITLTLQTLQHAKNVAFIICGKQKAEIVRGICDRDQKYP--AAQARPFNDKLTLFLDEDAAT 251          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16
Identity = 61/213 (28.64%), Postives = 103/213 (48.36%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ-MASAEEEFTWFLDKDA 637
            G F + LSGG    +L + L   +  S  WA  H++ VDER VP    DSN++      L  V +   N++ +   L     AE+ +    + ++ + L  +++     FDL+LLGMG DGH ASLFP  P   + ++ V  + +SP  P +R++ + P+IN +  +A++V G  K                 P+  +     +  W++D +A
Sbjct:  581 GKFHLALSGGSSPIALFQQLATGHY-SFPWAHTHLWLVDERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANSS-----FDLVLLGMGTDGHTASLFPQSPTGLDGDQLVV-LTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTKREITTLVSRVGHEPKKWPISGVVPLSGQLVWYMDYEA 786          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15
Identity = 62/213 (29.11%), Postives = 99/213 (46.48%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ-MASAEEEFTWFLDKDA 637
            G F + LSGG    +L + L   +     WA  H++ VDER VP    +SN++      L  V I   N++ +   L     AE+ +    +  + + L  +++     FDL+LLGMG DGH ASLFP  P   + E+ V  +  SP  P  R++ + P+IN +  +A++V G  K                 P+  +     +  W++D DA
Sbjct:  583 GQFHLALSGGSSPVALFQQLATAHY-GFPWAHTHLWLVDERCVPLSDPESNFQGLQAHLLQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANSS-----FDLVLLGMGADGHTASLFPQSPTGLDGEQLVV-LTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMKREITTLVSRVGHEPKKWPISGVLPHSGQLVWYMDYDA 788          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_PSEPU (6-phosphogluconolactonase OS=Pseudomonas putida GN=pgl PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15
Identity = 64/197 (32.49%), Postives = 93/197 (47.21%), Query Frame = 2
Query:    2 GSFTVFLSGGPL-IDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKD----SPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDL 577
            G   V LSGG   +  L KL   P    ++WAK  V   DER VP +H DSN  L     L+        V     A + + AA              + A  A TG P  D+++LGMG DGH ASLFP  P L+      +  +     +P  P +R++ T  ++ S+A+IA+ V G GK + ++ AL  N  +++
Sbjct:   48 GQACVVLSGGRSPVPFLEKLASEP----LDWAKVTVSLADERWVPVEHADSNAGLLARHLLTGAAAKARFVGLYQQAENLDAAA--------------LKADQALTGLPPIDVLVLGMGDDGHTASLFPASPNLEAGLDLASTRRCLPLLAPSVPHQRLSMTRSLLASAAFIALSVQGPGKLATLRAALAGNDLTEM 226          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_AGGAC (6-phosphogluconolactonase OS=Aggregatibacter actinomycetemcomitans GN=pgl PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13
Identity = 59/214 (27.57%), Postives = 91/214 (42.52%), Query Frame = 2
Query:   14 VFLSGGPLIDSLRKLL-EPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFT-WFLDKDATSKL 649
            + LSGG     L K L + PY + I W   H +W D+R+V     +SNY          + I   N++ I          + ++  L  +    +           FD ++LGMG DGH +SLFP H    ++E  +  I   P+    RI+ T  +I  +  I  +V G GK+  ++        +   P     A+   T W+LDKDA   L
Sbjct:   32 ISLSGGSTPKLLFKTLAQSPYAEQINWRNLHFWWGDDRMVSPSDPESNYGEVQKLLFDHIQIPAENIHRIRGENEPHFELKRFQAELSAVISDGV-----------FDWIILGMGADGHTSSLFP-HQTNFDDEN-LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGEGKAEILKEIQSTPAENLPYPAAKIYAKNGVTEWYLDKDAAKLL 232          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_TREPA (6-phosphogluconolactonase OS=Treponema pallidum GN=pgl PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.255e-13
Identity = 48/170 (28.24%), Postives = 76/170 (44.71%), Query Frame = 2
Query:   20 LSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 529
            LSGG     + +     +   ++W +   FW DER VP     SN+ + +   L  + I    V+ +    + E A   Y   ++              G P FD++LLGMG DGH AS+FP H +   +      +   P    +R++FT  +IN++  I +VV G  K
Sbjct:   34 LSGGSTPREIFRTWAHEFRHHLDWKRLRFFWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIE-------ARLPRQRGVPCFDIILLGMGADGHTASIFP-HEIELWDHSGCCVVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREK 195          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL_HAEIN (6-phosphogluconolactonase OS=Haemophilus influenzae GN=pgl PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.964e-13
Identity = 60/214 (28.04%), Postives = 91/214 (42.52%), Query Frame = 2
Query:   14 VFLSGGPLIDSLRKLL-EPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFT-WFLDKDATSKL 649
            + LSGG     L K L + PY + I W   H +W D+R+VP    +SNY          + I   N++ I          + +E  L  +  + +           FD ++LGMG DGH ASLFP H    ++E  +  I   P+    RI+ T  +I  +  I  +V G  K+  ++        +   P     A+   T W+LDK A   L
Sbjct:   32 ISLSGGSTPKLLFKTLAKSPYAEQINWKNLHFWWGDDRMVPPSDPESNYGEVQKLLFDHIQIPAENIHRIRGENEPHFELKRFEEELSAVIPNGV-----------FDWIILGMGIDGHTASLFP-HQTNFDDEN-LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGESKADILKEIQTTPAENLPYPAAKIKAKNGVTEWYLDKAAVRLL 232          
The following BLAST results are available for this feature:
BLAST of DY258276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
SOL2_YEAST1.129e-2334.266-phosphogluconolactonase-like protein 2 OS=Saccha... [more]
6PGL_THEMA4.015e-2132.216-phosphogluconolactonase OS=Thermotoga maritima G... [more]
SOL4_YEAST1.992e-2031.906-phosphogluconolactonase 4 OS=Saccharomyces cerev... [more]
6PGL_CAEEL1.992e-2030.41Putative 6-phosphogluconolactonase OS=Caenorhabdit... [more]
G6PE_MOUSE2.280e-1628.64GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
G6PE_HUMAN1.131e-1529.11GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
6PGL_PSEPU1.131e-1532.496-phosphogluconolactonase OS=Pseudomonas putida GN... [more]
6PGL_AGGAC2.359e-1327.576-phosphogluconolactonase OS=Aggregatibacter actin... [more]
6PGL_TREPA5.255e-1328.246-phosphogluconolactonase OS=Treponema pallidum GN... [more]
6PGL_HAEIN8.964e-1328.046-phosphogluconolactonase OS=Haemophilus influenza... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DH04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258276 ID=DY258276; Name=DY258276; organism=Citrus clementina; type=EST; length=819bp
GGGCTCCTTCACTGTCTTCTTATCCGGTGGTCCTCTCATCGACTCCCTCA
GGAAATTATTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAATGG
CATGTGTTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAG
CAATTATAAGCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAATTACCA
CTGGCAATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCT
GAAGATTATGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGC
TACATCTGCTGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTA
TGGGTCCAGATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTC
AAGGAGAATGAAAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCCACC
TCCAGAGAGAATCACTTTCACCTTCCCTGTAATCAACTCATCTGCATATA
TTGCAATGGTGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACTGCA
TTGGGTAATAATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATCGGC
TGAAGAAGAATTTACTTGGTTTCTTGACAAAGACGCGACTTCAAAGCTGT
AAGAGTCGGAACAATTAGCTGTATGCGTGAATCCCTGTTATCTGCTATGA
TAATTGGTTTGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTTTGTT
AGTAATGAGAAAAGAGTGAACTTGTTAATGCAAGTGAAAAAGATTTGAAT
AAATATAGTTTGATATTTT
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