DY258278

Overview
NameDY258278
Unique NameDY258278
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length603
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15270 contig Ccv1_Contig15270:329..931. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19
Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF S+P ADA+FMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP   + S  T+ ++  D  +M  +   GK RT++EF  L   AGF         +   ++EF+K
Sbjct:  248 GGDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDA-IMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ VM  +   GK RTEQEF  L   +GF  +R     +   ++EF K
Sbjct:  249 GGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDV-VMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RTE+EF  L   AGF         +   ++EF+K
Sbjct:  249 GGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDV-IMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D  +M  +   GK RTE+EF  L + AGF   +     +   ++EF K
Sbjct:  254 GGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDA-IMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.166e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RTE+EF  L   AGF         +   ++EF+K
Sbjct:  249 GGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDV-IMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.829e-19
Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY++LP  GK+I  E +LP+  + S  T+ ++  D  +M  +   GK RTE+EF  L  ++GF  ++     +   L+E  K
Sbjct:  247 GGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDC-IMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.829e-19
Identity = 48/116 (41.38%), Postives = 66/116 (56.90%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RTEQEF  L   AGF         +   ++EF K
Sbjct:  249 GGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDV-IMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.829e-19
Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E VLP+  +    T+ ++  D+ +M  +   GK RTE+EF  L  +AGF         Y   ++E  K
Sbjct:  247 GGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDV-IMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19
Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF  +P  DAIF+KW+   W+D+ C  +++NCY ALP  GK+I  E +LP   + S  T+ ++  D  +M  Y   GK RTE+EF  L +++GF   +     +   ++EF K
Sbjct:  252 GGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDA-LMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366
[Close]
BLAST of DY258278 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 2 
Query:    2 GGDMFFSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNKSQRTRALLEGDIFVMTIYRAKGKHRTEQEFNQLGLSAGFPHLRAFYVDYFHTLLEFQK 349
            GGDMF S+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++    + + +   D+ +M  +   G+ R E+EF+ L   AGF   +A Y+      +EF K
Sbjct:  248 GGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDM-IMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362
The following BLAST results are available for this feature:
BLAST of DY258278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
COMT3_POPKI1.270e-1939.66Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_ROSCH1.270e-1942.24Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_POPTM1.270e-1940.52Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CLABR1.270e-1940.52Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_POPKI2.166e-1940.52Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
OMT1_ARATH2.829e-1938.79Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_PRUDU2.829e-1941.38Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_OCIBA2.829e-1940.52Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
IEMT_CLABR4.825e-1938.79(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_SACOF4.825e-1940.52Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258278 ID=DY258278; Name=DY258278; organism=Citrus clementina; type=EST; length=603bp
TGGTGGGGACATGTTTTTTTCCATTCCTGCCGCTGATGCTATCTTTATGA
AGTGGGTTTTAACTACATGGACTGACGATGAATGCAAGCTGATAATGGAG
AACTGTTACAAGGCTCTTCCGGCAGGAGGAAAACTGATTGCTTGTGAGCC
CGTGCTGCCTGATGATTCAAACAAGAGTCAAAGGACGCGTGCTCTCTTAG
AAGGGGACATTTTTGTAATGACCATCTACAGGGCCAAAGGTAAACACAGG
ACTGAACAAGAGTTTAACCAACTTGGTCTCTCTGCTGGTTTTCCACACTT
GAGAGCTTTTTATGTCGATTATTTTCACACTCTTCTTGAGTTCCAAAAGT
AATTTTAGTTTCTGGATCCTTAAAAGACTTGGGGAATATTTGTGATGGAC
TGTGGTTGCCTAGGATGGAATAACTTGCTATGAATTATAAATGTTGAGTA
GGCGGTTAGCGCTAGCTGCCTACCAAAAAAAAAAAAGAAACGATTTATCA
TTAACATAAATTATTGAGCTCATATTTCATAGACATGTATTTTGTATATT
GAGCTCACTCCATTGAACTCATATCTCATAGATATGTATTTCTTTTTCCT
TTG
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