DY258282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHYB_TOBAC (Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.920e-16 Identity = 36/75 (48.00%), Postives = 57/75 (76.00%), Query Frame = 2 Query: 8 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 232 + +VH+EFRI P G+P +L+ DMF+ S+ ++EGLGL + +K++KLMNG +QYIRE+ER FLI+++ P+ + Sbjct: 1052 VTVVHIEFRIVCPGEGLPPELVQDMFHSSRWVTKEGLGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMTRR 1126
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHYA_PETCR (Phytochrome A OS=Petroselinum crispum GN=PHYA PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16 Identity = 38/80 (47.50%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 2 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 241 +++ +VHLEFRITH G+PE+ + MF S EG+ L IS+KLVKLMNG V Y+REA +S+F+I +E A ++++ Sbjct: 1050 QSVQLVHLEFRITHTGAGVPEEAVSQMFGSDSETSEEGISLLISRKLVKLMNGDVHYLREAGKSTFIITVELAAASKRES 1129
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHYB_SOYBN (Phytochrome B OS=Glycine max GN=PHYB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.449e-15 Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 14 IVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 232 ++H EFR+ P G+P +LI DMF +S+ ++EGLGL +S+K++KLMNG VQYIREAER F +L+E P+ + Sbjct: 1079 LLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQYIREAERCYFYVLLELPVTRR 1151
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHYB_SOLTU (Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15 Identity = 35/75 (46.67%), Postives = 56/75 (74.67%), Query Frame = 2 Query: 8 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 232 + +VH+E RI P G+P +L+ DMF+ S+ ++EGLGL + +K++KLMNG +QYIRE+ER FLI+++ P+ + Sbjct: 1050 VTVVHIELRIICPGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFLIILDLPMTRK 1124
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHYB_ARATH (Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15 Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 17 VHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQK 235 + EFR+ P G+P +L+ DMF+ S+ S EGLGL + +K++KLMNG VQYIRE+ERS FLI++E P+ ++ Sbjct: 1083 IRTEFRMACPGEGLPPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRKR 1155
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHYA_ARATH (Phytochrome A OS=Arabidopsis thaliana GN=PHYA PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15 Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 2 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 232 +++H+ +LE R+TH GIPE L++ MF + S EGL L +S+KLVKLMNG VQY+R+A +SSF+I E A++ Sbjct: 1046 RSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHYB1_SOLLC (Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.508e-15 Identity = 34/73 (46.58%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 14 IVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 232 +VH+E RI P G+P +L+ DMF+ S+ ++EGLGL + +K++KLMNG +QYIRE+ER F+I+++ P+ + Sbjct: 1053 VVHIELRIICPGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFMIILDLPMTRK 1125
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHYA_PEA (Phytochrome A OS=Pisum sativum GN=PHYA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.395e-15 Identity = 36/77 (46.75%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 2 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 232 K++H+V+LE ITH G+PE ++ MF ++ S EG+ L+IS+KL+KLMNG V+Y++EA +SSF++ +E AH+ Sbjct: 1045 KSVHLVNLELSITHGGSGVPEAALNQMFGNNVLESEEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAHK 1121
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHYA_LATSA (Phytochrome type A OS=Lathyrus sativus GN=PHYA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.395e-15 Identity = 36/77 (46.75%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 2 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 232 K++H+V+LE ITH G+PE ++ MF ++ S EG+ L+IS+KL+KLMNG V+Y++EA +SSF++ +E AH+ Sbjct: 1045 KSVHLVNLELSITHGGSGVPEAALNQMFGNNVLESEEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAHK 1121
BLAST of DY258282 vs. ExPASy Swiss-Prot
Match: PHY_MOUSC (Phytochrome OS=Mougeotia scalaris GN=PHY PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.227e-14 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 8 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGA--SREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 253 + + +++FR++HP G+PE LI MF + S+EGLGL I +KLV+LMNG VQY RE ER+ FL+ +E PLA + D K Sbjct: 1041 VSVANVDFRVSHPGEGLPEDLIDQMFDRADARVKSQEGLGLSICRKLVRLMNGEVQYRREGERNFFLLQLELPLAQRDDQASMK 1124 The following BLAST results are available for this feature:
BLAST of DY258282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258282 ID=DY258282; Name=DY258282; organism=Citrus clementina; type=EST; length=809bpback to top |