DY258283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL2_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis elegans GN=vha-2 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.264e-24 Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSS 366 KS VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++ + + Y L G+ AIGIVGDAGVR AQQP+LFVGM YG+IV +IL + Sbjct: 39 KSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL2_CAEBR (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis briggsae GN=vha-2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.264e-24 Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSS 366 KS VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++ + + Y L G+ AIGIVGDAGVR AQQP+LFVGM YG+IV +IL + Sbjct: 39 KSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVQAASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL_DROME (V-type proton ATPase 16 kDa proteolipid subunit OS=Drosophila melanogaster GN=Vha16 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.651e-24 Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 369 KSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ + +K Y L+ G+ AIGIVGDAGVR AQQP+LFVGM YGLIV I L ++ Sbjct: 38 KSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALEEPSK-YSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 159
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL_TORMA (V-type proton ATPase 16 kDa proteolipid subunit OS=Torpedo marmorata PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.678e-24 Identity = 60/123 (48.78%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 369 KSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ N + LF + AIGIVGDAGVR AQQP+LFVGM YGLIV +ILS++ Sbjct: 35 KSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTEDISLFKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 154
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL_NEPNO (V-type proton ATPase 16 kDa proteolipid subunit OS=Nephrops norvegicus PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.803e-24 Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 369 KSGVG+++M VMRPEL+MK I+PVVMAG++ IYGL++AV+I+ G +A +Y L+ G+ AIGIVGDAGVR AQQP+L+VGM YGLIV I L ++ Sbjct: 35 KSGVGISAMSVMRPELIMKCIIPVVMAGIIAIYGLVVAVLIA-GKLDEAPTYTLYQGFVHMGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLYVGMILILIFAEVLGLYGLIVAIFLYTK 156
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL_SHEEP (V-type proton ATPase 16 kDa proteolipid subunit OS=Ovis aries GN=ATP6V0C PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 369 KSG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+ +N L+ + AIGIVGDAGVR AQQP+LFVGM YGLIV +ILS++ Sbjct: 36 KSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLN---DGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL_BOVIN (V-type proton ATPase 16 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 369 KSG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+ +N L+ + AIGIVGDAGVR AQQP+LFVGM YGLIV +ILS++ Sbjct: 36 KSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLN---DGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL_HUMAN (V-type proton ATPase 16 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23 Identity = 58/123 (47.15%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 369 KSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL++AV+I+ +N L+ + AIGIVGDAGVR AQQP+LFVGM YGLIV +ILS++ Sbjct: 36 KSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLNDDIS---LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL_RAT (V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 59/123 (47.97%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 369 KSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ N L+ + AIGIVGDAGVR AQQP+LFVGM YGLIV +ILS++ Sbjct: 36 KSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
BLAST of DY258283 vs. ExPASy Swiss-Prot
Match: VATL_MOUSE (V-type proton ATPase 16 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 59/123 (47.97%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 369 KSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ N L+ + AIGIVGDAGVR AQQP+LFVGM YGLIV +ILS++ Sbjct: 36 KSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155 The following BLAST results are available for this feature:
BLAST of DY258283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258283 ID=DY258283; Name=DY258283; organism=Citrus clementina; type=EST; length=680bpback to top |