DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 2.900e-39
Identity = 87/221 (39.37%), Postives = 131/221 (59.28%), Query Frame = 3
Query:  129 QLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            Q+     F    L+ AT+ F +   LG+GG G VYKG L DG++VAVK+L        + QF  EV +IS   H+NL+ L G      + LLVY Y+ N S+  ++   ++++  L W  R  I +G + GL YLH   + KIIHRD+K +NILLD      + DFGL + M    T   T + GT+G++APEYL  G+ +EK DV+ +G++++E++TG++
Sbjct:  299 QVPSCVNFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWAD-QFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSL-DQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKK 517          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 3.788e-39
Identity = 88/220 (40.00%), Postives = 132/220 (60.00%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            ++ +  E+   T+ F  + +LG+GGFG VY G L DG  VAVK L      G + +F+ EV+++    HR+L+GL G+C       L+Y YMANG +   +  ++     L W  R +IA+ +A+GL YLH  C P ++HRDVK  NILL+E   A + DFGL++      + H++T V GT G++ PEY  T   SEK+DV+ +G++LLE++T Q   D
Sbjct:  572 RKITYPEVLKMTNNF--ERVLGKGGFGTVYHGNL-DGAEVAVKMLSHSSAQGYK-EFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGG-NVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVID 786          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 4.947e-39
Identity = 89/228 (39.04%), Postives = 136/228 (59.65%), Query Frame = 3
Query:  108 AEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            A   S   + + ++F+  E+   T  F  + +LG+GGFG VY G L D + VAVK L      G + +F+ EV+++    HR+L+GL G+C       L+Y YM  G +   +  + S +  L W TR +IA+ +A+GL YLH  C P ++HRDVK  NILL+E  +A + DFGL++      ++H+ T V GT G++ PEY  T   SEK+DV+ +G++LLE++T Q
Sbjct:  546 ARSSSSSIITKERKFTYSEVLKMTKNF--ERVLGKGGFGTVYHGNLDDTQ-VAVKMLSHSSAQGYK-EFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHS-VNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 768          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.947e-39
Identity = 84/207 (40.58%), Postives = 131/207 (63.29%), Query Frame = 3
Query:  198 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQ-----TEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            NILG G  G VYK  + +G+++AVK+L  +    G+++ +      EV ++    HRN++ L G CT     +L+Y YM NGS+   L     ++    +W    +IA+G A+G+ YLH  CDP I+HRD+K +NILLD +FEA V DFG+AKL+   ++   + V G+ G+IAPEY  T +  +K+D++ YG++LLE+ITG+R+ +
Sbjct:  723 NILGMGSTGTVYKAEMPNGEIIAVKKLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES--MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVE 927          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 4.947e-39
Identity = 92/239 (38.49%), Postives = 140/239 (58.58%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGE---LQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPL--DWPTRKKIALG--SARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDR 845
            F+ +E+  ATD F+  N+LG GGFG+V+KG L DG  VAVKR K     G E    Q   EV+I+    H+NL+ L G C  +   +LVY ++ NG++   +         L    P R+++ +   +A+GL YLH    P I HRDVK++NILLDE  +  V DFGL++L     +H+TT   GT+G++ PEY    + ++K+DV+ +G++L EL+T ++A D      D N+++  R
Sbjct:  342 FTGKEIVKATDNFAKSNLLGFGGFGEVFKGNLDDGTTVAVKRAK----LGNEKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRLGVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVR 576          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.947e-39
Identity = 88/218 (40.37%), Postives = 132/218 (60.55%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            +K F+ + ++ AT+G+    ILG+GG G VYKG L D  +VA+K+ +    S  E QF  EV ++S   HRN++ + G C      LLVY ++ +G++   L         L W  R +IA   A  L+YLH      IIHRD+K ANILLD+   A V DFG ++L+      +TT V GT+G++ PEY +TG  +EK+DV+ +G++L+EL++GQ+A
Sbjct:  389 VKIFTEKGMKEATNGYHESRILGQGGQGTVYKGILPDNSIVAIKKARLGNRSQVE-QFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYD-SSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKA 604          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 6.461e-39
Identity = 87/227 (38.33%), Postives = 137/227 (60.35%), Query Frame = 3
Query:  126 LQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL-KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            L L  +K +S+  LQ  T+ F+ +N++G G  G VY+ RL +GKL AVK+L K       + +F   V  I M  H N++ L G+C    ++LLVY Y +NG++   L         L W TR  +ALG+AR L YLHE C+P IIHR+ K+AN+LLD++   +V D GLA L+     + ++  +    G+ APE+  +G  + ++DV+ +G+++LEL+TG+ ++D
Sbjct:  465 LPLTSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPEF-DSGIYTWQSDVYSFGVVMLELLTGRMSYD 690          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 6.461e-39
Identity = 88/216 (40.74%), Postives = 132/216 (61.11%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            KRF+  E+   T  F  + +LG+GGFG VY G +   + VAVK L +  T G + +F+ EV ++    H NL+ L G+C       LVY ++ NG +   L  +  +   ++W  R +IAL +A GL YLH  C P ++HRDVK ANILLDE F+A + DFGL++    + ++  +T + GT+G++ PE   +GR  EK+DV+ +GI+LLE+IT Q
Sbjct:  552 KRFTYSEVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSK-EFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGN-SIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQ 763          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.102e-38
Identity = 92/224 (41.07%), Postives = 133/224 (59.38%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPP---LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLA 806
            +RF+  ++   T+ F  + ++G+GGFG VY+G L + +  A+K L      G + +F+TEV+++    H  L+ L G+C       L+Y  M  G+    L+E  S  P    L WP R KIAL SA G+ YLH  C PKI+HRDVK+ NILL EEFEA + DFGL++     +    T V GT G++ PEY  T   S K+DV+ +G++LLE+I+GQ   DL+
Sbjct:  548 RRFTYSDVNKMTNNF--QVVIGKGGFGVVYQGCL-NNEQAAIKVLSHSSAQGYK-EFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGN----LKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLS 763          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.102e-38
Identity = 93/220 (42.27%), Postives = 134/220 (60.91%), Query Frame = 3
Query:  198 NILGRGGFGKVYKGRLADGKLVAVKRLKEE--RTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQS--SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-----ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENV 830
            NI+G GG G VY+ +L  G+ +AVK+L  E  + +  E  F++EV+ +    H N++ L   C     + LVY +M NGS+   L   +   ++ PLDW TR  IA+G+A+GLSYLH    P I+HRDVK+ NILLD E +  V DFGLAK +  +D         + V G+ G+IAPEY  T + +EK+DV+ +G++LLELITG+R  D +   N + V
Sbjct:  690 NIIGSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDIV 909          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK1_ARATH2.900e-3939.37Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
Y1518_ARATH3.788e-3940.00Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH4.947e-3939.04Probable LRR receptor-like protein kinase At1g5189... [more]
Y5148_ARATH4.947e-3940.58Probable leucine-rich repeat receptor-like protein... [more]
WAKLP_ARATH4.947e-3938.49Wall-associated receptor kinase-like 15 OS=Arabido... [more]
WAK2_ARATH4.947e-3940.37Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
SRF3_ARATH6.461e-3938.33Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
RLK7_ARATH6.461e-3940.74Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
Y1755_ARATH1.102e-3841.07Probable LRR receptor-like serine/threonine-protei... [more]
HSL2_ARATH1.102e-3842.27LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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