DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.880e-38
Identity = 86/229 (37.55%), Postives = 136/229 (59.39%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTE-VKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            +++ +LQVAT+ FS  N+LG G FG+VY+ +  DGK++AVK++             TE V  I+   H N+  L G+C+   + L+VY +  NGS+   L   +    PL W  R KIALG+AR L YLHE C P I+H+++K+ANILLD E    + D GLA  +   +  +        G+ APE   +G+ S K+DV+ +G+++LEL+TG++ FD     ++++++
Sbjct:  407 YTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELLN---QNDEGYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLV 632          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.880e-38
Identity = 89/247 (36.03%), Postives = 145/247 (58.70%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITT-AVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +GF  +RR + ++          +++ +    +F  + ++ AT+ FS  NI+GRGGFG+V+ G L +G  VA+KRL +    G   +F+ EV +++   HRNL+ L GFC    EK+LVY ++ N S+   L +  +    LDW  R  I  G  RG+ YLH+     IIHRD+KA+NILLD +    + DFG+A++     +   T  + GT G++ PEY+  G+ S ++DV+ +G+++LE+I G+
Sbjct:  299 LGFVVYRRRKSYQ-------GSSTDITITHSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQGAR-EFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFD-PTKQGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGR 535          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.455e-38
Identity = 100/242 (41.32%), Postives = 142/242 (58.68%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNK------NILGRGGFGKVYKGRLADGKLVAVKRLK---EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P     E    +   FS  EL+  T+ F  +      N +G GGFG VYKG + + + VAVK+L    +  T   + QF  E+K+++   H NL+ L GF +   +  LVY YM NGS+  RL     + PPL W  R KIA G+A GLSYLHE+     IHRD+K+ANILLDE+F A + DFGLA+  + +  T +T+ + GT  ++APE L  G  + K+D++ +G++LLE+ITG  A D
Sbjct:  154 PENTSLEFSDTRFHSFSFFELKDVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNRTVAVKKLAAMVDISTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWNMRCKIAQGAANGLSYLHENHH---IHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVD 389          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 7.144e-38
Identity = 88/217 (40.55%), Postives = 128/217 (58.99%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            K F+  +++ AT+G+    ILG+GG   VYKG L D  +VA+K+ +    +  E QF  EV ++S   HRN++ L G C      LLVY ++  GS+   L      +  L W  R +IA+  A  ++YLH      IIHRD+K  NILLDE   A V DFG +KL       +TT V GT+G++ PEY +T   +EK+DV+ +G++L+ELI+GQ+A
Sbjct:   94 KIFTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVE-QFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMF-VSSLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKA 308          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 7.144e-38
Identity = 87/220 (39.55%), Postives = 128/220 (58.18%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +RF+  E+   T+ F  + ++G GGFG V  G +   + VAVK L +  +S G   F+ EV ++    H NL+ L G+C       L+Y ++  G +   L  +      ++W  R +IAL +A GL YLH  C P I+HRD+K  NILLDE+ +A + DFGL++      +THI+T V GT G++ PEY  T R  EK+DV+ +GI+LLE+IT Q   D
Sbjct:  567 RRFTYSEVIKMTNNF--QRVVGEGGFGVVCHGTINGSEQVAVKVLSQS-SSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGG-SFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVID 782          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 1.219e-37
Identity = 87/219 (39.73%), Postives = 129/219 (58.90%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSL-----PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            EL+  TD F +K ++G G +G+VY G L  G+  A+K+L   +    E  F  +V ++S     N++ L G+C     ++L Y Y  NGS+   L  R+        P L W  R KIA+G+A+GL YLHE   P IIHRD+K++NILL ++  A + DF L+ +  D      +T V GT G+ APEY  TG+ S K+DV+ +G++LLEL+TG++  D
Sbjct:   60 ELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQPDRE--FLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVD 276          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.219e-37
Identity = 101/241 (41.91%), Postives = 141/241 (58.51%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNK------NILGRGGFGKVYKGRLADGKLVAVKRLK---EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLD 842
            FS  EL+  T+ F  +      N +G GGFG VYKG   +  +VAVK+L    E  T   + QF  E+K+++   H NL+ L GF +      LVY YM NGS+  RL     + PPL W TR K+A G+A G+ +LHE+     IHRD+K+ANILLD++F A + DFGLA+       T +T+ + GT  ++APE L  G  + K+D++ +G++LLELITG  A D     N E  +LLD
Sbjct:  168 FSFHELKSITNNFDEQPASAGGNRMGEGGFGVVYKG-CVNNTIVAVKKLGAMVEISTEELKQQFDQEIKVMATCQHENLVELLGFSSDSDNLCLVYAYMPNGSLLDRLSCLDGT-PPLSWHTRCKVAQGTANGIRFLHENHH---IHRDIKSANILLDKDFTAKISDFGLARASARLAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLELITGLAAVD----ENREPQLLLD 398          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 3.545e-37
Identity = 82/221 (37.10%), Postives = 125/221 (56.56%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +K FSL +LQ     FS   +LG G  G+VYK +  DG+  AVK +       G   +F   V  IS   H+N+  L G+C+     +LVY Y  +GS+   L        PL W TR +IALG+A+ + YLHE C P ++H+++K++NILLD E    + D+GLA        H  T+ +  VG+ APE       ++K+DV+ +G+++LEL+TG++ +D
Sbjct:  400 VKAFSLADLQNTASCFSPNRLLGEGTIGRVYKAKFQDGRKFAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANF------HHRTSQNLGVGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYD 614          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 3.545e-37
Identity = 92/226 (40.71%), Postives = 125/226 (55.31%), Query Frame = 3
Query:  126 LQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            + LG+ K F L EL+ AT GF   N LGRG FG VYK  L+DG  VAVKR             F++E++I+    H N++ L G+C+ + E+LLVY YM +G++   L      L  LDW  R KI L +ARGL YLH   DP IIHRDVK +NILLD E  A + DFGL                     ++     +  S  + DV+ +GI+LLE+++G++A D
Sbjct:  499 VSLGETKIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLH---GDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGL---------------------VSSNERDSSNSDREGDVYDFGIVLLEILSGRKAID 700          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 4.630e-37
Identity = 89/224 (39.73%), Postives = 129/224 (57.59%), Query Frame = 3
Query:  156 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH--------ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            L E+   T  FS +  +G GGFG VY+  + +  + AVKRLKEE     +  +  FQTEV+ +S   H N++   G+C       LVY ++ NGS+  RL  +  + PPL WP R  I LG+AR + +LH+   P +IH DVK++N+LLDE     +GDFGLA+L  +   +         T  V GT+ ++  EY+ TGR +  TD F +G++LLE + GQRA
Sbjct:  202 LHEICQGTHDFSEELKIGEGGFGCVYRAVMRN-TVYAVKRLKEEADLEWTTVKQSFQTEVQQLSRFRHPNIVDFAGYCAQSGFYCLVYGFLPNGSLEDRLHVQTQAWPPLSWPQRLDILLGTARAIQFLHQD-SPSLIHGDVKSSNVLLDERLMPKLGDFGLARLSRFTGANPGQSSSVARTRTVRGTLAYLPEEYVKTGRLAVDTDTFSFGVVLLETLAGQRA 423          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRF7_ARATH1.880e-3837.55Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
CRK14_ARATH1.880e-3836.03Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
IRAK4_BOVIN2.455e-3841.32Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
WAKLS_ARATH7.144e-3840.55Putative wall-associated receptor kinase-like 16 O... [more]
PAM74_ARATH7.144e-3839.55Probable LRR receptor-like serine/threonine-protei... [more]
PTI1_SOLLC1.219e-3739.73Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
IRAK4_MOUSE1.219e-3741.91Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
SRF4_ARATH3.545e-3737.10Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
ACCR2_ARATH3.545e-3740.71Serine/threonine-protein kinase-like protein CCR2 ... [more]
IRAK1_BOVIN4.630e-3739.73Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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