DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 6.047e-37
Identity = 86/219 (39.27%), Postives = 130/219 (59.36%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSL-----PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            EL+ ATD F + +++G G +G+VY G L +    A+K+L   +    E  F  +V ++S   H N + L G+C     ++L Y +  NGS+   L  R+        P L W  R KIA+G+ARGL YLHE  +P IIHRD+K++N+LL E+  A + DF L+ +  D      +T V GT G+ APEY  TG+ + K+DV+ +G++LLEL+TG++  D
Sbjct:   65 ELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPDNE--FLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 281          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 6.047e-37
Identity = 80/218 (36.70%), Postives = 129/218 (59.17%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            F L +LQ AT  FS  N+LG G  G+VY+ + +DG+ +AVK++       G+ +  T + + +S   H+N+  L G+C+     +LVY Y  NGS+   L        PL W TR +IALG+AR + YLHE C P ++H+++K++NILLD +    + D+GL+K       ++ T+ +   G+ APE       + K+DV+ +G+++LEL+TG+  FD
Sbjct:  392 FELSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGLSKF------YLRTSQNLGEGYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFD 603          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 7.898e-37
Identity = 97/242 (40.08%), Postives = 141/242 (58.26%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNK------NILGRGGFGKVYKGRLADGKLVAVKRLK---EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P     E+   +   FS  EL+  T+ F  +      N +G GGFG VYKG + +   VAVK+L    +  T   + QF  E+K+++   H NL+ L GF +   +  LVY YM NGS+  RL     + PPL W  R KIA G+A G+++LHE+     IHRD+K+ANILLDE F A + DFGLA+  + +  T +T+ + GT  ++APE L  G  + K+D++ +G++LLE+ITG  A D
Sbjct:  153 PENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVD 388          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.032e-36
Identity = 90/237 (37.97%), Postives = 136/237 (57.38%), Query Frame = 3
Query:  114 DDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHITTA-------VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            D  E+ L Q   FS+ ++       ++ N++G G  G VY+  +  G+ +AVK++  +  SG    F +E+K +    HRN++ L G+C+    KLL Y Y+ NGS++SRL         +DW  R  + LG A  L+YLH  C P IIH DVKA N+LL   FE  + DFGLA+ +  Y +T I  A       + G+ G++APE+ S  R +EK+DV+ YG++LLE++TG+   D
Sbjct:  739 DSWEVTLYQKLDFSIDDI---VKNLTSANVIGTGSSGVVYRITIPSGESLAVKKMWSKEESGA---FNSEIKTLGSIRHRNIVRLLGWCSNRNLKLLFYDYLPNGSLSSRLHGAGKG-GCVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLD 968          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.032e-36
Identity = 79/238 (33.19%), Postives = 138/238 (57.98%), Query Frame = 3
Query:  138 QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSL-----PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            ++   +L EL      F NK ++G G +G+V+ G+   G+ VA+K+L    +   +  F +++ ++S   H + + L G+C     ++L+Y++   GS+   L  R+        P L+W  R KIA G+A+GL +LHE   P I+HRDV+++N+LL ++F A + DF L          + +T V GT G+ APEY  TG+ ++K+DV+ +G++LLEL+TG++  D  M    ++++
Sbjct:   57 EIPSVALDELNRMAGNFGNKALIGEGSYGRVFCGKFK-GEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLV 293          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.347e-36
Identity = 83/232 (35.78%), Postives = 134/232 (57.76%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            ++ +S+ +LQ+AT  FS  N+LG G FG+VY+    DGK++AVK++       G    F   V  I+   H N+  L G+C    + L+VY +  NGS+   L   +     L W +R KIALG+AR L YLHE C P I+ +++K+ANILLD E    + D GLA  +   +  +        G+ APE   +G+ S K+D++ +G+++LEL+TG++ FD     ++++++
Sbjct:  401 VRLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDDGKVLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQT---DEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLV 629          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.298e-36
Identity = 92/225 (40.89%), Postives = 126/225 (56.00%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEV-KIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-----TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            K FS  ELQ+AT+ FS +N+LG G  G VY+ +L DG+   V+ +     S  E +  TEV +  S   H N++ L GFC    E LLVY Y+ + S+ + + +      PL W  R +IA+G AR L YLH    P I H D+KA NILLDEE    + D GLA L       +       A+  T G+IAPE+   G S  K+D +  G++LLEL+TG++AFD
Sbjct:  401 KLFSAAELQLATNCFSEENLLGEGPLGSVYRAKLPDGQFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMHDEVYK--PLSWGLRLRIAIGVARALDYLHSSFCPPIAHSDLKATNILLDEELTPRIADCGLASLRPLTSNSVKLRASEIAIQNT-GYIAPEHGQPGSSGTKSDTYALGVLLLELLTGRKAFD 622          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.001e-36
Identity = 87/223 (39.01%), Postives = 128/223 (57.40%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL--------------KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY--KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +     N++G G  GKVYK  L +G+ VAVKRL              K  +    +  F+ EV+ +    H+N++ L   C+T   KLLVY YM NGS+   L   +  +  L W TR KI L +A GLSYLH    P I+HRD+K+ NIL+D ++ A V DFG+AK +D   K     + + G+ G+IAPEY  T R +EK+D++ +G+++LE++T +R  D
Sbjct:  674 ESLDEDNVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGM--LGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVD 894          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.001e-36
Identity = 88/218 (40.37%), Postives = 125/218 (57.34%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            F L EL+ AT+GF   N LGRG +G VYK  LADG+ VAVKR            +F+TE++I+    H N++ L G+ T + E+LLVY YM +G++   L    S   PL W  R KIA+ +A+GL YLH   +P+IIH DVK++N+LLD E+ A V DFGL    + K+  I                       K DV+ +G++LLE++TG++ +D
Sbjct:  508 FRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLH---SGFSPLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVADFGLVTSSNEKNLDI-----------------------KRDVYDFGVVLLEILTGRKRYD 699          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 3.920e-36
Identity = 84/215 (39.07%), Postives = 125/215 (58.14%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            RF+  E+Q  T+ F     LG GGFG VY G +   + VAVK L +  +S G   F+ EV+++    H NL+ L G+C       L+Y YM NG +   L  +      L W +R KI L +A GL YLH  C P ++HRD+K  NILLD+  +A + DFGL++      + +++T V GT G++ PEY  T   +EK+D++ +GI+LLE+I+ +
Sbjct:  566 RFTYSEVQEMTNNFDKA--LGEGGFGVVYHGFVNVIEQVAVKLLSQS-SSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFV-LSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNR 776          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2706_ARATH6.047e-3739.27Probable receptor-like protein kinase At2g47060 OS... [more]
SRF5_ARATH6.047e-3736.70Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
IRAK4_HUMAN7.898e-3740.08Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
Y4265_ARATH1.032e-3637.97Probable LRR receptor-like serine/threonine-protei... [more]
Y2197_ARATH1.032e-3633.19Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
SRF6_ARATH1.347e-3635.78Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
SRF2_ARATH2.298e-3640.89Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
HSL1_ARATH3.001e-3639.01Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
ACCR1_ARATH3.001e-3640.37Serine/threonine-protein kinase-like protein CCR1 ... [more]
Y2899_ARATH3.920e-3639.07Probable leucine-rich repeat receptor-like protein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
back to top