DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 3.920e-36
Identity = 93/258 (36.05%), Postives = 147/258 (56.98%), Query Frame = 3
Query:   57 FAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDE 824
            F  WRR       F    E DS++      ++  + ++ AT+ FS  N LG G FG+VYKG+ ++G  VAVKRL   + SG + + F+ E  ++S   HRNL  L GFC     K L+Y ++ N S+   L + +     LDW  R KI  G A+G+ +LH+     II+RD KA+NILLD +    + DFG+A +   +++   T  +  T  +++PEY   G+ S K+DV+ +GI++LE+I+G++  + ++  NDE
Sbjct:  314 FICWRRKSLQRTEF----ESDSDVSTTNSLQYEFKTIEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLS--KVSGQDTKKFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEKQ-GELDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGMATVFGMEESRGNTNWIAETFVYMSPEYAVHGKFSMKSDVYSFGILILEIISGKK--NSSLYQNDE 562          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 6.686e-36
Identity = 86/220 (39.09%), Postives = 126/220 (57.27%), Query Frame = 3
Query:  159 RELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL 803
            +E+  AT  F  K ++G GG GKVYK +L +  ++AVK+L E   S       + +F  E++ ++   HRN++ L GFC+      LVY YM  GS+   L E       LDW  R  +  G A  LSY+H    P I+HRD+ + NILL E++EA + DFG AKL+   D+   +AV GT G++APE     + +EK DV+ +G++ LE+I G+   DL
Sbjct:  766 QEIIKATGEFDPKYLIGTGGHGKVYKAKLPNA-IMAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVL-ENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLK-PDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDL 982          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 8.732e-36
Identity = 92/238 (38.66%), Postives = 137/238 (57.56%), Query Frame = 3
Query:  153 SLRELQVATDGFSNK-NILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--THITTAVHGTVGHIAPEY-LSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRVK 851
            S +E +   +   NK + +G G FG VYK  L + G+ +AVK+L           F  EV+I++ A H NL+ + G+  T    LLV  Y+ NG++ S+L ER+ S PPL W  R KI LG+A+GL+YLH    P  IH ++K  NILLDE+    + DFGL++L+  +D  T         +G++APE      R +EK DV+G+G+++LEL+TG+R  +      D  V+L D V+
Sbjct:  714 SSQEFERNPESLLNKASRIGEGVFGTVYKAPLGEQGRNLAVKKLVPSPILQNLEDFDREVRILAKAKHPNLVSIKGYFWTPDLHLLVSEYIPNGNLQSKLHEREPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVE---YGEDSFVILSDHVR 948          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 4.334e-35
Identity = 86/216 (39.81%), Postives = 135/216 (62.50%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLST--GRSSEKTDVFGYGIMLLELI 779
            LK++   EL+  T  FS+   +G+GGFG VY+G L++G+ VAVK LK+ + +G +  F  EV  +S   H N++ L GFC   +++ ++  ++ +GS+   +   +S  P +   T   IALG ARGL YLH  C  +I+H D+K  NILLD+ F   V DFGLAKL + +++ ++     GT+G+IAPE +S   G  S K+DV+ YG+++L++I
Sbjct:  483 LKQYIYAELKKITKSFSHT--VGKGGFGTVYRGNLSNGRTVAVKVLKDLKGNGDD--FINEVTSMSQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFISRNKSLTPNVT--TLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPKVADFGLAKLCEKRESILSLIDTRGTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMI 692          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: IRAK1_HUMAN (Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens GN=IRAK1 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 7.392e-35
Identity = 84/224 (37.50%), Postives = 126/224 (56.25%), Query Frame = 3
Query:  156 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH--------ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            L E+   T  FS +  +G GGFG VY+  + +  + AVKRLKE      +  +  F TEV+ +S   H N++   G+C       LVY ++ NGS+  RL  +  + PPL WP R  I LG+AR + +LH+   P +IH D+K++N+LLDE     +GDFGLA+   +  +          T  V GT+ ++  EY+ TGR +  TD F +G+++LE + GQRA
Sbjct:  202 LCEISRGTHNFSEELKIGEGGFGCVYRAVMRN-TVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQD-SPSLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQRA 423          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CCR12_ARATH (Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana GN=At1g28390 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.261e-34
Identity = 94/231 (40.69%), Postives = 134/231 (58.01%), Query Frame = 3
Query:  138 QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLV-AVKRLKEERTSGGE----LQFQTEVKIISMAVHRNLLGLCGFCTTVTE--KLLVYRYMANGSVASRLRERQSSLPPL-DWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHIT-TAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL 803
            +L+ F+  EL VAT+GFS  N LG+G  G+VYK  L DGKL+ AVKR     T G       Q   E++I+S   HR ++ L G+C       KLLV  YM NG++  +L  R S    L  W  R K AL  A  +  LH   + ++IHRD+K+ N+L+D +  A + DFGLA + +  D  +  T   GT+G++ P YL+    + K+DVF +GI+LLE+I+G+ A DL
Sbjct:   36 KLRVFNYDELAVATNGFSANNFLGKGSHGRVYKAVLDDGKLLAAVKRTTITTTVGNNNNNVSQVDNEIEILSRVRHRWMVNLIGYCVDHRRKTKLLVVEYMPNGTLHDQLHSRSSLDSRLSSWNRRIKHALQIAIAVHALHT-AETQVIHRDIKSCNVLIDGDGNARLADFGLALIGNVDDERLKYTPPAGTLGYLDPSYLAPADLTAKSDVFSFGILLLEIISGREAIDL 265          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.151e-34
Identity = 89/216 (41.20%), Postives = 131/216 (60.65%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLST--GRSSEKTDVFGYGIMLLELI 779
            L  ++  EL+  T  FS   I+G+GGFG VY G L++G+ VAVK LK+ + S  +  F  EV  +S   H N++ L GFC   +++ +VY ++ NGS+  +   R  SL   D  T   IALG ARGL YLH  C  +I+H D+K  NILLD      V DFGLAKL + +++ ++     GT+G+IAPE  S   GR S K+DV+ +G++++++I
Sbjct:  485 LNMYTYAELKKITKSFSY--IIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGSAED--FINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSL-DQFMSRNKSLTQ-DVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDGNLCPKVSDFGLAKLCEKRESVLSLMDTRGTIGYIAPEVFSRMYGRVSHKSDVYSFGMLVIDMI 694          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 2.151e-34
Identity = 84/225 (37.33%), Postives = 132/225 (58.67%), Query Frame = 3
Query:  132 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL-KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            L  +K F++  LQ  T+ FS++N++G G  G VY+  L  GKL AV++L K+      E +F   V  I    H N++ L GFC+  +++LL++ Y  NG++   L         L W  R +IAL +A+ L YLHE CDP  IHR+ K+ANILLD++    V D GLA L+     + ++  +    G+ APE+   G  + K DV+ +G+++LEL+TG++++D
Sbjct:  460 LTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEF-EYGIYTMKCDVYSFGVVMLELLTGRKSYD 683          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.809e-34
Identity = 83/226 (36.73%), Postives = 130/226 (57.52%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGEL-------QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL 803
            +F  +++  +T+ F   +++G GG+ KVY+  L D  ++AVKRL +  T   E+       +F  EVK ++   HRN++ L GFC+      L+Y YM  GS+ ++L         L W  R  +  G A  LSY+H      I+HRD+ + NILLD ++ A + DFG AKL+   D+   +AV GT G++APE+  T + +EK DV+ +G+++LELI G+   DL
Sbjct:  838 KFKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQD-TIIAVKRLHD--TIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSL-NKLLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLK-TDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDL 1058          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.809e-34
Identity = 84/214 (39.25%), Postives = 129/214 (60.28%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            F+  ++   T+ F    +LG+GGFG VY G   D   VAVK L E    G + +F++EV+++    H NL  L G+     +  L+Y +MANG++A  L  +      L W  R +IAL +A+GL YLH  C P I+HRDVK +NILL+E+  A + DFGL++    +  +H++T V GT G++ P    T   +EK+D++ +G++LLE+ITG+
Sbjct:  560 FTFADVIKMTNNFGQ--VLGKGGFGTVYHG-FYDNLQVAVKLLSETSAQGFK-EFRSEVEVLVRVHHVNLTALIGYFHEGDQMGLIYEFMANGNMADHLAGKYQHT--LSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGK 767          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK22_ARATH3.920e-3636.05Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
Y4885_ARATH6.686e-3639.09Probable LRR receptor-like serine/threonine-protei... [more]
Y3804_ARATH8.732e-3638.66Probably inactive leucine-rich repeat receptor-lik... [more]
Y5392_ARATH4.334e-3539.81Probable receptor-like protein kinase At5g39020 OS... [more]
IRAK1_HUMAN7.392e-3537.50Interleukin-1 receptor-associated kinase 1 OS=Homo... [more]
CCR12_ARATH1.261e-3440.69Serine/threonine-protein kinase-like protein At1g2... [more]
Y5393_ARATH2.151e-3441.20Probable receptor-like protein kinase At5g39030 OS... [more]
SRF1_ARATH2.151e-3437.33Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
Y1571_ARATH2.809e-3436.73Probable leucine-rich repeat receptor-like protein... [more]
Y1570_ARATH2.809e-3439.25Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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