DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 6.258e-34
Identity = 100/257 (38.91%), Postives = 144/257 (56.03%), Query Frame = 3
Query:  138 QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHIT----TAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL------AMLANDENVMLLDRVKG-YPXRE 869
            Q + F+  E+  AT  FS +  +G G +G VYK  L      AV ++ +   +    QFQ E++I+S   H +L+ L G C    +  LVY YM NGS+  RL +  +S PPL W  R +IA   A  L +LH+     IIHRD+K ANILLD  F + VGD GL+ +  +D   T  T    T+  GT+ +I PEY  TGR S K+D++ +G++LL+L+T + A  L      AM +NDE + +LD+  G +P  E
Sbjct:  464 QYQHFAWEEIMAATSSFSEELKIGMGAYGAVYKCNLHH--TTAVVKVLQSAENQLSKQFQQELEILSKIRHPHLVLLLGACPE--QGALVYEYMENGSLEDRLFQVNNS-PPLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPAIALTHFVESAMDSNDEFLKILDQKAGNWPIEE 715          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: IRAK1_MOUSE (Interleukin-1 receptor-associated kinase 1 OS=Mus musculus GN=Irak1 PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 6.258e-34
Identity = 82/222 (36.94%), Postives = 123/222 (55.41%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGEL---QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI--------TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            E+   T  FS +  +G GGFG VY+  + +    AVKRLKEE      +    F TEV+ +S   H N++   G+C       LVY ++ NGS+  +L  +  +  PL WP R  I LG+AR + +LH+   P +IH D+K++N+LLDE     +GDFGLA+   +             T+ V GT+ ++  EY+ TGR +  TD F +G+++LE + GQRA
Sbjct:  204 EISQGTCNFSEELRIGEGGFGCVYRAVMRN-TTYAVKRLKEEADLEWTMVKQSFLTEVEQLSRFRHPNIVDFAGYCAESGLYCLVYGFLPNGSLEDQLHLQTQACSPLSWPQRLDILLGTARAIQFLHQD-SPSLIHGDIKSSNVLLDERLMPKLGDFGLARFSRFAGAKASQSSTVARTSTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVILETLAGQRA 423          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 8.173e-34
Identity = 89/236 (37.71%), Postives = 137/236 (58.05%), Query Frame = 3
Query:  138 QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLGLCGFC-TTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD----THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDEN 827
            +LKRF  +EL+ ATD F++ NI+G      VYKG+L DG ++AVK L  +E ++  +  F TE K +S   HRNL+ + GF   +   K LV  +M NG++   +    S+ P      +  + +  A G+ YLH      I+H D+K ANILLD +  A V DFG A+++ +++    T  T+A  GT+G++APE+    + + K DVF +GI+++EL+T QR   L    NDE+
Sbjct:  854 KLKRFEPKELEQATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFSAESDKWFYTEAKTLSQLKHRNLVKILGFAWESGKTKALVLPFMENGNLEDTI--HGSAAPIGSLLEKIDLCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGFREDGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSL----NDED 1083          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.821e-33
Identity = 81/218 (37.16%), Postives = 131/218 (60.09%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR-ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLL 839
            ++  +LG+G FG  YK  L D   VAVKRLK+   + G+  F+ +++II    H N++ L  +  +  EKL+VY Y + GSVAS L   R  +  PLDW TR KIA+G+A+G++ +H+  + K++H ++K++NI L+ E    V D GL  +M    + +   +    G+ APE   T +SS+ +DV+ +G++LLEL+TG+    +   A DE + L+
Sbjct:  338 ASAEVLGKGTFGTTYKAVLEDATSVAVKRLKD--VAAGKRDFEQQMEIIGGIKHENVVELKAYYYSKDEKLMVYDYFSRGSVASLLHGNRGENRIPLDWETRMKIAIGAAKGIARIHKENNGKLVHGNIKSSNIFLNSESNGCVSDLGLTAVM----SPLAPPISRQAGYRAPEVTDTRKSSQLSDVYSFGVVLLELLTGKS--PIHTTAGDEIIHLV 547          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 5.298e-33
Identity = 92/260 (35.38%), Postives = 142/260 (54.62%), Query Frame = 3
Query:  114 DDSELQLGQLKRFS------LRELQVATDGFSNK-NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRER-----QSSL--PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTG-RSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDR 845
            D S + +G+L  FS        + +  T    +K NI+G G  G VY+     G  +AVK+L+       + +F+ E+  +    H NL    G+  + T +L++  ++ NGS+   L  R      SS     L+W  R +IALG+A+ LS+LH  C P I+H +VK+ NILLDE +EA + D+GL K +   D+  +T   H  VG+IAPE      R+SEK DV+ YG++LLEL+TG++  +    +  EN +L+ R
Sbjct:  562 DSSGVIIGKLVLFSKNLPSKYEDWEAGTKALLDKENIIGMGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEQEIGRLGGLQHPNLSSFQGYYFSSTMQLILSEFVPNGSLYDNLHLRIFPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVE----SPSENQVLILR 817          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 5.298e-33
Identity = 90/226 (39.82%), Postives = 131/226 (57.96%), Query Frame = 3
Query:  138 QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVT-EKLLVYRYMANGSVASRLRERQ--SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL 803
            +L+RF  R+L+ AT GF   N+LGRG  G VYK  +   + +AVKR  + R    E  F  E +I+S       + L GF    + E LLV  +M NGS+   +      +S     W  R KIAL  A+ +  LH    P IIHRD+K+AN+L+D+   A +GDFGLA   +  D  + +T   GT+G++ P+Y++  R S KTDVF +GI+LLE+I+G++A D+
Sbjct:   43 RLRRFLHRDLESATGGFDINNLLGRGSHGSVYKAVIGS-RHIAVKRPSKSREISRE--FHNEFEILSRIRSPRFVNLLGFSADNSKEPLLVVEFMGNGSLYDVIHSDTVLNSGAISSWSKRIKIALQIAKAVHLLHSQETP-IIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAIDV 264          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.013e-32
Identity = 78/197 (39.59%), Postives = 120/197 (60.91%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVT-EKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            I+G+  +G VYK  L DG  VAVKRL+E+ T   + +F+ E+ ++    H NLL L  +      EKL+V+ YM+ GS+A+ L  R   +  ++WPTR  +  G ARGL YLH H +  IIH ++ ++N+LLDE   A + D+GL++LM         A  G +G+ APE     +++ KTDV+  G+++LEL+TG+
Sbjct:  493 IMGKSTYGTVYKATLEDGSQVAVKRLREKITKS-QKEFENEINVLGRIRHPNLLALRAYYLGPKGEKLVVFDYMSRGSLATFLHARGPDVH-INWPTRMSLIKGMARGLFYLHTHAN--IIHGNLTSSNVLLDENITAKISDYGLSRLMTAAAGSSVIATAGALGYRAPELSKLKKANTKTDVYSLGVIILELLTGK 685          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.629e-32
Identity = 86/217 (39.63%), Postives = 128/217 (58.99%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR-ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVML 836
            ++  +LG+G FG  YK  L    LVAVKRLK+   +  + +F+ +++++    H NL+ L  +  +  EKLLVY +M  GS+++ L   + +  PPL+W  R  IALG+ARGL YLH   DP   H +VK++NILL    +A V DFGLA+L+    T    A     G+ APE     R S+K DV+ +G++LLEL+TG+   +  M  N+E + L
Sbjct:  366 ASAEVLGKGTFGTAYKAVLDAVTLVAVKRLKD--VTMADREFKEKIEVVGAMDHENLVPLRAYYYSGDEKLLVYDFMPMGSLSALLHGNKGAGRPPLNWEVRSGIALGAARGLDYLHSQ-DPLSSHGNVKSSNILLTNSHDARVSDFGLAQLVSASSTTPNRAT----GYRAPEVTDPRRVSQKADVYSFGVVLLELLTGKAPSNSVM--NEEGMDL 573          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 2.629e-32
Identity = 92/243 (37.86%), Postives = 138/243 (56.79%), Query Frame = 3
Query:  108 AEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSL-----PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVH-----GTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLA 806
            A +   LQ  Q  +F   E+  AT  FS++  +G GG+G VY+  L     VAVK L  +++S  + QF  E++I+S   H +LL L G C       LVY YM NGS+  RL +R+ ++     PPL W  R +IA   A  L +LH +    I+HRD+K ANILLD    + +GD GL+K+++   +H +T  +     GT  +I PEY  TG  + ++D++ +GI+LL+L+T + A  LA
Sbjct:  403 ALEGGPLQRQQYMKFEWEEIVEATSSFSDELKIGVGGYGSVYRCNLHH-TTVAVKVLHSDKSSLTK-QFHQELEILSKIRHPHLLLLLGACPE--RGSLVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTARSAMGLA 641          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.434e-32
Identity = 83/199 (41.71%), Postives = 124/199 (62.31%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVT-EKLLVYRYMANGSVASRLRER--QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            I+G+  +G  YK  L DG  VAVKRL+E+ T G + +F+ EV  +    H+NLL L  +      EKLLV+ YM+ GS+++ L  R  ++ +P   W TR KIA G +RGL++LH +    +IH ++ A+NILLDE+  A + D+GL++LM         A  GT+G+ APE+     +S KTDV+  GI++LEL+TG+
Sbjct:  542 IMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGVK-EFEGEVTALGKIRHQNLLALRAYYLGPKGEKLLVFDYMSKGSLSAFLHARGPETLIP---WETRMKIAKGISRGLAHLHSN--ENMIHENLTASNILLDEQTNAHIADYGLSRLMTAAAATNVIATAGTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGK 734          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PUB35_ARATH6.258e-3438.91U-box domain-containing protein 35 OS=Arabidopsis ... [more]
IRAK1_MOUSE6.258e-3436.94Interleukin-1 receptor-associated kinase 1 OS=Mus ... [more]
FLS2_ARATH8.173e-3437.71LRR receptor-like serine/threonine-protein kinase ... [more]
Y4374_ARATH1.821e-3337.16Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y1124_ARATH5.298e-3335.38Probable LRR receptor-like serine/threonine-protei... [more]
CCR35_ARATH5.298e-3339.82Serine/threonine-protein kinase-like protein At3g5... [more]
IMK3_ARATH2.013e-3239.59Probable leucine-rich repeat receptor-like protein... [more]
RLK90_ARATH2.629e-3239.63Probable inactive receptor kinase RLK902 OS=Arabid... [more]
PUB51_ARATH2.629e-3237.86U-box domain-containing protein 51 OS=Arabidopsis ... [more]
IMK2_ARATH3.434e-3241.71Probably inactive leucine-rich repeat receptor-lik... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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