DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 4.198e-30
Identity = 82/249 (32.93%), Postives = 128/249 (51.41%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSL--------------------------PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDTHITTAVHGTVGHIAPEYLSTGRS--SEKTDVFGYGIMLLELITGQRAFD 800
            L   +  +L  AT  F    +L  G FG VY+G L  G  VAVK L    T   + +   E++ +    H NL+ L G+C    +++ +Y YM NG++ + L +    +                          P   W  R KIALG+AR L++LH  C P IIHRDVKA+++ LD+ +E  + DFGLAK+  +  D  I   +HG+ G++ PE+L       + K+DV+ +G++L EL+TG++  +
Sbjct:  531 LLNITFSDLLSATSNFDRDTLLADGKFGPVYRGFLPGGIHVAVKVLVHGSTLSDQ-EAARELEFLGRIKHPNLVPLTGYCIAGDQRIAIYEYMENGNLQNLLHDLPFGVQTTDDWTTDTWEEETDNGTQNIGTEGPVATWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAKVFGNGLDDEI---IHGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIE 775          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 5.482e-30
Identity = 80/229 (34.93%), Postives = 127/229 (55.46%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRVKGYPXREEF 875
            ++  +LG+G FG  YK  L D   V VKRL+E   S  E + Q E+ +  +  H N + L  +  +  EKLLVY+YM  GS+   +   +     +DW TR KIA G+++ +SYLH     K +H D+K++NILL E+ E  + D  L  L +     + T    T+G+ APE + T R S+++DV+ +G+++LE++TG+       L ++  V+ L R      REE+
Sbjct:  348 ASAEVLGKGSFGTAYKAVLEDTTAVVVKRLREVVASKKEFEQQMEI-VGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSLFGIMHGNRGDRG-VDWETRMKIATGTSKAISYLHSL---KFVHGDIKSSNILLTEDLEPCLSDTSLVTLFN-----LPTHTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTPLTQPGLEDERVVIDLPRWVRSVVREEW 566          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: KPEL_DROME (Serine/threonine-protein kinase pelle OS=Drosophila melanogaster GN=pll PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 9.351e-30
Identity = 86/238 (36.13%), Postives = 131/238 (55.04%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQ---TEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR--ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI--TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRVK 851
            EL+ ATDG+S  N LG+GGFG VY+G+     + + V   +        ++ Q    E+K ++   H N+L L G+     +  LVY+ M  GS+ +RLR  + Q+ LP L W  R  I+LG+ARG+ +LH      +IH D+K ANILLD+  +  +GDFGL +        +     V GT  ++ PE+ +  + S   DV+ +GI+LLE+ TG++  D  +  N+    LLD VK
Sbjct:  205 ELENATDGWSPDNRLGQGGFGDVYRGKWKQLDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTD-RVPENETKKNLLDYVK 441          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.221e-29
Identity = 77/220 (35.00%), Postives = 131/220 (59.55%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDTHIT----TAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +++++ E+  AT+GFS + ++G GG+GKVY+  L D    AVK ++ + T   + +F  EV+++S   H +++ L G C       LVY Y+ NGS+   +  R++  PPL W  R ++    A GL++LH      I+HRD+K  NILL+  + + + D GLAKL+ D    ++T    + + GT+ +I PEY  TG    K+D++ +GI++L+L+T +
Sbjct:  428 RKYTIEEIVTATEGFSPEKVIGEGGYGKVYQCSL-DSTPAAVKVVRLD-TPEKKQEFLKEVEVLSQLRHPHVVLLLGACPE--NGCLVYEYLENGSLEEYIFHRKNK-PPLPWFIRFRVIFEVACGLAFLHSSKPEPIVHRDLKPGNILLNRNYVSKIADVGLAKLVTDVAPDNVTMYRNSVLAGTLHYIDPEYHRTGTIRPKSDLYAFGIIILQLLTAR 642          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.595e-29
Identity = 74/201 (36.82%), Postives = 120/201 (59.70%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR-ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ++  +LG+G  G  YK     G +VAVKRL++      E +F+  + ++    H NL+ L  +  +  EKLLV+ YM+ GS+++ L   + +   PL+W TR  IALG+AR +SYLH   D    H ++K++NILL + +EA V D+GLA ++       T+A +   G+ APE     + S+K DV+ +G+++LEL+TG+
Sbjct:  346 ASAEVLGKGTVGSSYKASFEHGLVVAVKRLRDVVVP--EKEFRERLHVLGSMSHANLVTLIAYYFSRDEKLLVFEYMSKGSLSAILHGNKGNGRTPLNWETRAGIALGAARAISYLHSR-DGTTSHGNIKSSNILLSDSYEAKVSDYGLAPIISS-----TSAPNRIDGYRAPEITDARKISQKADVYSFGVLILELLTGK 538          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.721e-29
Identity = 74/201 (36.82%), Postives = 121/201 (60.20%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR-ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ++  +LG+G  G  YK  L +G  V VKRLK+   S  E  F+T+++++    H N++ L  +  +  EKLLV+ +M  GS+++ L   R S   PLDW  R +IA+ +ARGL++LH     K++H ++KA+NILL    +  V D+GL +L        ++  +   G+ APE L T + + K+DV+ +G++LLEL+TG+
Sbjct:  352 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVMASKKE--FETQMEVVGKIKHPNVIPLRAYYYSKDEKLLVFDFMPTGSLSALLHGSRGSGRTPLDWDNRMRIAITAARGLAHLH--VSAKLVHGNIKASNILLHPNQDTCVSDYGLNQLFSN-----SSPPNRLAGYHAPEVLETRKVTFKSDVYSFGVLLLELLTGK 543          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.641e-29
Identity = 70/202 (34.65%), Postives = 123/202 (60.89%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR-ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ++  +LG+G +G  YK  L +   V VKRLKE   + G+ +F+ +++IIS +  H +++ L  +  +  EKL+V  Y   G+++S L   R S   PLDW +R KI L +A+G+++LH    PK  H ++K++N+++ +E +A + DFGL  LM      +  A     G+ APE + T + + K+DV+ +G+++LE++TG+
Sbjct:  359 ASAEVLGKGSYGTAYKAVLEESTTVVVKRLKE--VAAGKREFEQQMEIISRVGNHPSVVPLRAYYYSKDEKLMVCDYYPAGNLSSLLHGNRGSEKTPLDWDSRVKITLSAAKGIAHLHAAGGPKFSHGNIKSSNVIMKQESDACISDFGLTPLM-----AVPIAPMRGAGYRAPEVMETRKHTHKSDVYSFGVLILEMLTGK 553          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.303e-28
Identity = 85/245 (34.69%), Postives = 130/245 (53.06%), Query Frame = 3
Query:  159 RELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVAS-RLRERQSSLPP--LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-------------------------------TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +E+++ T   ++  ILG  G   +YK  L DG++ AV+RL E   S    + F+  ++ I   VH NL+ LCGF     EKL++Y ++ NGS+ + R R+   S  P  L W TR KIA G ARGL+YLHE    K +H ++K +NILL  + E  +GDFGL +L+  + ++I                                ++V     + APE   + + S K DV+G+G++LLEL+TG+
Sbjct:  440 KEMEIETLLKASAYILGATGSSIMYKAVLEDGRVFAVRRLGENGLSQRRFKDFEPHIRAIGKLVHPNLVRLCGFYWGTDEKLVIYDFVPNGSLVNPRYRKGGGSSSPYHLPWETRLKIAKGIARGLAYLHE---KKHVHGNLKPSNILLGHDMEPKIGDFGLERLLTGETSYIRAGGSSRIFSSKRYTTSSREFSSIGPTPSPSPSSVGAMSPYCAPESFRSLKPSPKWDVYGFGVILLELLTGK 681          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 8.753e-28
Identity = 78/221 (35.29%), Postives = 127/221 (57.47%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSS----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            FS  +L  AT+ F++ N++ RG  G +++G L +G  V +K++  +E ++ G    + +E+++ S A H+ L+   G C    ++K LVY++M +G +AS L  +  +    L  LDW TR KIALG+A GLSYLH  C P ++HRDV+A++ILLD++FE  +G    A    D   + I+  +        P       +    DV+ +G +LLEL+TG+
Sbjct:  515 FSYEQLLQATEEFNDANLIKRGHSGNLFRGFLENGIPVVIKKIDVREGKSEG----YISELELFSKAGHQRLVPFLGHCLENESQKFLVYKFMRHGDLASSLFRKSENEGDGLKSLDWITRLKIALGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEAYAQGDAYQSRISRLLR-LPQSSEPSSSGVTNAICSYDVYCFGKVLLELVTGK 730          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 8.753e-28
Identity = 94/276 (34.06%), Postives = 138/276 (50.00%), Query Frame = 3
Query:   78 RPHEFFFDVPAEDDSELQLG------QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVH-----GTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLAND------ENVMLLDRVKG 854
            R  EF  +  A +  +LQ        Q + ++  E+  AT  F+    +G G +G VYK  L      AVK L    T   + QF  E++I+S   H +L+ L G C       LVY YM NGS+  RL    +  PP+ W  R +IAL  A  L +LH+     IIHRD+K  NILLD  F + +GD GL+ +++  D    T        GT+ +I PEY  TG  S K+DV+  G+++L+LIT + A  +  +  +      E + +LD+  G
Sbjct:  448 REAEFKAERDAREKDKLQASLVSPGVQYQHYTWEEIAAATSDFAENLKIGIGAYGSVYKCNLHH-TTGAVKVLHAGETQLSK-QFDQELEILSKIRHPHLVLLLGACPE--RGCLVYEYMDNGSLDDRLM-LVNDTPPIPWFERFRIALEVASALVFLHKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDDVSSRTIFKQTSPVGTLCYIDPEYQRTGIISPKSDVYSLGVVILQLITAKPAIAITHMVEEAIGDDAEFMAILDKKAG 718          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2242_ARATH4.198e-3032.93Probable LRR receptor-like serine/threonine-protei... [more]
Y5516_ARATH5.482e-3034.93Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
KPEL_DROME9.351e-3036.13Serine/threonine-protein kinase pelle OS=Drosophil... [more]
PUB34_ARATH1.221e-2935.00U-box domain-containing protein 34 OS=Arabidopsis ... [more]
Y3288_ARATH1.595e-2936.82Probable inactive receptor kinase At3g02880 OS=Ara... [more]
Y2267_ARATH2.721e-2936.82Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y5830_ARATH4.641e-2934.65Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y4372_ARATH2.303e-2834.69Probable LRR receptor-like serine/threonine-protei... [more]
Y2165_ARATH8.753e-2835.29Probable LRR receptor-like serine/threonine-protei... [more]
PUB52_ARATH8.753e-2834.06U-box domain-containing protein 52 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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