DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y4312_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana GN=At4g31250 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.143e-27
Identity = 79/217 (36.41%), Postives = 120/217 (55.30%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR-ERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +RF+L+++  A+       +LG GGFG  YK  L+ G+ V VKR +     G E +F   +K I    H NLL L  F     EKLLV  Y++NGS+A+ L   R      LDWP R KI  G  RGL+YL+    D  + H  +K++N+LLD  FE ++ D+ L  +++   +         V + APE+    R+S ++DV+  GI++LE++TG+
Sbjct:  357 ERFTLQDMLRAS-----AEVLGSGGFGSSYKAALSSGRAVVVKRFRFMSNIGRE-EFYDHMKKIGRLSHPNLLPLIAFYYRKEEKLLVTNYISNGSLANLLHANRTPGQVVLDWPIRLKIVRGVTRGLAYLYRVFPDLNLPHGHLKSSNVLLDPNFEPLLTDYALVPVVNRDQSQ-----QFMVAYKAPEFTQQDRTSRRSDVWSLGILILEILTGK 562          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.803e-26
Identity = 87/238 (36.55%), Postives = 129/238 (54.20%), Query Frame = 3
Query:  135 GQLKRFSLRELQVATDGFSNKN----------ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSV--------ASRLRERQSSLP-PLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            GQLK+ S  +L V  DG +  +          ILG  G G VYK  L +G   AV+R++ E  +  +  +F+ EV+ I+   H NL+ + GFC    EKLL+  Y+ NGS+        AS      SSL  PL +  R KIA G ARGLSY++E    K +H ++K  NILL+ E E ++ D GL +LM       TT    +  +  PE+ ++ + + K DV+ +G++LLEL+T +
Sbjct:  445 GQLKQSSQTQL-VTVDGETRLDLDTLLKASAYILGTTGTGIVYKAVLENGTAFAVRRIETESCAAAKPKEFEREVRAIAKLRHPNLVRIRGFCWGDDEKLLISDYVPNGSLLCFFTATKASSSSSSSSSLQNPLTFEARLKIARGMARGLSYINEK---KQVHGNIKPNNILLNAENEPIITDLGLDRLMTPARESHTTGPTSSSPYQPPEWSTSLKPNPKWDVYSFGVILLELLTSK 678          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.066e-25
Identity = 63/202 (31.19%), Postives = 114/202 (56.44%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQS--SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ++  +LG+G FG  YK  L D   + VKR+KE   S  + +F+ +++ I    H N+  L G+  +  EKL+VY Y  +GS+++ L  ++       L+W TR  +  G+ARG++++H     K++H ++K++NI L+ +    +   G+A LM     H        VG+ APE   T + ++ +DV+ +GI++ E++TG+
Sbjct:  309 ASAEVLGKGPFGTTYKVDLEDSATIVVKRIKE--VSVPQREFEQQIENIGSIKHENVATLRGYFYSKDEKLVVYDYYEHGSLSTLLHGQKGLRDRKRLEWETRLNMVYGTARGVAHIHSQSGGKLVHGNIKSSNIFLNGKGYGCISGTGMATLMHSLPRH-------AVGYRAPEITDTRKGTQPSDVYSFGILIFEVLTGK 501          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 6.935e-25
Identity = 68/211 (32.23%), Postives = 119/211 (56.40%), Query Frame = 3
Query:  225 KVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVG--HIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRVK 851
            +VY   L+ G+L+AVK+L   +    +   + +V+ I+   H+N+  + GFC       L+Y +  NGS+   L      LP   W  R KIALG A+ L+Y+ +   P ++HR++K+ANI LD++FE  + DF L  ++   +T   + VH      + APE   + +++E  DV+ +G++LLEL+TGQ A      ++ E++ ++ +V+
Sbjct:  602 EVYVLSLSSGELLAVKKLVNSKNISSK-SLKAQVRTIAKIRHKNITRILGFCFKDEMIFLIYEFTQNGSLHDMLSRAGDQLP---WSIRLKIALGVAQALAYISKDYVPHLLHRNLKSANIFLDKDFEPKLSDFALDHIVG--ETAFQSLVHANTNSCYTAPENHYSKKATEDMDVYSFGVVLLELVTGQSAEKAEEGSSGESLDIVKQVR 806          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 6.935e-25
Identity = 79/236 (33.47%), Postives = 128/236 (54.24%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKII-HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYL-STGR-SSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLL 839
            ++RF L++L  A+       +LG G FG  YK  ++ G+ + VKR K     G + +F   ++ +    H N+L L  +     EKLLV  +M N S+AS L    S+   LDW TR KI  G A+GLSYL +      I H  +K++NI+LD+ FE ++ D+ L  +M  +  H     +    + +PEY  S G+  ++KTDV+ +G+++LE++TG+   +      D N+ L+
Sbjct:  365 IQRFDLQDLLRAS-----AEVLGSGTFGASYKAAISSGQTLVVKRYKHMNNVGRD-EFHEHMRRLGRLNHPNILPLVAYYYRREEKLLVTEFMPNSSLASHLHANNSA--GLDWITRLKIIKGVAKGLSYLFDELPTLTIPHGHMKSSNIVLDDSFEPLLTDYALRPMMSSEHAH-----NFMTAYKSPEYRPSKGQIITKKTDVWCFGVLILEVLTGRFPENYLTQGYDSNMSLV 587          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.545e-24
Identity = 85/287 (29.62%), Postives = 141/287 (49.13%), Query Frame = 3
Query:  105 PAEDDSELQL----GQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQS------------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTV----GHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRVKGYPXRE 869
            P +D+ E ++    G    F L +L  A+       ILG+G     YK  + D   V VKRL+E     G  +F+ +++I+    H N+  L  +  +  +KL VY Y + G++   L  + S                        S  PLDW +R +IA+G+ARGL+ +HE  D K +H ++K++NI  + +    + D GL        THIT ++  T     G+ APE   T +S++ +DV+ +G++LLEL+TG+     + L+ DEN+ L   ++    +E
Sbjct:   33 PEDDNDEGKIVFFGGSNYTFDLDDLLAAS-----AEILGKGAHVTTYKVAVEDTATVVVKRLEEVVV--GRREFEQQMEIVGRIRHDNVAELKAYYYSKIDKLAVYSYYSQGNLFEMLHGKLSFCIPLSMLLWYAVSKTNNSTFAGESQVPLDWESRLRIAIGAARGLAIIHEADDGKFVHGNIKSSNIFTNSKCYGCICDLGL--------THITKSLPQTTLRSSGYHAPEITDTRKSTQFSDVYSFGVVLLELLTGKS--PASPLSLDENMDLASWIRSVVSKE 302          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.018e-24
Identity = 69/194 (35.57%), Postives = 109/194 (56.19%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            +GRGG+G+V++G    G  VAVK L  +  +   +   + EV ++    H N++   G CT  +   +V  Y++ GS+A+ L +    +   DW  R ++    ARG++YLH   +P IIHRD+K  N+L+D+ ++  V DFGLA +   K       + GT G +APE L+    +EK DV+ Y I+L EL+T
Sbjct:  857 IGRGGYGQVFRGSWR-GTEVAVKMLFNDNVNLKLISDLRKEVDLLCKLRHPNIVLFMGACTEPSSPCIVTEYLSRGSLANILLDESIEM---DWGLRLQLGFDCARGMTYLHSR-NPIIIHRDLKTDNLLVDDSWQVKVADFGLATV---KSHTFAKTMCGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLT 1042          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.442e-24
Identity = 72/221 (32.58%), Postives = 110/221 (49.77%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKI----ISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            L + +L +L+ AT  F    +L  G  G  Y   L  G   A+K +       G     TEV I    ++   H NL  LCG+C    +++ +Y  +   ++ S L        P  W  R KIALG+AR L++LH  C P ++H +VKAA ILLD   E  + DFGL KL+D +            G+  PE       + ++DV+ +G++LLEL++G++
Sbjct:  506 LMKMTLADLKAATFNFDRGTMLWEGKSGPTYGAVLPGGFRAALKVIPS-----GTTLTDTEVSIAFERLARINHPNLFPLCGYCIATEQRIAIYEDLDMVNLQSLLHNNGDDSAP--WRLRHKIALGTARALAFLHHGCIPPMVHGEVKAATILLDSSQEPRLADFGLVKLLDEQ----FPGSESLDGYTPPEQERNASPTLESDVYSFGVVLLELVSGKK 715          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.442e-24
Identity = 68/198 (34.34%), Postives = 111/198 (56.06%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVT-EKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            ++ +  +G VYK +L+DG  +A+ RL  E T          ++ +    H NL+ L  F      EKLL+Y Y+ N S+   L E +   P L+W  R KIALG ARGL+YLH   +  IIH ++++ N+L+D+ F A + +FGL K+M         +   + G+ APE     + + ++DV+ +GI+LLE++ G++
Sbjct:  378 VMEKTSYGTVYKAKLSDGGNIAL-RLLREGTCKDRSSCLPVIRQLGRIRHENLVPLRAFYQGKRGEKLLIYDYLPNISLHDLLHESKPRKPALNWARRHKIALGIARGLAYLHTGQEVPIIHGNIRSKNVLVDDFFFARLTEFGLDKIMVQAVADEIVSQAKSDGYKAPELHKMKKCNPRSDVYAFGILLLEILMGKK 574          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y4294_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.495e-24
Identity = 85/223 (38.12%), Postives = 124/223 (55.61%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFC--TTVTEKLLVYRYMANGSVASRLRERQSSL-PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGR--SSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRVK 851
            +LGR   G  Y+  L +G  + VK L+E   +    +F  EVK  S   H N++ L G+    T  EKL++  Y++ GS+AS L +R     PPL W  R KIA+  ARGL+YL  H D  + H ++KA NILLD  E  A V D+ L +LM    T       G +G+ APE  ++ +   S K+DV+ +G++LLE++TG+ A D+ +    E V L D V+
Sbjct:  759 VLGRSSHGTSYRATLDNGVFLTVKWLREG-VAKQRKEFAKEVKKFSNIRHPNVVTLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLAWTQRLKIAVDVARGLNYL--HFDRAVPHGNLKATNILLDGAELNARVADYCLHRLMTQAGTVEQILDAGILGYRAPELAASRKPLPSFKSDVYAFGVILLEILTGRCAGDV-ITGEQEGVDLTDWVR 977          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y4312_ARATH1.143e-2736.41Probable LRR receptor-like serine/threonine-protei... [more]
RPKL_ARATH4.803e-2636.55Receptor protein kinase-like protein At4g34220 OS=... [more]
Y5332_ARATH4.066e-2531.19Probable inactive receptor kinase At5g53320 OS=Ara... [more]
Y5694_ARATH6.935e-2532.23Probably inactive leucine-rich repeat receptor-lik... [more]
Y1061_ARATH6.935e-2533.47Probably inactive leucine-rich repeat receptor-lik... [more]
Y5168_ARATH1.545e-2429.62Probably inactive receptor-like protein kinase At5... [more]
DRKD_DICDI2.018e-2435.57Probable serine/threonine-protein kinase drkD OS=D... [more]
Y5815_ARATH3.442e-2432.58Probably inactive leucine-rich repeat receptor-lik... [more]
TMKL1_ARATH3.442e-2434.34Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
Y4294_ARATH4.495e-2438.12Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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