DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: IRAK2_PONAB (Interleukin-1 receptor-associated kinase-like 2 OS=Pongo abelii GN=IRAK2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.727e-21
Identity = 83/261 (31.80%), Postives = 125/261 (47.89%), Query Frame = 3
Query:   81 PHEFFFDVPAEDDSE------------LQL-GQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQ--FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY----KDTHITTAVHGTVGHIAPE-YLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            PH    D+P   DS+            L L G    +S  ++  ATD F+  + + +G F  VY+G    G     K+L+E   S  G ++  FQ E++I     H N+L + GFC        +Y YMANGS+  RL + Q    PL WP R  I  G    + YLH     +IIH +VK++N+LLD+     +    +A L       K T + T +  T     PE ++  G+ +++ D+F  GI+L E++TG  A D
Sbjct:  162 PHSLRTDLPTSSDSKDFSTSIPKQEKLLSLAGDSLFWSEADVVQATDDFNQNHKISQGTFADVYRG-YRHGTPFVFKKLRETACSSPGSIERFFQAELQICLRCCHPNVLPVLGFCAARQFHSFIYPYMANGSLQDRL-QGQGGSDPLPWPQRVSICSGLLCAVEYLH---GLEIIHSNVKSSNVLLDQNLTPKLA-HPMAHLCPVNKRSKYTMMKTHLFRTSAAYLPEDFIRVGQLTKRVDIFSCGIVLAEVLTGIPAMD 416          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.562e-21
Identity = 75/247 (30.36%), Postives = 128/247 (51.82%), Query Frame = 3
Query:   66 WRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL--KEERTSGG-ELQFQTEVKIISMAVHRNLLGLCGFCTTVTE--KLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            W+++   +  F V    DSE+ L  + R + +EL+VA + FSN  I+G     ++YKG L  G  +AV  L  KEE  +G  EL FQ EV  ++   H N   L G+C  ++   ++LV+ Y +NG++   L   +++L  + W  R KI +G ARGL YLH   DP     ++ +  I L E+F   + DF   K ++   + ++          + P  + +       +++ +GI+LLE+++G+
Sbjct:  325 WKKSSSEKEKFTVYV--DSEM-LKDVSRLTRQELEVACEDFSN--IIGLSADSQIYKGTLKGGSEIAVISLCVKEEDWTGYLELYFQREVADLARLNHENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHYGEAAL--VSWARRMKIVIGIARGLKYLHMELDPPFTISELSSNAIYLTEDFTPKLVDFECWKTILARSEKNLRNISSQGSICVLPNGMESRYLDVSGNIYAFGILLLEIVSGR 564          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: YTYK2_DICDI (Probable tyrosine-protein kinase DDB_G0283397 OS=Dictyostelium discoideum GN=DDB_G0283397 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 6.075e-21
Identity = 85/259 (32.82%), Postives = 137/259 (52.90%), Query Frame = 3
Query:  129 QLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL---KEERTSGGELQFQTEVKIISMAVHRN---LLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQS-SLPPLDWPTRKKIALGSARGLSYLHEHC-DPKIIHRDVKAANILLDEEFE-AVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT------GQRAFDLAMLANDENVMLLDRVKGYP 860
            QL +LK  +L++ ++ +   + +  +G+G FGKVYK R   GK VA+K++   K    +  E+ F  EV I+S   H      +G C       ++ ++  YM  GS+   L E+ S  LPP     +  IA   A G++YLH +  +  I+HRD+ ++NILL+  +  A + DFGL+K M    T +T A+ G++  +APE       +EK DV+ + I+L E++T      G     LA LA+ E+  L   + G+P
Sbjct:  159 QLVKLKS-TLKKHEIPSRELTVEKEIGQGFFGKVYKARWR-GKSVALKKITLIKFRDLTETEI-FDKEVSIMSKLCHPTCVMFIGACSLDGPSNDRSIIMEYMEGGSLRRLLDEKSSYHLPP---SLQLSIARDIAEGMNYLHTNFKEGPIVHRDLTSSNILLNSSYTVAKINDFGLSKEMKPGPTEMTAAM-GSLAWMAPECFKAENYTEKVDVYSFAIILWEIVTCRDPYNGMEPLRLAFLASVEDYRL--PLNGFP 408          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 6.075e-21
Identity = 69/205 (33.66%), Postives = 110/205 (53.66%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGE---LQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGS----VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            +G+G F KV KG    GK VAVK+L   +    E    +F+ EV+++    H NL+   G+  ++    +V  ++ +G+    + S+  E+Q S+  LD      IA   ARG+ +LH      IIHRD+K++N+L+D+ F   + D G+A+   +  T  T    GTV   APE L     ++K DV+ Y I+L EL+TG+  +
Sbjct: 1079 IGKGHFSKVLKGNWK-GKDVAVKKLNSNKDKAREEMIQEFKAEVELLGSLQHPNLVTCYGY--SLNPMCIVMEFLPSGNLFELIHSKPSEQQQSIK-LDSTLILAIAFDIARGMQHLHTR---NIIHRDLKSSNLLMDKHFNIKIADLGIARETSFTQTMTTI---GTVAWTAPEILRHESYNQKADVYSYAIVLYELLTGEEPY 1273          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: TNI3K_MOUSE (Serine/threonine-protein kinase TNNI3K OS=Mus musculus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 7.935e-21
Identity = 73/203 (35.96%), Postives = 108/203 (53.20%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKL-LVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPE-YLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            I+G G FGKVYKGR  + K+VA+KR +     +      F  EV I+    H  ++   G C     +  +V +Y++ GS+ S L E++  L   D  ++  IA+  A+G+ YLH    P IIHRD+ + NILL E+  AVV DFG ++ +   D    T   G +  +APE +    R + K DVF Y + L EL+ G+  F
Sbjct:  467 IIGSGSFGKVYKGRCRN-KIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFSLLHEQKRIL---DLQSKLIIAVDVAKGMEYLHSLTQP-IIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWELLIGEIPF 664          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.935e-21
Identity = 73/240 (30.42%), Postives = 121/240 (50.42%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL-----AMLANDENVMLLDRVKG 854
            +S  E+  AT+ F     LG G +G VYKG L   + VAVK L     S    +F+  V+I+S   H NL+ L G C     + L+Y+Y+ NGS+       ++++P L W +R +IA      L +LH +  P IIH ++K + ILLD      + D+G+++L+          +  +  H+ P Y  +   + ++D++ +GI+LL+L+T +    +       L ND    +LD   G
Sbjct:  448 YSFMEINEATNEFDPSWKLGEGKYGSVYKGNLQHLQ-VAVKMLPSYG-SLNHFEFERRVEILSRVRHPNLVTLMGACPE--SRSLIYQYIPNGSLEDCFSS-ENNVPALSWESRIRIASEICSALLFLHSNI-PCIIHGNLKPSKILLDSNLVTKINDYGISQLIP------IDGLDKSDPHVDPHYFVSREMTLESDIYAFGIILLQLLTRRPVSGILRDVKCALENDNISAVLDNSAG 675          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: GEFX_DICDI (RasGEF domain-containing serine/threonine-protein kinase X OS=Dictyostelium discoideum GN=gefX PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.935e-21
Identity = 66/198 (33.33%), Postives = 103/198 (52.02%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY--KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +G+G FG V++G    G  VA+K++++            EV ++    H  ++   G C   +   +V  +++ G V   L++     PP+ W  R  IA+  A+ + +LH     KIIHRD+K+ NILLDE     + DFG A++ +   K  H+T    GT G +APE L         DVF YG++L ELITG++
Sbjct:   27 IGKGSFGSVFRGCYL-GLDVAIKKIEKADDPEYLKYIDREVSMLQSLRHPFIVNFSGICVHSSGLYIVTEFVSGGDVRQLLKKT----PPIGWDKRVSIAVDLAKAMVFLHAK---KIIHRDLKSKNILLDEFQRIRLCDFGFARMSEQTKKSRHMTMC--GTEGWVAPEILLGMSYDTSCDVFSYGVVLAELITGRK 214          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.935e-21
Identity = 65/196 (33.16%), Postives = 103/196 (52.55%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGEL-QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +G+G FG+VY G    G  VAVK+L     +   L +F  E+ ++    H N++   G C    +  +   YM  GS+ S L   +  +    W   K++ + +A+G+ YLH    P I+HRD+K+ N+L+DE ++  V DFGL+ +   +    T    GT    +PE L + R +EK DV+ +GI+L E  T Q
Sbjct:  397 IGKGNFGEVYLGTWR-GSQVAVKKLPAHNINENILKEFHREINLMKNLRHPNVIQFLGSCLISPDICICTEYMPRGSLYSILHNEKIKI---SWSLVKRMMIDAAKGIIYLHGST-PVILHRDLKSHNLLVDENWKVKVADFGLSTI---EQQGATMTACGTPCWTSPEVLRSQRYTEKADVYSFGIILWECATRQ 584          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SHKE_DICDI (Dual specificity protein kinase shkE OS=Dictyostelium discoideum GN=shkE PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.036e-20
Identity = 67/202 (33.17%), Postives = 111/202 (54.95%), Query Frame = 3
Query:  198 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            ++LG G +GKVYK     GK VAVK  K++  S  EL+ F+ EV+I+    H N++   G CT   + ++V   M    +   +   +   PPL    R K+ L +A G+++LH  C+  IIHRD+K AN+++ ++    +GDFG ++++    T        GT  ++APE +     +EK DV+ +G++L E+ T +  F
Sbjct:  241 DLLGGGAYGKVYKA-TCRGKKVAVKVPKKQTLSESELKSFKNEVEIMKQIFHPNVVLCLGACTKPGKVMIVSELMQT-DLEKLIHSSEVEPPPL--YERMKMCLDAALGINWLHGICN--IIHRDLKLANLMISKDKTVKIGDFGFSQVIKTGTTLSDQKGPKGTALYMAPEVMMKHEFNEKADVYSFGLILYEMATCEELF 436          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SHKB_DICDI (Dual specificity protein kinase shkB OS=Dictyostelium discoideum GN=shkB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.353e-20
Identity = 73/205 (35.61%), Postives = 110/205 (53.66%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLK----EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            LG G FG VYKG +  GK VA+K+L     EE T     +F+ EV +++   + +LL   G CT   +  +V   M  GSV S LR ++ +   + +     IA  +  G+++LH      I+H D+K AN+L+D+ +   V DFGL+K M  D KD  +  A  G+  ++APE L       K DVF + I+L EL+T Q  ++
Sbjct:  180 LGSGAFGSVYKG-IVRGKEVAIKKLTQTVFEENTMN---EFKKEVSLMAKLRNPHLLLFMGACTAPEDLSIVTELMPKGSVHSLLRAKEDTSDFITFKRAILIARDTVLGMTWLHAS---NILHLDLKPANLLVDQNWVVKVADFGLSKYMKPDSKDKLLGQA--GSPLYMAPEMLVNQPYDGKVDVFSFSILLWELLTKQEPYN 375          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IRAK2_PONAB2.727e-2131.80Interleukin-1 receptor-associated kinase-like 2 OS... [more]
Y1634_ARATH3.562e-2130.36Probable LRR receptor-like serine/threonine-protei... [more]
YTYK2_DICDI6.075e-2132.82Probable tyrosine-protein kinase DDB_G0283397 OS=D... [more]
Y9963_DICDI6.075e-2133.66Probable serine/threonine-protein kinase DDB_G0272... [more]
TNI3K_MOUSE7.935e-2135.96Serine/threonine-protein kinase TNNI3K OS=Mus musc... [more]
PUB32_ARATH7.935e-2130.42U-box domain-containing protein 32 OS=Arabidopsis ... [more]
GEFX_DICDI7.935e-2133.33RasGEF domain-containing serine/threonine-protein ... [more]
DRKB_DICDI7.935e-2133.16Probable serine/threonine-protein kinase drkB OS=D... [more]
SHKE_DICDI1.036e-2033.17Dual specificity protein kinase shkE OS=Dictyostel... [more]
SHKB_DICDI1.353e-2035.61Dual specificity protein kinase shkB OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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