DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_MICMU (Hepatocyte growth factor receptor OS=Microcebus murinus GN=MET PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1279
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_HYLLE (Hepatocyte growth factor receptor OS=Hylobates leucogenys GN=MET PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1278
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_HUMAN (Hepatocyte growth factor receptor OS=Homo sapiens GN=MET PE=1 SV=4)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1278
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_GORGO (Hepatocyte growth factor receptor OS=Gorilla gorilla gorilla GN=MET PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1278
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_EULMM (Hepatocyte growth factor receptor OS=Eulemur macaco macaco GN=MET PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1279
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_COLGU (Hepatocyte growth factor receptor OS=Colobus guereza GN=MET PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1278
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_CERAE (Hepatocyte growth factor receptor OS=Cercopithecus aethiops GN=MET PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1278
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_CALMO (Hepatocyte growth factor receptor OS=Callicebus moloch GN=MET PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1278
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_CALJA (Hepatocyte growth factor receptor OS=Callithrix jacchus GN=MET PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1278
[Close]
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_ATEGE (Hepatocyte growth factor receptor OS=Ateles geoffroyi GN=MET PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 3 
Query:  201 ILGRGGFGKVYKGRLAD--GKLV--AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D  GK +  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1278
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MET_MICMU8.773e-2036.59Hepatocyte growth factor receptor OS=Microcebus mu... [more]
MET_HYLLE8.773e-2036.59Hepatocyte growth factor receptor OS=Hylobates leu... [more]
MET_HUMAN8.773e-2036.59Hepatocyte growth factor receptor OS=Homo sapiens ... [more]
MET_GORGO8.773e-2036.59Hepatocyte growth factor receptor OS=Gorilla goril... [more]
MET_EULMM8.773e-2036.59Hepatocyte growth factor receptor OS=Eulemur macac... [more]
MET_COLGU8.773e-2036.59Hepatocyte growth factor receptor OS=Colobus guere... [more]
MET_CERAE8.773e-2036.59Hepatocyte growth factor receptor OS=Cercopithecus... [more]
MET_CALMO8.773e-2036.59Hepatocyte growth factor receptor OS=Callicebus mo... [more]
MET_CALJA8.773e-2036.59Hepatocyte growth factor receptor OS=Callithrix ja... [more]
MET_ATEGE8.773e-2036.59Hepatocyte growth factor receptor OS=Ateles geoffr... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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