DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHA2_MOUSE (Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 7.427e-19
Identity = 65/211 (30.81%), Postives = 110/211 (52.13%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRL--ADGKL---VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + + ++G G FG+VYKG L  + GK    VA+K LK   T    + F +E  I+    H N++ L G  +     +++  YM NG++   LRE+      L      +   G A G+ YL    +   +HRD+ A NIL++      V DFGL++++  D + T+ T+     +   APE +S  + +  +DV+ YGI++ E++T G+R +
Sbjct:  615 ARQKVIGAGEFGEVYKGTLKASSGKKEIPVAIKTLKAGYTEKQRVDFLSEASIMGQFSHHNIIPLEGVVSKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIASGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMTYGERPY 819          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: KINX_DICDI (Probable serine/threonine-protein kinase kinX OS=Dictyostelium discoideum GN=kinX PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 9.700e-19
Identity = 60/197 (30.46%), Postives = 105/197 (53.30%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLK----EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            +G GGFGKV+KG    G  VA+K++     +      E     E++ I +  H N++   G         +V   +  G +   L+ +   LP   W  R  IAL  +  +SYLH      I+HRD+K+ N+L+D+ ++  V DFG A++++ +D + +  + GT   ++PE ++     E++D+F +GI+LLE+I+
Sbjct:   28 IGSGGFGKVFKGEYL-GAPVAIKKIHILPDDPNRVDLEKFLNREIETIKLFTHPNVIQFVGISENNGILFIVTELIEGGDLQYYLKNQSIDLP---WFLRANIALDVSLAMSYLHSK---SIVHRDLKSTNLLVDKNWKIKVCDFGFARIVE-EDNNKSMTICGTDNWMSPEMITGLDYDERSDIFSFGIVLLEIIS 216          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: FER_HUMAN (Proto-oncogene tyrosine-protein kinase Fer OS=Homo sapiens GN=FER PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 9.700e-19
Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLE 773
            +LG+G FG+VYKG L D   VAVK  KE+     +++F  E KI+    H N++ L G CT      ++   ++ G   + LR ++     L      K +L +A G+ YL        IHRD+ A N L+ E     + DFG+++  D      +      +   APE L+ GR S ++DV+ +GI+L E
Sbjct:  568 LLGKGNFGEVYKGTLKDKTSVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVSGGDFLTFLRRKKDE---LKLKQLVKFSLDAAAGMLYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWE 752          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHA1_HUMAN (Ephrin type-A receptor 1 OS=Homo sapiens GN=EPHA1 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 9.700e-19
Identity = 64/201 (31.84%), Postives = 107/201 (53.23%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIAL--GSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++G G FG+VY+G L     D K VA+K LK+    G    F  E  I+    H ++L L G  T     +++  +M NG++ + LRER+  L P      + +A+  G A G++YL  H     +HRD+ A NIL+++     V DFGL +L+ D+  T+ T      +   APE ++    +  +DV+ +GI++ E+++
Sbjct:  629 VIGEGEFGEVYRGTLRLPSQDCKTVAIKTLKDTSPGGQWWNFLREATIMGQFSHPHILHLEGVVTKRKPIMIITEFMENGALDAFLREREDQLVP-----GQLVAMLQGIASGMNYLSNH---NYVHRDLAARNILVNQNLCCKVSDFGLTRLLDDFDGTYETQGGKIPIRWTAPEAIAHRIFTTASDVWSFGIVMWEVLS 821          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_SHEEP (Hepatocyte growth factor receptor OS=Ovis aries GN=MET PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.267e-18
Identity = 72/205 (35.12%), Postives = 102/205 (49.76%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D        AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ +   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1279          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_PIG (Hepatocyte growth factor receptor OS=Sus scrofa GN=MET PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.267e-18
Identity = 72/205 (35.12%), Postives = 102/205 (49.76%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D        AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ +   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1278          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_MUNMU (Hepatocyte growth factor receptor OS=Muntiacus muntjak GN=MET PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.267e-18
Identity = 72/205 (35.12%), Postives = 102/205 (49.76%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D        AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ +   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1279          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_LOXAF (Hepatocyte growth factor receptor OS=Loxodonta africana GN=MET PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.267e-18
Identity = 73/205 (35.61%), Postives = 104/205 (50.73%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADG---KL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D    K+  AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ +   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1084 VIGRGHFGCVYHGTLLDNGDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1279          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_ECHTE (Hepatocyte growth factor receptor OS=Echinops telfairi GN=MET PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.267e-18
Identity = 73/205 (35.61%), Postives = 101/205 (49.27%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D        AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    S      PT K +    L  A+G+ YL      K +HRD+ A N +LD +F   V DFGLA+ M   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1082 VIGRGHFGCVYHGTLLDNDDRKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHS------PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDGKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1277          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MET_BOVIN (Hepatocyte growth factor receptor OS=Bos taurus GN=MET PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.267e-18
Identity = 72/205 (35.12%), Postives = 102/205 (49.76%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCT-TVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++GRG FG VY G L D        AVK L      G   QF TE  I+    H N+L L G C  +    L+V  YM +G + + +R    +      PT K +    L  A+G+ YL      K +HRD+ A N +LDE+F   V DFGLA+ +   +Y   H  T     V  +A E L T + + K+DV+ +G++L EL+T
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 1279          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA2_MOUSE7.427e-1930.81Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 ... [more]
KINX_DICDI9.700e-1930.46Probable serine/threonine-protein kinase kinX OS=D... [more]
FER_HUMAN9.700e-1932.46Proto-oncogene tyrosine-protein kinase Fer OS=Homo... [more]
EPHA1_HUMAN9.700e-1931.84Ephrin type-A receptor 1 OS=Homo sapiens GN=EPHA1 ... [more]
MET_SHEEP1.267e-1835.12Hepatocyte growth factor receptor OS=Ovis aries GN... [more]
MET_PIG1.267e-1835.12Hepatocyte growth factor receptor OS=Sus scrofa GN... [more]
MET_MUNMU1.267e-1835.12Hepatocyte growth factor receptor OS=Muntiacus mun... [more]
MET_LOXAF1.267e-1835.61Hepatocyte growth factor receptor OS=Loxodonta afr... [more]
MET_ECHTE1.267e-1835.61Hepatocyte growth factor receptor OS=Echinops telf... [more]
MET_BOVIN1.267e-1835.12Hepatocyte growth factor receptor OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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