DY258285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14 Identity = 52/159 (32.70%), Postives = 75/159 (47.17%), Query Frame = 3 Query: 24 YDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRK-----EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGL 485 Y K + L Y + G+E R+ R N YGP GR A RK + ++GDG QTRSF F+ + VEG++RL + + P N+G+ +M E+A+++ D I P E R D + KE LGW P + L+ GL Sbjct: 175 YGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGR--EKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMKLKDGL 330
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: RFBB_XANCP (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris GN=rfbB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.526e-13 Identity = 52/171 (30.41%), Postives = 82/171 (47.95%), Query Frame = 3 Query: 18 SCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG-PFNLGNPGEFTMLELAQVVQETIDPN--------AKIEFTPNTEHDPHNRK--PDISRAKELLGWEPKVSLRKGLPKMV 497 S Y K +D L +H G+ V N YGP + +++ +A AL EPL VYGDGKQ R + FVSD E + ++ VG +N+G E +E+ Q + +D + + + T+ H+R+ D S+ K+ LGWEP + +G+ + V Sbjct: 156 SPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIAQTV 324
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.993e-13 Identity = 45/165 (27.27%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 15 LSCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH-VGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGLPKMVKDF 506 +S Y KR+ + + YH G+++ R F YG D F + L + + VY G R F ++SD+V+G++R ++ + FNLGN ++ +++++ ++ AK +F P + D D+S++++LLG++PKV++ +GL + F Sbjct: 154 ISLYASTKRSNELMAHVYHHLYGIKMIGLRFFTVYGEYGRPD--MAYFKFAKNILLGKEIEVYNYGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNWF 316
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: RFBB_XANCB (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rfbB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.400e-13 Identity = 51/167 (30.54%), Postives = 80/167 (47.90%), Query Frame = 3 Query: 18 SCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG-PFNLGNPGEFTMLELAQVVQETIDPN--------AKIEFTPNTEHDPHNRK--PDISRAKELLGWEPKVSLRKGL 485 S Y K +D L +H G+ V N YGP + +++ +A AL EPL VYGDGKQ R + FVSD E + ++ VG +N+G E +E+ Q + +D + + + T+ H+R+ D S+ K+ LGWEP + +G+ Sbjct: 156 SPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGI 320
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: ACBB_ACTS5 (dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain 50/110) GN=acbB PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12 Identity = 50/166 (30.12%), Postives = 79/166 (47.59%), Query Frame = 3 Query: 18 SCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP-FNLGNPGEFTMLELAQVVQETID-PNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGLPKMVKDFR 509 S Y K +D L L YH+ G++V + R N YGPR + +++ FV L + VYGDG+ R + VSD GL + G +++G E T LEL +++ E P ++I F + + D S+ LG+ P+V G+ + V +R Sbjct: 150 SPYAASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGELGYRPRVDFTDGIAETVAWYR 313
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: TGDS_MOUSE (dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11 Identity = 49/170 (28.82%), Postives = 79/170 (46.47%), Query Frame = 3 Query: 24 YDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMR-LMEGEHVGPFNLGNPGEFTMLELA----QVVQETIDPNAKIEFTPNTEHDPHN--RKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQ 512 Y K A+ Y V I R N YGP + RV+ F++ ++G G Q R+F + +D+VE + L +GE +N+G E ++++LA Q+++ET + + PHN R P S LGW+PKV +G+ K V+ +R+ Sbjct: 166 YASSKAAAECFVQSYWERYKFPVVITRSSNVYGPHQYPE--RVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRK 333 The following BLAST results are available for this feature:
BLAST of DY258285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258285 ID=DY258285; Name=DY258285; organism=Citrus clementina; type=EST; length=873bpback to top |