DY258286

Overview
NameDY258286
Unique NameDY258286
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1115
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1069 contig Ccv1_Contig1069:1..1115. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY258286 vs. ExPASy Swiss-Prot
Match: UFOG_PETHY (Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.913e-23
Identity = 59/162 (36.42%), Postives = 93/162 (57.41%), Query Frame = 1 
Query:  304 WLDQQQPSSVIYAAFGSFTILDQVQFQELALGLEFCNRPFLWVVR----PDITTDANDRYPEGFQERVAARGRM-IGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNERYICDIWKVGLRFD-KNENGIIGREEIKNKVEQVLGD 771
            WL++ +  +VIY +FGS T L   Q +ELALGLE    PF  V+      D++ + N   PEGF ERV  +G +  GW  QQ +L H S+ C++ H G++S +E + N    +  P   +Q LN + +    + G+  + ++E+G  G+E+IK  VE+V+ D
Sbjct:  266 WLNKFEGGTVIYCSFGSETFLTDDQVKELALGLEQTGLPFFLVLNFPANVDVSAELNRALPEGFLERVKDKGIIHSGWVQQQNILAHSSVGCYVCHAGFSSVIEALVNDCQVVMLPQKGDQILNAKLVSGDMEAGVEINRRDEDGYFGKEDIKEAVEKVMVD 427
[Close]
BLAST of DY258286 vs. ExPASy Swiss-Prot
Match: FORT_ARATH (Flavonol-3-O-glucoside L-rhamnosyltransferase OS=Arabidopsis thaliana GN=UGT78D1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.520e-22
Identity = 64/200 (32.00%), Postives = 101/200 (50.50%), Query Frame = 1 
Query:  220 LPIGPLLASNRLGNTTGHFWREDSSCLEWLDQQQPSSVIYAAFGSFTILDQVQFQELALGLEFCNRPFLWVVRPDITTDANDRYPEGFQERVAARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNERYICDIWKVGLRFDKNENGIIGREEIKNKVEQVLGDQDFET---RALKLKGK 810
            L I PL     L +T+    R+   C  W+ ++  +SV Y +FG+       +   +A GLE    PF+W ++           P+GF +R   +G ++ WAPQ ++L H ++   ++HCGWNS +E VS G+P +  P  A+  LN R +  +WKVG+  D   NG+  +E  +  +  V    D +T    A KLK K
Sbjct:  239 LNIAPLTL---LSSTSEKEMRDPHGCFAWMGKRSAASVAYISFGTVMEPPPEELVAIAQGLESSKVPFVWSLKEKNMV----HLPKGFLDRTREQGIVVPWAPQVELLKHEAMGVNVTHCGWNSVLESVSAGVPMIGRPILADNRLNGRAVEVVWKVGVMMD---NGVFTKEGFEKCLNDVFVHDDGKTMKANAKKLKEK 428
The following BLAST results are available for this feature:
BLAST of DY258286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
UFOG_PETHY8.913e-2336.42Anthocyanidin 3-O-glucosyltransferase OS=Petunia h... [more]
FORT_ARATH1.520e-2232.00Flavonol-3-O-glucoside L-rhamnosyltransferase OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1AA08FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258286 ID=DY258286; Name=DY258286; organism=Citrus clementina; type=EST; length=1115bp
GGAACTCCGATGAGCAAGCAGATGTTTCGGATTGCACCAAATATGCCTGA
AATGAACGCTGGAGACTGTTTTTGGACAGACATGGGTGATTTGACCACGG
AGAGAATTCTTTTTGATTTAGCGGATAAAGACTTAAAAGCCATGAGAGCG
GTAAAATTCCAGTTGTGTCACTCAACGTATGAGCTCGAGGCTGGGGCATT
CACCGTGGTTCCGGAACTTCTGCCAATAGGACCACTTTTGGCAAGCAACC
GTCTAGGGAATACAACAGGACACTTCTGGCGCGAAGACTCAAGCTGTTTG
GAGTGGCTAGACCAACAGCAACCAAGCTCTGTCATTTACGCTGCTTTTGG
CAGCTTTACAATTCTTGACCAAGTTCAGTTTCAAGAATTAGCATTGGGAC
TAGAATTTTGCAACAGACCATTTTTATGGGTTGTGAGGCCAGATATTACC
ACCGATGCAAATGATAGATACCCAGAAGGATTTCAAGAGAGAGTTGCTGC
TCGAGGACGGATGATCGGCTGGGCACCTCAGCAGAAGGTTCTTAACCACC
CTTCTATTGCCTGTTTCCTGAGCCATTGTGGTTGGAATTCCACCATGGAA
GGTGTCAGCAATGGCATTCCTTTCTTGTGCTGGCCATATTTTGCTGAACA
ATTCCTGAACGAGAGATACATTTGTGATATTTGGAAGGTGGGATTGAGGT
TTGACAAAAACGAAAATGGCATCATTGGAAGAGAAGAAATTAAGAACAAG
GTGGAGCAAGTGCTCGGTGATCAAGATTTTGAAACAAGGGCTTTGAAACT
CAAGGGAAAGCCATGAACTGCATCAGAGAAGGTGTTTCCTCTCGCAAGAA
ATTTCAAATTTCCTTTGATGGGGTAAAGAACCCCCTGGCACATAATTCCC
CGGTAATGGGCGGTTAATTCAAAAATACACCCTTCGCCTTTTAATTTTTT
TATTATGTTTATAGTGTTTAGGAATATTTTATTTAACCGGATTGTAATTT
AATTTGTTTTCCCAATTTCCTTATTTTTTTTCCTACCCAAACATGAAGGT
TATTATTCCAAACCTATAGGGGAAGGAGCCCTCCCCCTTAAAAACCAGGG
ATCCCTTTGGCCCCC
back to top