DY258302

Overview
NameDY258302
Unique NameDY258302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1289
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258302_ssr17 microsatellite DY258302_ssr17:17..42. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1075 contig Ccv1_Contig1075:1..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.404e-22
Identity = 71/222 (31.98%), Postives = 108/222 (48.65%), Query Frame = 2
Query:  263 GKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            G +   T+    +F  + +  AT  FS  NI+   G      V+ G L N   VA+KR SK +   +R+F  E   V  L    L  L+G C E +E++LV EF+PN++L   LF    Q  + W  R  +   + + + Y     R   ++ DL A  IL D D NP+++ FG        ++  + K  +    + PPEY+R G+ +  S VYSFG L+L
Sbjct:  312 GSSTDITITHSLQFDFKAIEDATNKFSESNIIGRGGFGE---VFMGVL-NGTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVL 529          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 3.140e-22
Identity = 73/221 (33.03%), Postives = 114/221 (51.58%), Query Frame = 2
Query:  266 KNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSS------FGPYENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            ++D  T  S   +  + +  AT  FS  N + E G  +   VYKGKL N   VAVKR SK +   +R+F  EA  V  L+   L  L+G C E +E++L+ EF+ N++L   LF  E Q  + W  R ++   +A+ + Y    S+ + ++ DL A  IL D D NP+++       FG  +   +    +   A+  PEY   G+ + +S +YSFG L+L
Sbjct:  327 ESDISTTDSLV-YDFKTIEAATNKFSTSNKLGEGGFGA---VYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVL 543          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.101e-22
Identity = 70/209 (33.49%), Postives = 110/209 (52.63%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            F+L+ L  AT  F+P N++ E G     +VY+GKL N   VAVK+         ++F  E +A+G++R + L  L+G C E   R+LV E++ +  L + L     Q   + W  R+++    AQAL Y   + + + ++ D+ A  IL D + N +LS FG  +    G+S+ T        +  PEY  TG +  +S +YSFG LLL
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGY---GVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLL 376          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 6.996e-22
Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 2
Query:  266 KNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF-HWETQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST------NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            +ND  T  S  +F  + +  AT +F   N +   G      V+KG   N   VAVKR SK +     +F  E   V  L+   L  L+G   E +E++LV E+MPN++L   LF H     + W  R  +   + + + Y     R   ++ DL A  IL D D NP+++ FG   N R  ++ +T         + PPEY+  G+ + +S VYSFG L+L
Sbjct:  312 ENDITTSGSL-QFDFKAIEAATNNFQKSNKLGHGGFGE---VFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLIL 528          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.137e-22
Identity = 69/214 (32.24%), Postives = 112/214 (52.34%), Query Frame = 2
Query:  284 VPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYSTNL-----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            V S   FS ++L  AT +F+ + ++ + G+ +   VYKG L + R VAVKR    +     +F+ E   +  +    +  L+GCC E +  +LV E +PN  L K L H  +   M W +RLR+++ +A AL Y  S+    +YH D+    IL D+    ++S FG   +    +++ T L      +  PEY +T + T +S VYSFG +L+
Sbjct:  403 VQSSKIFSSKELEKATDNFNMNRVLGQGGQGT---VYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLV 613          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.193e-21
Identity = 68/209 (32.54%), Postives = 109/209 (52.15%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS  +L  AT +F+ + ++ + G+ +   VYKG L + R VAVKR    +     +F+ E   +  +    +  L+GCC E +  +LV EF+PN  L K L H E+    M W +RL +A+ +A AL Y  S+    +YH D+    IL D+    ++S FG   +    +++ T        +  PEY ++ K T +S VYSFG +L+
Sbjct:  404 FSSHELEKATDNFNKNRVLGQGGQGT---VYKGMLVDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRL-HDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLV 608          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.558e-21
Identity = 66/208 (31.73%), Postives = 111/208 (53.37%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSY-----STNLAFTPPEYMRTGKVTPESVVYSFGTLL 898
            F+ ++L  AT +FS + ++   G+ +   VYKG L + R VAVK+    +    ++F+ E   +  +    +  L+GCC E +  +LV EF+ N  L KH+   E+    M W MRLR+A+ +A AL Y  SS    +YH D+ +  IL D+    +++ FG   +    +++     S  + +  PEY ++ + T +S VYSFG +L
Sbjct:  441 FNSRELEKATENFSENRVLGHGGQGT---VYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVIL 645          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.558e-21
Identity = 76/231 (32.90%), Postives = 114/231 (49.35%), Query Frame = 2
Query:  242 SSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDN-DRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET--QPMKWAMRLRVALYLAQALEYCSSK--GRALYHDLHAYRILFDKDGNPRLSSFG--PYENSRDGKSYSTNL----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            S D+     ND+ T      F+ Q+L  AT +F  D  + E G      V+KG ++  D+ VA+K+  +      R+F+ E   +       L  LIG C E D+RLLV E+MP  +L  HL    +  +P+ W  R+++A   A+ LEY   +     +Y DL    IL  +D  P+LS FG      S D    ST +     +  P+Y  TG++T +S +YSFG +LL
Sbjct:   71 SLDVKGLNLNDQVTGKKAQTFTFQELAEATGNFRSDCFLGEGGFGK---VFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLL 298          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 2.035e-21
Identity = 66/208 (31.73%), Postives = 110/208 (52.88%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSY-----STNLAFTPPEYMRTGKVTPESVVYSFGTLL 898
            F+ ++L  AT +FS + ++   G+ +   VYKG L + R VAVK+    +    ++F+ E   +  +    +  L+GCC E +  +LV EF+ N  L KH+   E     M W MRLR+A+ +A AL Y  S+    +YH D+ +  IL D+    +++ FG   +    +++     S  + +  PEY R+ + T +S VYSFG +L
Sbjct:  432 FTSKELEKATENFSENRVLGHGGQGT---VYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVIL 636          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.472e-21
Identity = 79/241 (32.78%), Postives = 124/241 (51.45%), Query Frame = 2
Query:  218 HLKSSVLESSDLDSGGK-NDRQTVP--SFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSK--FNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK--HLFHWETQPMKWAMRLRVALYLAQALEY----CSSKGRALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYSTNL--AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            ++ S V+  +D +   K N ++T    S  EF L  L++AT +FSP N++   GE S   VY+ K  + R +AVK+     F+   S        ++  +R + +A L+G C E    +LV E+  N +L +  HL    ++P+ W  R+R+AL  A+A+EY    CS     ++ ++ +  IL D D NPRLS +G    S+     S NL   +  PE       TP+S VYSFG ++L
Sbjct:  361 YVSSRVMSFTDTEFANKLNAKRTTSTRSAVEFELSDLQSATANFSPGNLL---GEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPS--VMHKNIKSSNILLDADLNPRLSDYG---LSKFYLRTSQNLGEGYNAPEARDPSAYTPKSDVYSFGVVML 593          
The following BLAST results are available for this feature:
BLAST of DY258302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
CRK14_ARATH2.404e-2231.98Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK11_ARATH3.140e-2233.03Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y2296_ARATH4.101e-2233.49Probable receptor-like protein kinase At2g42960 OS... [more]
CRK16_ARATH6.996e-2232.13Putative cysteine-rich receptor-like protein kinas... [more]
WAKLI_ARATH9.137e-2232.24Wall-associated receptor kinase-like 22 OS=Arabido... [more]
WAKLB_ARATH1.193e-2132.54Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAKLN_ARATH1.558e-2131.73Wall-associated receptor kinase-like 18 OS=Arabido... [more]
RLCK7_ARATH1.558e-2132.90Probable serine/threonine-protein kinase RLCKVII O... [more]
WAKLM_ARATH2.035e-2131.73Wall-associated receptor kinase-like 17 OS=Arabido... [more]
SRF5_ARATH3.472e-2132.78Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AD07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258302 ID=DY258302; Name=DY258302; organism=Citrus clementina; type=EST; length=1289bp
TTATTTGACCGAGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGGAG
AGACCTATAGTCCTACAGAGTGTTTTCGGTTTTCGGAGTTGCAGTTGCAC
GGAAGCAATGCCATACCGTCTGATCATTTGAAAAGCTTCTGATCGTTTGT
CCACCGTCTAATTTTTAATCAAATGGGGGGCCGTTGTTCCAAGTTTTCCA
TTTGCTGGTTCCACTGCCATCTCAAGTCTTCCGTCCTTGAATCCTCCGAT
CTCGACAGTGGGGGCAAAAACGACCGGCAAACAGTTCCGAGTTTCACTGA
GTTCAGCTTACAGCAACTGAGAACTGCCACGTGTGATTTCTCCCCCGACA
ACATAGTATCGGAACACGGTGAAAAATCTCCCAACATTGTTTACAAAGGG
AAGCTCGATAATGACCGTTGGGTCGCCGTTAAACGGTTCAGCAAATTCAA
CTGGCCCGATTCTCGCCAATTCCTCGAGGAGGCAAAGGCAGTGGGGAATT
TAAGGAGTGAGAGACTGGCGAATCTGATTGGTTGTTGCTATGAAGCCGAT
GAGAGATTGCTAGTCGCCGAGTTCATGCCGAATGAAACTCTTGCAAAACA
TCTCTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGGG
TGGCACTCTATTTGGCACAAGCTCTAGAATATTGCAGCAGCAAAGGGAGA
GCATTGTACCATGATCTNCATGCCTACAGAATCTTATTTGATAAGGATGG
CAATCCCAGGCTTTCTTCCTTTGGCCCTTATGAAAATAGTAGAGACGGTA
AAAGTTACAGCACTAACTTGGCTTTCACCCCACCCGAGTACATGAGAACA
GGTAAAGTGACCCCGGAAAGTGTTGTGTACAGCTTTGGCACCCTGTTGCT
AAATCTTCTGAGCGGCAAACCTATTCCCCCAGGCCTGCCCTTGATTTGAT
TCTAACCAGAATTTCTTATTGGTGATGACTCCGCCTCGGGAGGGCCTTTC
TCCAGGGAGAGGGGAACGAATTTAGGGGCGGTATACTTCCCCTTTTCTTG
CCGTCTGGAACCTCTGGAAAGGGCAAATGGTAATTCCCCTTGTTCATTTT
CCTCCGGGTCCCTTTCAAAAAAAACCCAAAGGTCTCCCTCTTTTGTTTTT
TTGGGGGGTTCCCCCCAGGGAAACCGCCCCCCTCTCCCCAAAACCCCCCT
GGGCTTTTTTACCCCCCCTCTGGGGGGGGAAGCGTTTGTTCCCAAAAGTG
GGGACCCCCCTTTCTGCGGCTCTTTTAACCGGTAAAAAA
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