DY258302

Overview
NameDY258302
Unique NameDY258302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1289
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258302_ssr17 microsatellite DY258302_ssr17:17..42. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1075 contig Ccv1_Contig1075:1..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.319e-20
Identity = 73/242 (30.17%), Postives = 116/242 (47.93%), Query Frame = 2
Query:  203 CWFHCHLKSSVLESSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            C+F    K +   +  LD   ++D+ T+ S  +   + ++ AT DFS +N +   G      VYKG   N   VAVKR SK +     +F  E   V NLR + L  ++G   E +ER+LV E++ N++L   LF   +   + W  R  +   +A+ + Y     R   ++ DL A  IL D D NP+++ FG        +  ++         +  PEY   G+ + +S VYSFG L+L
Sbjct:  295 CFFAKRAKKTYGTTPALD---EDDKTTIESL-QLDYRAIQAATNDFSENNKIGRGGFGD---VYKGTFSNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVL 529          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.723e-20
Identity = 73/221 (33.03%), Postives = 107/221 (48.42%), Query Frame = 2
Query:  269 NDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMK--WAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            ND  T  S  +F  + +  AT  F P N + + G      VYKG L +   VAVKR SK +    ++F  E   V  L+   L  L+G C E +E++LV EF+PN++L   LF   T  MK  W  R ++   +A+ + Y     R   ++ DL A  IL D D NP+++ FG        +     +       +  PEY   G+ + +S VYSFG L+L
Sbjct:  304 NDITTAGSL-QFDFKAIEAATNCFLPINKLGQGGFGE---VYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFD-STMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVL 519          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.250e-20
Identity = 71/216 (32.87%), Postives = 104/216 (48.15%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKL-------DNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADE----RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYSTNLA------FTPPEYMRTGKVTPESVVYSFGTLL 898
            FS ++L  AT  FS   ++ E G     IVYKGK+       D    VA+K+ ++      +Q+L E + +G +    +  LIG C E  E    RLLV E+M N +L  HLF   +  + W  RL + L  A+ L Y     + +Y D  +  +L D    P+LS FG      DG +     A      +  PEY++TG +  +S VYSFG +L
Sbjct:   74 FSYEELSKATYVFSRKLVIGEGGF---GIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYLHDL-KVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVL 285          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.250e-20
Identity = 67/209 (32.06%), Postives = 108/209 (51.67%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW--ETQPMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS ++L  AT +FS + I+ + G+ +   VYKG L + R VAVK+    +     +F+ E   +  +    +  L+GCC E    +LV EF+PN  L +HL     E     W +RLR+A+ +A AL Y  SS    +YH D+ +  I+ D+    ++S FG         ++ T      + +  PEY ++ + T +S VYSFG +L+
Sbjct:  435 FSSRELEKATENFSSNRILGQGGQGT---VYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLV 640          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.250e-20
Identity = 74/239 (30.96%), Postives = 117/239 (48.95%), Query Frame = 2
Query:  245 SDLDSGGKNDRQTV---PSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLD----------NDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLHAYRILFDKDGNPRLSSFGPYE-NSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            SD+ +G  +D   +   P+   ++   L+TAT +F PD+++ + G      VY+G +D          +   VA+KR +  +     ++  E   +G L    L  L+G C E  E LLV EFMP  +L  HLF     P  W +R+++ +  A+ L +  S  R  +Y D  A  IL D + + +LS FG  +    D KS+ T        +  PEYM TG +  +S V++FG +LL
Sbjct:   52 SDISTGIISDSGKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGK---VYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFR-RNDPFPWDLRIKIVIGAARGLAFLHSLQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLL 286          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.250e-20
Identity = 66/214 (30.84%), Postives = 112/214 (52.34%), Query Frame = 2
Query:  290 SFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKR--FSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF-HWETQPMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFG-----PYENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            S T+F  + L  AT  FS   ++ + G  +   V+ G L N + VAVKR  F+  +W +  +F  E   +  ++ + L  L+GC  E  E LLV E++PN++L + LF   +++ + W+ RL + L  A+ L Y    S  R ++ D+    +L D   NP+++ FG       + +      +  L +  PEY+  G++T ++ VYSFG L+L
Sbjct:  299 SKTKFKYETLEKATDYFSHKKMLGQGGNGT---VFLGILPNGKNVAVKRLVFNTRDWVE--EFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVL 507          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.250e-20
Identity = 72/219 (32.88%), Postives = 110/219 (50.23%), Query Frame = 2
Query:  272 DRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFG-----PYENSRDGKSYST-NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            D     S   F L+ + TAT +FS +N + + G  S   VYKG L + + +AVKR  K +     +F  E   +  L+   L  L+G C E DE +LV EF+PN +L   +F  E  + + W +R  +   +A+ L Y    S+ R ++ DL A  IL D + NP+++ FG       + +R   S       +  PEY   G+ + +S VYSFG +LL
Sbjct:  323 DSNNGQSMLRFDLRMIVTATNNFSLENKLGQGGFGS---VYKGILPSGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLL 538          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.939e-20
Identity = 71/214 (33.18%), Postives = 107/214 (50.00%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHLF-HWET--QPMKWAMRLRVALYLAQALEYCSSKGR-ALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYSTNL-----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            F +++L  AT +FS  N +   G      VYKG L +   +AVK+  +  +    +F  E + + NL+   L  L GC    D    +R LV ++M N  L  HLF   ET   P+ W  R  + L +A+ L Y     + A+YH D+    IL D D   R++ FG  + SR+G+S+ T        +  PEY   G++T +S VYSFG ++L
Sbjct:  283 FKIEELEKATNNFSQKNFIGRGGF---GFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVIL 493          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.939e-20
Identity = 67/211 (31.75%), Postives = 110/211 (52.13%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ----PMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYSTNL-----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS ++L+ AT +FS + ++ + G+ +   VYKG L   R VAVKR          +F+ E   +  +    +  L+GCC   +  +LV E++PN  L K L H +++     M W +RLR+A+ +A AL Y  S+    +YH D+    IL D+    ++S FG   +    +++ T L      +  PEY  + + T +S VYSFG +L+
Sbjct:  420 FSSKELKKATDNFSMNRVLGQGGQGT---VYKGMLAEGRIVAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRL-HEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLV 626          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.939e-20
Identity = 75/241 (31.12%), Postives = 115/241 (47.72%), Query Frame = 2
Query:  212 HCHLKSSVLESSDLDSGGK--NDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFG-----PYENSRDGKSYST-NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            +C L     ++ D  S  +  +D  T  S  +   + ++TAT DF+  N +   G      VYKG   N + VAVKR SK +     +F  E   V  L+   L  L+G   + +ER+LV E+MPN++L   LF    Q  + W  R  +   +A+ + Y     R   ++ DL A  IL D D NP+++ FG       + ++D  S       +  PEY   G+ + +S VYSFG L+L
Sbjct:  310 YCFLAQRTKKTFDTASASEVGDDMATADSL-QLDYRTIQTATNDFAESNKIGRGGFGE---VYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVL 546          
The following BLAST results are available for this feature:
BLAST of DY258302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
CRK7_ARATH1.319e-2030.17Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK19_ARATH1.723e-2033.03Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y5707_ARATH2.250e-2032.87Probable receptor-like protein kinase At5g47070 OS... [more]
WAKLH_ARATH2.250e-2032.06Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
CX32_ARATH2.250e-2030.96Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK42_ARATH2.250e-2030.84Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK37_ARATH2.250e-2032.88Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
Y1105_ARATH2.939e-2033.18Probable receptor-like protein kinase At1g11050 OS... [more]
WAKLF_ARATH2.939e-2031.75Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
CRK8_ARATH2.939e-2031.12Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AD07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258302 ID=DY258302; Name=DY258302; organism=Citrus clementina; type=EST; length=1289bp
TTATTTGACCGAGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGGAG
AGACCTATAGTCCTACAGAGTGTTTTCGGTTTTCGGAGTTGCAGTTGCAC
GGAAGCAATGCCATACCGTCTGATCATTTGAAAAGCTTCTGATCGTTTGT
CCACCGTCTAATTTTTAATCAAATGGGGGGCCGTTGTTCCAAGTTTTCCA
TTTGCTGGTTCCACTGCCATCTCAAGTCTTCCGTCCTTGAATCCTCCGAT
CTCGACAGTGGGGGCAAAAACGACCGGCAAACAGTTCCGAGTTTCACTGA
GTTCAGCTTACAGCAACTGAGAACTGCCACGTGTGATTTCTCCCCCGACA
ACATAGTATCGGAACACGGTGAAAAATCTCCCAACATTGTTTACAAAGGG
AAGCTCGATAATGACCGTTGGGTCGCCGTTAAACGGTTCAGCAAATTCAA
CTGGCCCGATTCTCGCCAATTCCTCGAGGAGGCAAAGGCAGTGGGGAATT
TAAGGAGTGAGAGACTGGCGAATCTGATTGGTTGTTGCTATGAAGCCGAT
GAGAGATTGCTAGTCGCCGAGTTCATGCCGAATGAAACTCTTGCAAAACA
TCTCTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGGG
TGGCACTCTATTTGGCACAAGCTCTAGAATATTGCAGCAGCAAAGGGAGA
GCATTGTACCATGATCTNCATGCCTACAGAATCTTATTTGATAAGGATGG
CAATCCCAGGCTTTCTTCCTTTGGCCCTTATGAAAATAGTAGAGACGGTA
AAAGTTACAGCACTAACTTGGCTTTCACCCCACCCGAGTACATGAGAACA
GGTAAAGTGACCCCGGAAAGTGTTGTGTACAGCTTTGGCACCCTGTTGCT
AAATCTTCTGAGCGGCAAACCTATTCCCCCAGGCCTGCCCTTGATTTGAT
TCTAACCAGAATTTCTTATTGGTGATGACTCCGCCTCGGGAGGGCCTTTC
TCCAGGGAGAGGGGAACGAATTTAGGGGCGGTATACTTCCCCTTTTCTTG
CCGTCTGGAACCTCTGGAAAGGGCAAATGGTAATTCCCCTTGTTCATTTT
CCTCCGGGTCCCTTTCAAAAAAAACCCAAAGGTCTCCCTCTTTTGTTTTT
TTGGGGGGTTCCCCCCAGGGAAACCGCCCCCCTCTCCCCAAAACCCCCCT
GGGCTTTTTTACCCCCCCTCTGGGGGGGGAAGCGTTTGTTCCCAAAAGTG
GGGACCCCCCTTTCTGCGGCTCTTTTAACCGGTAAAAAA
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