DY258302

Overview
NameDY258302
Unique NameDY258302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1289
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258302_ssr17 microsatellite DY258302_ssr17:17..42. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1075 contig Ccv1_Contig1075:1..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.939e-20
Identity = 71/239 (29.71%), Postives = 110/239 (46.03%), Query Frame = 2
Query:  212 HCHLKSSVLESSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            +C L     +S    S    D  T     +   + ++TAT DF   N + + G      VYKG L +   VAVKR SK +     +F  E   V  L+   L  L+G C + +ER+LV E++PN++L   LF   +   + W  R ++   +A+ + Y     R   ++ DL A  IL D D NP+++ FG        +   +         +  PEY   G+ + +S VYSFG L+L
Sbjct:  295 YCFLTRRARKSYYTPSAFAGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGE---VYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVL 530          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 3.839e-20
Identity = 64/208 (30.77%), Postives = 105/208 (50.48%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF-HWETQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYSTNL-----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS ++L  AT +FS D ++ + G+ +   VYK  L +   VAVKR    +     +F+ E   +  +    +  L+GCC E +  +LV E++PN  L K L   ++   M W +RLR+A+ +A AL Y  S       + D+    IL D+    ++S FG   +    +++ T L      +  PEY  + + T +S VYSFG +L+
Sbjct:  416 FSSRELEKATDNFSIDRVLGQGGQGT---VYKRMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLV 620          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.839e-20
Identity = 75/241 (31.12%), Postives = 115/241 (47.72%), Query Frame = 2
Query:  212 HCHLKSSVLESSDLDSGGK--NDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFG-----PYENSRDGKSYST-NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            +C L     ++ D  S  +  +D  T  S  +   + ++TAT DF+  N +   G      VYKG   N + VAVKR SK +     +F  E   V  L+   L  L+G   + +ER+LV E+MPN++L   LF    Q  + W  R  +   +A+ + Y     R   ++ DL A  IL D D NP+++ FG       + ++D  S       +  PEY   G+ + +S VYSFG L+L
Sbjct:  308 YCFLAKKKKKTFDTASASEVGDDMATADSL-QLDYRTIQTATNDFAESNKIGRGGFGE---VYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVL 544          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.839e-20
Identity = 72/237 (30.38%), Postives = 120/237 (50.63%), Query Frame = 2
Query:  224 KSSVLESSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKS----YSTNLA----FTPPEYMRTGKVTPESVVYSFGTLLL 901
            K+ VL  S L      D  +         + L+TAT +FS +N +   G  S   VYKG     + +AVKR S  +     +F  E   +  L+   L  LIG C + +ERLLV EF+ N +L + +F  E  Q + W +R ++   +A+ L Y    S+ R ++ DL A  IL D++ NP+++ FG  +    G++    +++ +A    +  PEY   G+ + ++ V+SFG L++
Sbjct:  319 KNKVLGKSPLSGSIAEDEFSNTESLLVHFETLKTATDNFSSENELGRGGFGS---VYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVI 552          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.839e-20
Identity = 75/215 (34.88%), Postives = 113/215 (52.56%), Query Frame = 2
Query:  299 EFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFN--WPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMK----WAMRLRVALYLAQALEYCSSKG--RALYHDLHAYRILFDKDGNPRLSSF-----GPYENSRD-GKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            EFS ++L  AT  FS D   S+ G+ S + V+KG L +   VAVKR  K +     S++F  E   +  L    L NL+G C +  ERLLV EFM + +L +HL H +   +K    WA R+ +A+  A+ +EY         ++ D+ +  IL D+D N R++ F     GP ++     +  +  L +  PEY R   +T +S VYSFG +LL
Sbjct:  492 EFSYEELEQATGGFSED---SQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHL-HGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLL 702          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 5.013e-20
Identity = 66/209 (31.58%), Postives = 110/209 (52.63%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYSTNL-----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS ++L+ AT +FS   ++   G+ S   VYKG + + + +AVKR    +     +F+ E   +  +    +  LIGCC E +  +LV E++PN  + K L H E+    M W +RLR+A+ +A AL Y  S+    +YH D+    IL D+    ++S FG   +    +++ T +      +  PEY  + + T +S VYSFG +L+
Sbjct:  420 FSSEELKKATDNFSVKRVL---GKGSQGTVYKGMMVDGKIIAVKRSKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRL-HDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLV 624          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 5.013e-20
Identity = 68/232 (29.31%), Postives = 111/232 (47.84%), Query Frame = 2
Query:  239 ESSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP-MKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFG--------PYENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            E  DL+     D Q +    +     +R AT DFS DN + E G  +   VYKG LD    +AVKR S  +     +F+ E   V  L+   L  L+G C + +ER+L+ EF  N +L  ++F    +  + W  R R+   +A+ L Y    S+ + ++ D+ A  +L D   NP+++ FG            +R     +    +  PEY  +G+ + ++ V+SFG L+L
Sbjct:  315 EGKDLEELMIKDAQLL----QLDFDTIRLATNDFSRDNQLGEGGFGA---VYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVL 539          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 6.548e-20
Identity = 65/216 (30.09%), Postives = 110/216 (50.93%), Query Frame = 2
Query:  284 VPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKR--FSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET-QPMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            VPS   F  + L  AT  F     + + G  S   VYKG L + R VAVK+  F+   W D  QF  E   +  ++ + L  L+GC  E  + LLV E++ N +L + LF   T   + W  R  + + +++ LEY    S+ + ++ D+    IL D++ +P+++ FG   +    K+ +       L +  PEY+  G++T ++ VY+FG L++
Sbjct:  300 VPSCVNFKYEMLEKATESFHDSMKLGQGGAGS---VYKGILPDGRIVAVKKLFFNTREWAD--QFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLII 510          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 8.552e-20
Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 2
Query:  272 DRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            D  T     +F  + +  AT  F P N + + G      VYKG   +   VAVKR SK +    ++F  E   V  L+   L  L+G C E +E++LV EF+PN++L   LF    Q  + W+ R ++   +A+ + Y     R   ++ DL A  IL D D NP+++ FG        +   + +       +  PEY   GK + +S VYSFG L+L
Sbjct:  322 DDITTAGSLQFDFKAIVAATDIFLPINKLGQGGFGE---VYKGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVL 537          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.117e-19
Identity = 69/221 (31.22%), Postives = 104/221 (47.06%), Query Frame = 2
Query:  266 KNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            + D  T     +F  + +  AT  FS  N + + G      VYKG L N   VAVKR SK +    ++F  E   V  L+   L  L+G C E +E++LV EF+ N++L   LF    Q  + W  R ++   +A+ + Y     R   ++ DL A  IL D D NP+++ FG        +     +       +  PEY   G+ + +S VYSFG L+L
Sbjct:  316 EEDDITTAGSLQFDFKVIEAATDKFSMCNKLGQGGFGQ---VYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVL 533          
The following BLAST results are available for this feature:
BLAST of DY258302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
CRK10_ARATH2.939e-2029.71Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
WAKLC_ARATH3.839e-2030.77Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
CRK6_ARATH3.839e-2031.12Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK29_ARATH3.839e-2030.38Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRI4_MAIZE3.839e-2034.88Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
WAKLE_ARATH5.013e-2031.58Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
CRK41_ARATH5.013e-2029.31Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK1_ARATH6.548e-2030.09Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
CRK20_ARATH8.552e-2031.51Putative cysteine-rich receptor-like protein kinas... [more]
CRK5_ARATH1.117e-1931.22Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AD07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258302 ID=DY258302; Name=DY258302; organism=Citrus clementina; type=EST; length=1289bp
TTATTTGACCGAGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGGAG
AGACCTATAGTCCTACAGAGTGTTTTCGGTTTTCGGAGTTGCAGTTGCAC
GGAAGCAATGCCATACCGTCTGATCATTTGAAAAGCTTCTGATCGTTTGT
CCACCGTCTAATTTTTAATCAAATGGGGGGCCGTTGTTCCAAGTTTTCCA
TTTGCTGGTTCCACTGCCATCTCAAGTCTTCCGTCCTTGAATCCTCCGAT
CTCGACAGTGGGGGCAAAAACGACCGGCAAACAGTTCCGAGTTTCACTGA
GTTCAGCTTACAGCAACTGAGAACTGCCACGTGTGATTTCTCCCCCGACA
ACATAGTATCGGAACACGGTGAAAAATCTCCCAACATTGTTTACAAAGGG
AAGCTCGATAATGACCGTTGGGTCGCCGTTAAACGGTTCAGCAAATTCAA
CTGGCCCGATTCTCGCCAATTCCTCGAGGAGGCAAAGGCAGTGGGGAATT
TAAGGAGTGAGAGACTGGCGAATCTGATTGGTTGTTGCTATGAAGCCGAT
GAGAGATTGCTAGTCGCCGAGTTCATGCCGAATGAAACTCTTGCAAAACA
TCTCTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGGG
TGGCACTCTATTTGGCACAAGCTCTAGAATATTGCAGCAGCAAAGGGAGA
GCATTGTACCATGATCTNCATGCCTACAGAATCTTATTTGATAAGGATGG
CAATCCCAGGCTTTCTTCCTTTGGCCCTTATGAAAATAGTAGAGACGGTA
AAAGTTACAGCACTAACTTGGCTTTCACCCCACCCGAGTACATGAGAACA
GGTAAAGTGACCCCGGAAAGTGTTGTGTACAGCTTTGGCACCCTGTTGCT
AAATCTTCTGAGCGGCAAACCTATTCCCCCAGGCCTGCCCTTGATTTGAT
TCTAACCAGAATTTCTTATTGGTGATGACTCCGCCTCGGGAGGGCCTTTC
TCCAGGGAGAGGGGAACGAATTTAGGGGCGGTATACTTCCCCTTTTCTTG
CCGTCTGGAACCTCTGGAAAGGGCAAATGGTAATTCCCCTTGTTCATTTT
CCTCCGGGTCCCTTTCAAAAAAAACCCAAAGGTCTCCCTCTTTTGTTTTT
TTGGGGGGTTCCCCCCAGGGAAACCGCCCCCCTCTCCCCAAAACCCCCCT
GGGCTTTTTTACCCCCCCTCTGGGGGGGGAAGCGTTTGTTCCCAAAAGTG
GGGACCCCCCTTTCTGCGGCTCTTTTAACCGGTAAAAAA
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