DY258302

Overview
NameDY258302
Unique NameDY258302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1289
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258302_ssr17 microsatellite DY258302_ssr17:17..42. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1075 contig Ccv1_Contig1075:1..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.117e-19
Identity = 77/230 (33.48%), Postives = 108/230 (46.96%), Query Frame = 2
Query:  266 KNDRQTVPSF-----TEFSLQ----QLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFG-----PYENSRDGKSYST-NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            KN     P+F     T  SLQ     +R AT  FS +N + + G      VYKG   N   VAVKR SK +     +F  E   V  L+   L  L+G      ER+LV E+MPN++L   LF    Q  + W  R +V   +A+ + Y     R   ++ DL A  IL D D NP+L+ FG       + +++  S       +  PEY   G+ + +S VYSFG L+L
Sbjct:  304 KNSSDNAPAFDGDDITTESLQLDYRMIRAATNKFSENNKIGQGGFGE---VYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVL 530          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.459e-19
Identity = 66/225 (29.33%), Postives = 110/225 (48.89%), Query Frame = 2
Query:  257 SGGKNDRQTVPSFT---EFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEY--CSSKGRALYHDLHAYRILFDKDGNPRLSSFG------PYENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLL 898
            +GG     T+ + T   +F+L ++R AT +F     +   G      VY+G+L++   +A+KR +  +     +F  E   +  LR   L +LIG C E +E +LV E+M N TL  HLF     P+ W  RL   +  A+ L Y    S+   ++ D+    IL D++   ++S FG        +++    +   +  +  PEY R  ++T +S VYSFG +L
Sbjct:  490 TGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGK---VYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVL 711          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.459e-19
Identity = 68/216 (31.48%), Postives = 111/216 (51.39%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET----QPMKWAMRLRVALYLAQALEYCSSKGR-ALYH-DLHAYRILFDKDGNPRLSSFG-----PYENSRDGKSY-----STNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            F+ +++  AT +FS DN++   G      V+K  L++    A+KR    N   + Q L E + +  +    L  L+GCC + +  LL+ EF+PN TL +HL H  +    +P+ W  RL++A   A+ L Y  S  +  +YH D+ +  IL D+  N ++S FG         + + +S+        L +  PEY R  ++T +S VYSFG +LL
Sbjct:  351 FTGREITKATNNFSKDNLIGTGGFGE---VFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHL-HGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLL 562          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.905e-19
Identity = 62/208 (29.81%), Postives = 111/208 (53.37%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF-HWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYH-DLHAYRILFDKDGNPRLSSFGPYEN-SRDGKSYST----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS ++L  AT +F+ + ++ + G+ +   VYKG L + R VAVK+ +  +    ++F+ E   +  +    +  L+GCC E +  +LV EF+PN  L +HL   ++     W +R+R+A+ ++ A  Y  +     +YH D+ +  IL D+    ++S FG   + S D   ++T     + +  PEY  +   T +S VYSFG +L+
Sbjct:  442 FSSRELEKATDNFNDNRVIGQGGQGT---VYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLV 646          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.488e-19
Identity = 71/213 (33.33%), Postives = 109/213 (51.17%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRW-VAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMRLRVALYLAQALEY--CSSKGRALYHDLHAYRILFDKDGNPRLSSF-----GPYENSRDGKS--YSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS+ ++++AT DF    I+   G  S   VYKG++D     VAVKR    +   +++F  E + +  LR   L +LIG C E +E +LV E+MP+ TL  HLF  +     P+ W  RL + +  A+ L+Y    +K   ++ D+    IL D++   ++S F     GP   S+   S        +  PEY R   +T +S VYSFG +LL
Sbjct:  506 FSIFEIKSATNDFEDKLIIGVGGFGS---VYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLL 715          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 2.488e-19
Identity = 61/209 (29.19%), Postives = 104/209 (49.76%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK--HLFHWETQPMKWAMRLRVALYLAQALEYCSS--KGRALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            ++L++L  AT     +N++ E G     IVY+G L +   VAVK          ++F  E + +G +R + L  L+G C E   R+LV +F+ N  L +  H    +  P+ W +R+ + L +A+ L Y     + + ++ D+ +  IL D+  N ++S FG  +      SY T        +  PEY  TG +  +S +YSFG L++
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGY---GIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIM 347          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.488e-19
Identity = 69/227 (30.40%), Postives = 119/227 (52.42%), Query Frame = 2
Query:  254 DSGGKNDRQTVPSFT-EFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFGP---YENSRDGKSYSTNL----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            +S  K++ + + + + +F    L+ AT  FS +N + E G  +   VYKG L + + +AVKR SK       +F  E   V  L+   L  L+G   E  ERLLV EF+P+ +L K +F   +   ++W +R ++   +A+ L Y    S+ R ++ DL A  IL D++  P+++ FG    ++     + Y+  +     +  PEY+  G+ + ++ VYSFG L+L
Sbjct:  315 NSENKHENENISTDSMKFDFSVLQDATSHFSLENKLGEGGFGA---VYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVL 538          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.250e-19
Identity = 64/209 (30.62%), Postives = 102/209 (48.80%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST------NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            F  + ++ AT +F   N +   G  +   VYKG   N   VA KR SK +     +F  E   V  L+ + L  L+G   E +E++LV EF+PN++L   LF   +   + W  R  +   + + + Y     R   ++ DL A  IL D + NP+++ FG   N R  ++ +          + PPEY+  G+ + +S VYSFG L+L
Sbjct:  351 FDFRAIKAATSNFHKSNKLGHGGFGA---VYKGMFPNGTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLIL 556          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.250e-19
Identity = 78/232 (33.62%), Postives = 116/232 (50.00%), Query Frame = 2
Query:  248 DLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKR--FSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMK----WAMRLRVALYLAQALEYCSSKG--RALYHDLHAYRILFDKDGNPRLSSF-----GPYEN-SRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            DLD   K  R  V     F+ ++L  A   F  ++IV   G+ S + VYKG L +   VAVKR   S     +S +F  E   +  L    L +L+G C E  ERLLV EFM + +L  HL H + + +K    W  R+ +A+  A+ +EY         ++ D+ +  IL D++ N R++ F     GP ++ S   +  +  L +  PEY R   +T +S VYSFG LLL
Sbjct:  487 DLDELQKRRRARV-----FTYEELEKAADGFKEESIV---GKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHL-HGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLL 709          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.244e-19
Identity = 68/211 (32.23%), Postives = 113/211 (53.55%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVK-RFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF--HWETQPMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFG-PYENSRDGKSYSTNL-----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS +++++AT +F         G  S   VY+GKL + + VAVK RF +     +  F+ E   +  +R + L +  G CYE   ++LV E++   +LA HL+    +   + W  RL+VA+  A+ L+Y    S+ R ++ D+ +  IL DKD N ++S FG   + ++   S+ T +      +  PEY  T ++T +S VYSFG +LL
Sbjct:  596 FSHKEIKSATRNFK-----EVIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQL-GADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLL 800          
The following BLAST results are available for this feature:
BLAST of DY258302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
CRK15_ARATH1.117e-1933.48Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
Y1357_ARATH1.459e-1929.33Probable receptor-like protein kinase At1g30570 OS... [more]
WAKLQ_ARATH1.459e-1931.48Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLL_ARATH1.905e-1929.81Putative wall-associated receptor kinase-like 13 O... [more]
Y5900_ARATH2.488e-1933.33Putative receptor-like protein kinase At5g39000 OS... [more]
Y1154_ARATH2.488e-1929.19Probable serine/threonine-protein kinase At1g01540... [more]
CRK26_ARATH2.488e-1930.40Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK21_ARATH3.250e-1930.62Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
ACR4_ARATH3.250e-1933.62Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y5487_ARATH4.244e-1932.23Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AD07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258302 ID=DY258302; Name=DY258302; organism=Citrus clementina; type=EST; length=1289bp
TTATTTGACCGAGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGGAG
AGACCTATAGTCCTACAGAGTGTTTTCGGTTTTCGGAGTTGCAGTTGCAC
GGAAGCAATGCCATACCGTCTGATCATTTGAAAAGCTTCTGATCGTTTGT
CCACCGTCTAATTTTTAATCAAATGGGGGGCCGTTGTTCCAAGTTTTCCA
TTTGCTGGTTCCACTGCCATCTCAAGTCTTCCGTCCTTGAATCCTCCGAT
CTCGACAGTGGGGGCAAAAACGACCGGCAAACAGTTCCGAGTTTCACTGA
GTTCAGCTTACAGCAACTGAGAACTGCCACGTGTGATTTCTCCCCCGACA
ACATAGTATCGGAACACGGTGAAAAATCTCCCAACATTGTTTACAAAGGG
AAGCTCGATAATGACCGTTGGGTCGCCGTTAAACGGTTCAGCAAATTCAA
CTGGCCCGATTCTCGCCAATTCCTCGAGGAGGCAAAGGCAGTGGGGAATT
TAAGGAGTGAGAGACTGGCGAATCTGATTGGTTGTTGCTATGAAGCCGAT
GAGAGATTGCTAGTCGCCGAGTTCATGCCGAATGAAACTCTTGCAAAACA
TCTCTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGGG
TGGCACTCTATTTGGCACAAGCTCTAGAATATTGCAGCAGCAAAGGGAGA
GCATTGTACCATGATCTNCATGCCTACAGAATCTTATTTGATAAGGATGG
CAATCCCAGGCTTTCTTCCTTTGGCCCTTATGAAAATAGTAGAGACGGTA
AAAGTTACAGCACTAACTTGGCTTTCACCCCACCCGAGTACATGAGAACA
GGTAAAGTGACCCCGGAAAGTGTTGTGTACAGCTTTGGCACCCTGTTGCT
AAATCTTCTGAGCGGCAAACCTATTCCCCCAGGCCTGCCCTTGATTTGAT
TCTAACCAGAATTTCTTATTGGTGATGACTCCGCCTCGGGAGGGCCTTTC
TCCAGGGAGAGGGGAACGAATTTAGGGGCGGTATACTTCCCCTTTTCTTG
CCGTCTGGAACCTCTGGAAAGGGCAAATGGTAATTCCCCTTGTTCATTTT
CCTCCGGGTCCCTTTCAAAAAAAACCCAAAGGTCTCCCTCTTTTGTTTTT
TTGGGGGGTTCCCCCCAGGGAAACCGCCCCCCTCTCCCCAAAACCCCCCT
GGGCTTTTTTACCCCCCCTCTGGGGGGGGAAGCGTTTGTTCCCAAAAGTG
GGGACCCCCCTTTCTGCGGCTCTTTTAACCGGTAAAAAA
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