DY258313

Overview
NameDY258313
Unique NameDY258313
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length939
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_MOUSE (Nascent polypeptide-associated complex subunit alpha OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.083e-39
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_HUMAN (Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.083e-39
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_BOVIN (Nascent polypeptide-associated complex subunit alpha OS=Bos taurus GN=NACA PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.083e-39
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACAM_MOUSE (Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.083e-39
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct: 2051 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_XENLA (Nascent polypeptide-associated complex subunit alpha OS=Xenopus laevis GN=naca PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.867e-39
Identity = 84/136 (61.76%), Postives = 105/136 (77.21%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDE GVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   77 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGETVSNIQENTQTPTVQEESEEEEVDEAGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 212          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_PONAB (Nascent polypeptide-associated complex subunit alpha OS=Pongo abelii GN=NACA PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.998e-38
Identity = 84/136 (61.76%), Postives = 105/136 (77.21%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDET VE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETDVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_CHILA (Nascent polypeptide-associated complex subunit alpha OS=Chinchilla lanigera PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.813e-38
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIE VM+QA V R++AV+ALK    +IV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIEWVMSQANVSRAKAVRALKNNSNNIVNAIMELT 214          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_DROME (Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.691e-37
Identity = 84/137 (61.31%), Postives = 107/137 (78.10%), Query Frame = 3
Query:  252 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMA----QDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            MLKLG+K I GV+RVT++KSKNILFVI+ PDV+K+P SDTYIVFGEAKIEDLS Q Q  AAE+FK P    G   S   ++++A    +D+E+VD+TGV+ KDIELV+TQA   R++A+KALK  + DIV+AIMELT
Sbjct:   80 MLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEA-AGAADSVGATTSVAPIAEEDEEDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELT 215          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACAD_HUMAN (NAC-alpha domain-containing protein 1 OS=Homo sapiens GN=NACAD PE=2 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 3.190e-36
Identity = 83/142 (58.45%), Postives = 105/142 (73.94%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNV---ASKPE-----SSAMAQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ I GV+R+T++KSKNILFVI+KPDVFKSP SDTY+VFGEAKIEDLS Q+   AAE+FKVP   +  V   A +P           +++EEVDE G+E +DIELVM QA V R++AV+AL+    DIV+AIMELT
Sbjct: 1420 AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGLELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELT 1561          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACP1_HUMAN (Putative nascent polypeptide-associated complex subunit alpha-like protein OS=Homo sapiens GN=NACAP1 PE=5 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.106e-36
Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            A  KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTY+VFGEAKIEDLS + Q  AAE+FKV      N+    ++  + +  +DEEVDETGVE KDIELV++QA V  ++AV+ALK ++ DIV+AIMELT
Sbjct:   78 ARFKLGLQQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYMVFGEAKIEDLSQEAQLAAAEKFKVQGEAVSNIQENTQTPTVQEGSEDEEVDETGVEIKDIELVLSQANVWGAKAVRALKNSN-DIVNAIMELT 212          
The following BLAST results are available for this feature:
BLAST of DY258313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_MOUSE3.083e-3962.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_HUMAN3.083e-3962.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOVIN3.083e-3962.50Nascent polypeptide-associated complex subunit alp... [more]
NACAM_MOUSE3.083e-3962.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_XENLA6.867e-3961.76Nascent polypeptide-associated complex subunit alp... [more]
NACA_PONAB1.998e-3861.76Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHILA5.813e-3861.03Nascent polypeptide-associated complex subunit alp... [more]
NACA_DROME1.691e-3761.31Nascent polypeptide-associated complex subunit alp... [more]
NACAD_HUMAN3.190e-3658.45NAC-alpha domain-containing protein 1 OS=Homo sapi... [more]
NACP1_HUMAN7.106e-3659.56Putative nascent polypeptide-associated complex su... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AF01FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258313 ID=DY258313; Name=DY258313; organism=Citrus clementina; type=EST; length=939bp
CCGCTTCTCGTTTTCAAGTCTCAACACCCAGCCCAAAAAAAATGACTGCT
CAGTCTCAAGAAGAGCTCCTCGCTGCCCATCTTGAAGAGCAAAAGCTCAA
CCCCGATGAGCCTGTAGTCGAGGACGACGATGATGAGGATGATGATGAGG
AGGATGAGGATGATGACAAGGATGAAGACGATGTGGAAGGGAAAGGAGAT
GGAAGTGGTCGCTCAAAACAGAGCAGGAGTGAAAAGAAGAGTCGGAAAGC
AATGTTGAAACTTGGAATGAAGCCAATCCCTGGTGTCAGTCGAGTTACAG
TTAAAAAGAGCAAAAATATTTTGTTTGTTATCTCCAAACCAGATGTTTTC
AAGAGTCCTACATCTGACACATACATTGTCTTTGGGGAAGCAAAGATCGA
GGATCTGAGTTCACAACTGCAAACTCAGGCTGCAGAGCAGTTCAAGGTCC
CTCCTCCTAACACAGGTAATGTGGCATCAAAGCCTGAGTCATCGGCCATG
GCTCAAGATGACGAAGAAGTAGATGAGACTGGTGTGGAGCCAAAGGACAT
TGAGTTGGTAATGACTCAAGCTGGGGTACCGAGGTCAAGGGCTGTGAAAG
CACTCAAAGCCGCAGATGGTGACATCGTTTCTGCCATTATGGAGCTAACA
AATTGATGGTCACTTTCTTAATTATGTTGCTCTGCTGAATGATCCCATAA
GGAAATCTTTTTTTTTTTTTTTTCTCGCTGTTACCATTTACAATTGAAGT
TGCAGATTTTTGCAGGCTTTATAACTTTTCTCTCTTTTTTTCCCCTCTTT
TTCCCTTGTGTATCAGCATGAAACAGCTTTTACTTAATGTTAGAACTAAA
ATGTTGTTATGCAAAATTCCAATCCGGGGGGGAAAATCAAGCCCAATGAG
GTTTTGAAATACTTTTTACCTCCTTACAAAACCTTTGGG
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