DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ANAVT (ATP synthase subunit beta OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpD PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.619e-58 Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K +IG + Q+IG VVDV+F G LP I AL + + L +EV Q +G+ +R +AM T+GLVRG V++TG+PI+VPVG+ TLGRI NV+GEP+D +G + + LPIHR AP E T+ + TGIKVVDLL PY+RGGKIGLFGGAGVGK ++ L+ Sbjct: 7 KTNIGYITQIIGPVVDVKFPSGKLPQIYNALTIKGTNEAGQELNLTVEVQQLLGDNQIRAVAMSSTDGLVRGLEVVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQETLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELI 176 HSP 2 Score: 73.559 bits (179), Expect = 1.619e-58 Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV++MELINN+A HGG SVFAGVGERT EGNDLY +M++ GVIN Sbjct: 168 KTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOTN (ATP synthase subunit beta OS=Geobacillus thermodenitrificans (strain NG80-2) GN=atpD PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.620e-58 Identity = 100/170 (58.82%), Postives = 122/170 (71.76%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR--------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDV+F+ G LP I AL++ H R L LEVA H+G+ VRTIAM T+GL+RG V++TG+PI+VPVG VTLGR+ NV+GEPID + D+ E PIHR AP F E ATE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVIQVMGPVVDVKFENGHLPAIYNALKI-QHQARNENEVDIDLTLEVALHLGDDTVRTIAMASTDGLIRGMEVVDTGAPISVPVGDVTLGRVFNVLGEPIDLQDDIPAEARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 69.3218 bits (168), Expect = 1.620e-58 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI+ Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVIS 209
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DESHD (ATP synthase subunit beta OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=atpD PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.620e-58 Identity = 93/165 (56.36%), Postives = 118/165 (71.52%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVV--DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ Q++GAVVDV F E LP I +A++V + + L LEVAQH+G VR +AM T+GL RG LNTG+PITVPVG TLGRI NV+G+ ID ++ T+ PIHR APAFV+Q +L TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 NIGKIVQIMGAVVDVEFASEALPEIYSAVKVTVPEKKIDLTLEVAQHLGNNTVRCVAMSSTDGLQRGMAALNTGAPITVPVGPATLGRIFNVLGKAIDNGEEVHTDTSYPIHRPAPAFVDQDPSTVMLETGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELI 166 HSP 2 Score: 69.3218 bits (168), Expect = 1.620e-58 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELINN+A HGG SVFAGVGERT EGNDL+ +M + GVI+ Sbjct: 158 KTVLIQELINNIAMEHGGLSVFAGVGERTREGNDLWNEMRESGVID 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CYACA (ATP synthase subunit beta, chloroplastic OS=Cyanidium caldarium GN=atpB PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 2.752e-58 Identity = 87/162 (53.70%), Postives = 115/162 (70.99%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR-LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q+IG V+D+ F +G LP + A+++ + + + EV Q +G+ VR +AM TEGL RG ++TG PI++PVG+ TLGRI NV+GEPIDEKG + + LPIHR AP F + T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGK L+ L+ Sbjct: 22 GKVIQIIGPVLDIVFPDGQLPKVFNAIKINNSNNNWITCEVQQLLGDNKVRAVAMSTTEGLKRGASAIDTGEPISIPVGKETLGRIFNVLGEPIDEKGPVISNDKLPIHRPAPKFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 183 HSP 2 Score: 78.1814 bits (191), Expect = 2.752e-58 Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLIMELINNVAKAHGG SVF GVGERT EGNDLY++M + GVIN Sbjct: 175 KTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYQEMKESGVIN 220
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CLOCE (ATP synthase subunit beta OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=atpD PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.754e-58 Identity = 92/164 (56.10%), Postives = 116/164 (70.73%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 GS G + QVIG V+D+RF+ G LP I A+++ S + EV QH+G VR +AM T+GLVRG + +TG ITVPVG+ LGRI NV+GEP+D+ G ++ YLPIHREAP+ EQ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 GSSGVIVQVIGPVLDIRFENGILPDIYNAIKIPADSGTVTAEVMQHLGNDTVRCVAMSSTDGLVRGMKAEDTGDAITVPVGKEVLGRIFNVLGEPVDKAGPVEPTAYLPIHREAPSLEEQRPSTEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 166 HSP 2 Score: 65.855 bits (159), Expect = 2.754e-58 Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLIMELI N+A HGG+S+F GVGERT EGNDL+ M GVI Sbjct: 158 KTVLIMELIRNIATEHGGYSIFTGVGERTREGNDLWHDMNDSGVI 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HYPNA (ATP synthase subunit beta OS=Hyphomonas neptunium (strain ATCC 15444) GN=atpD PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 4.533e-58 Identity = 112/166 (67.47%), Postives = 133/166 (80.12%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 G++ QVIGAVVDV FD LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V + G+PITVPVG TLGRIMNVIGEPIDE+G + + Y+PIH +APAFV+QATE ++LVTGIKV+DLL PY +GGKIGLFGGAGVGK L+ L+ + +L Sbjct: 9 GRISQVIGAVVDVEFDGELPSILNALETFNNGSRLVLEVAQHLGENTVRTIAMDSTEGLVRGQPVSDIGTPITVPVGPATLGRIMNVIGEPIDERGPVNADTYMPIHAQAPAFVDQATESEVLVTGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLIMELVNNIAKL 174 HSP 2 Score: 81.2629 bits (199), Expect = 1.381e-14 Identity = 64/142 (45.07%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMEL+NN+AK GG+SVFAGVGERT EGNDLY +M++ VINL +GE +M L + P A AR GL + FR+ EG K F F F TQ + LG P VGY G+L R Sbjct: 160 KTVLIMELVNNIAKLFGGYSVFAGVGERTREGNDLYHEMIESNVINL---EGESRM-SLVYGQMNEPPGARARVALT-GLTQAEYFRDVEG-KDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGALQER 292
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THELT (ATP synthase subunit beta OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=atpD PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.680e-58 Identity = 92/163 (56.44%), Postives = 120/163 (73.62%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVD--HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + ++IG VVDV+FDE LP I ALEV + + +L+LEV Q +G+ VR +A+D T+GL RG V++TG PI PVG+ LGRI+NV+G+PIDEKGD++ E Y PIHR AP EQ TE ++L TGIKV+DLLAP+ +GGKIG FGGAGVGK L+ L+ Sbjct: 5 GYIVRIIGPVVDVKFDEKELPDIYNALEVTNPQNGEKLILEVEQLIGDNTVRAVALDSTDGLTRGLEVVDTGKPIVAPVGKGVLGRILNVVGKPIDEKGDIQAEDYWPIHRPAPKITEQKTEIEVLETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 167 HSP 2 Score: 62.3882 bits (150), Expect = 4.680e-58 Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVL+MELI N+A GFSVFAGVGERT EGNDL+ +M + GV+ Sbjct: 159 KTVLVMELIRNIAIEQKGFSVFAGVGERTREGNDLWLEMQEAGVL 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THETN (ATP synthase subunit beta OS=Thermoanaerobacter tengcongensis GN=atpD PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 4.681e-58 Identity = 88/160 (55.00%), Postives = 116/160 (72.50%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + QVIG VVD+RF+ LPPI A+++ LV+EVAQH+G+ VR +AM T+GL RG ++TG PI VPVG+ LGR+ NV+G+PIDE G++K Y+PIH++ P+F EQ +IL TGIKV+DLL PY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GYITQVIGPVVDIRFEGDLPPINNAIKIPMGDRELVVEVAQHIGDNTVRCVAMASTDGLRRGMECIDTGGPIMVPVGKGVLGRMFNVLGQPIDELGEVKDVKYMPIHKKPPSFEEQNPATEILETGIKVIDLLTPYPKGGKIGLFGGAGVGKTVLIMELI 163 HSP 2 Score: 65.0846 bits (157), Expect = 4.681e-58 Identity = 31/46 (67.39%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLIMELI NVA HGG+S+FAGVGER+ EGN+L+ +M + GVI+ Sbjct: 155 KTVLIMELIRNVAIEHGGYSIFAGVGERSREGNELWLEMHEAGVID 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_VIBFM (ATP synthase subunit beta OS=Vibrio fischeri (strain MJ11) GN=atpD PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.102e-58 Identity = 91/161 (56.52%), Postives = 118/161 (73.29%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F +G +P + AL VVD RLVLEV Q +G GVVR I M ++GL RG V NTG+PI+VPVG TLGRIMNV+G+ IDE GD+ E + IHREAP++ EQ+ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQGEVPRVYDALNVVDAQERLVLEVQQQIGGGVVRCIVMGSSDGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGDIDAEEHYAIHREAPSYEEQSNSTELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 66.6254 bits (161), Expect = 6.102e-58 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNI 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_VIBF1 (ATP synthase subunit beta OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=atpD PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.102e-58 Identity = 91/161 (56.52%), Postives = 118/161 (73.29%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F +G +P + AL VVD RLVLEV Q +G GVVR I M ++GL RG V NTG+PI+VPVG TLGRIMNV+G+ IDE GD+ E + IHREAP++ EQ+ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQGEVPRVYDALNVVDAQERLVLEVQQQIGGGVVRCIVMGSSDGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGDIDAEEHYAIHREAPSYEEQSNSTELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 66.6254 bits (161), Expect = 6.102e-58 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNI 202 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |