DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACEWO (ATP synthase subunit beta, sodium ion specific OS=Acetobacterium woodii GN=atpD PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 6.102e-58 Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKG-DLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG+V QVIG VVDV+F + LP + A+ + + LV+EVAQ +G+ +VR IAMD T+GL+R Q ++TGS I VPVG+ TLGR+ NV+GEPID K D K PIHR P+F EQ T+ ++ TGIKVVDL+ PY RGGKIGLFGGAGVGK L+ L+ Sbjct: 4 NIGKVVQVIGPVVDVKFQKDKLPKLNNAVNIELNGHTLVIEVAQQLGDDIVRCIAMDSTDGLMRNQEAVDTGSAIQVPVGKATLGRMFNVLGEPIDGKPFDTKDVVMHPIHRHPPSFEEQQTQPEMFETGIKVVDLICPYVRGGKIGLFGGAGVGKTVLIQELI 167 HSP 2 Score: 75.8702 bits (185), Expect = 6.102e-58 Identity = 60/144 (41.67%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMC--PLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A HGG SVFAGVGERT EGNDLY +MM+ GVIN + +C +++ +ALA GL + + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 159 KTVLIQELINNIATQHGGLSVFAGVGERTREGNDLYYEMMESGVIN------KTALCFGQMNEPPGARMRIALA------GLTMAEYFRDDEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGALQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_UREPA (ATP synthase subunit beta OS=Ureaplasma parvum GN=atpD PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.102e-58 Identity = 95/161 (59.01%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q++G VVDVRF E LP I TALE+ +H +LVLEV+Q +G+ + R IAMD T+GLVRGQ V+NT PIT+PVG+ LGR+ NV G+PIDE+ T +PIHR AP+F EQA +IL TGIKVVDLL P+ +GGKIGLFGGAGVGK L+ L+ Sbjct: 7 GKINQILGPVVDVRFPSEWLPEINTALELNNHGSKLVLEVSQLVGDNIARCIAMDTTDGLVRGQEVINTQKPITMPVGKQVLGRMFNVTGDPIDEQ-PAPTGKRMPIHRPAPSFAEQAESIEILETGIKVVDLLVPFAKGGKIGLFGGAGVGKTVLMQELI 166 HSP 2 Score: 65.855 bits (159), Expect = 6.102e-58 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ ELI+N+AK HGG SVFAGVGERT EGNDLY +M + V++ Sbjct: 158 KTVLMQELIHNIAKNHGGLSVFAGVGERTREGNDLYYEMAESDVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_UREP2 (ATP synthase subunit beta OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=atpD PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.102e-58 Identity = 95/161 (59.01%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q++G VVDVRF E LP I TALE+ +H +LVLEV+Q +G+ + R IAMD T+GLVRGQ V+NT PIT+PVG+ LGR+ NV G+PIDE+ T +PIHR AP+F EQA +IL TGIKVVDLL P+ +GGKIGLFGGAGVGK L+ L+ Sbjct: 7 GKINQILGPVVDVRFPSEWLPEINTALELNNHGSKLVLEVSQLVGDNIARCIAMDTTDGLVRGQEVINTQKPITMPVGKQVLGRMFNVTGDPIDEQ-PAPTGKRMPIHRPAPSFAEQAESIEILETGIKVVDLLVPFAKGGKIGLFGGAGVGKTVLMQELI 166 HSP 2 Score: 65.855 bits (159), Expect = 6.102e-58 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ ELI+N+AK HGG SVFAGVGERT EGNDLY +M + V++ Sbjct: 158 KTVLMQELIHNIAKNHGGLSVFAGVGERTREGNDLYYEMAESDVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOS4 (ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpD1 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 7.733e-58 Identity = 115/168 (68.45%), Postives = 133/168 (79.17%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 S G+V QVIGAVVDV+FD GLPPIL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG RV +TGSPI+VPVG TLGRI+NVIGEPIDEKGDL IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 5 SQGKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGLVRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKV 172 HSP 2 Score: 79.7221 bits (195), Expect = 4.018e-14 Identity = 64/150 (42.67%), Postives = 78/150 (52.00%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI---NLGEQQ-----GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK H G+SVFAGVGERT EGNDLY +M++ GVI NL E + G+ P ++A+ VAL GL L + FR+ G F F F TQ + LG P VGY G+L R Sbjct: 158 KTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIESGVIKIDNLSESKVALVYGQMNEPPGARAR-----VALT------GLTLAEQFRDQSGTDVLF-FVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGALQER 292
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOS1 (ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpD1 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 7.733e-58 Identity = 115/168 (68.45%), Postives = 133/168 (79.17%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 S G+V QVIGAVVDV+FD GLPPIL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG RV +TGSPI+VPVG TLGRI+NVIGEPIDEKGDL IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 5 SQGKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGLVRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKV 172 HSP 2 Score: 79.7221 bits (195), Expect = 4.018e-14 Identity = 64/150 (42.67%), Postives = 78/150 (52.00%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI---NLGEQQ-----GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK H G+SVFAGVGERT EGNDLY +M++ GVI NL E + G+ P ++A+ VAL GL L + FR+ G F F F TQ + LG P VGY G+L R Sbjct: 158 KTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIESGVIKIDNLSESKVALVYGQMNEPPGARAR-----VALT------GLTLAEQFRDQSGTDVLF-FVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGALQER 292
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_AMOA5 (ATP synthase subunit beta OS=Amoebophilus asiaticus (strain 5a2) GN=atpD PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.950e-58 Identity = 90/165 (54.55%), Postives = 115/165 (69.70%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVD-HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG + Q+IG ++DV F+ LP IL ALEV ++VLE QH+G+ VRTIAM TEGLVRG +V++TG+ I +PVG GR+ NVIGE ID KT+ LPIHR AP F + +T ++L TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 NIGAITQIIGPIIDVSFENSGKLPAILNALEVTKADGQKIVLECQQHLGQYAVRTIAMHETEGLVRGMKVVDTGAAIQMPVGEAIRGRLFNVIGEAIDGLPQPKTQQKLPIHRPAPKFKDISTATEVLYTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELI 167 HSP 2 Score: 75.8702 bits (185), Expect = 7.950e-58 Identity = 36/50 (72.00%), Postives = 44/50 (88.00%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQ 889 KTVLIMELI+N+AK++ G SVFAGVGERT EGNDL R+M++ GVIN GE+ Sbjct: 159 KTVLIMELIDNIAKSYAGLSVFAGVGERTREGNDLLREMIESGVINYGEE 208
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CYAP8 (ATP synthase subunit beta OS=Cyanothece sp. (strain PCC 8801) GN=atpD PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 7.953e-58 Identity = 88/172 (51.16%), Postives = 121/172 (70.35%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T + ++G++ QVIG VVD F G LP I AL++ + V + EV Q +G+ VR +AM GT+GLVRG +++TG+PI+VPVG+VTLGRI NV+GEP+DEKGD+ PIHR AP ++ T+ ++ TGIKV+DLL PY++GGKIGLFGGAGVGK ++ L+ Sbjct: 5 TEQTNVGKITQVIGPVVDAEFPSGKLPRIYNALKIQGKNPAGNDVSVTCEVQQLLGDNQVRAVAMSGTDGLVRGMDIVDTGAPISVPVGKVTLGRIFNVLGEPVDEKGDVDMSLTSPIHRPAPKLIDLETKPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELI 176 HSP 2 Score: 70.4774 bits (171), Expect = 7.953e-58 Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTV++MELINN+A HGG SVFAGVGERT EGNDLY +M++ VIN E+ L + P A R G GL + + FR+ Sbjct: 168 KTVIMMELINNIAINHGGVSVFAGVGERTREGNDLYNEMIESKVIN--PDNPEESKIALVYGQMNEPPGARMRVGLS-GLTMAEYFRD 252
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACST (ATP synthase subunit beta OS=Bacillus stearothermophilus GN=atpD PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.954e-58 Identity = 98/170 (57.65%), Postives = 122/170 (71.76%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR--------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDV+F+ G LP I AL++ H R L LEVA H+G+ VRTIAM T+GL+RG V++TG+PI+ PVG VTLGR+ NV+GEPID +GD+ + PIHR AP F E ATE +IL TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVIQVMGPVVDVKFETGHLPAIYNALKI-QHQARNENEVDIDLTLEVALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISRPVGEVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 67.781 bits (164), Expect = 7.954e-58 Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN-LGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLI ELI+N+A+ HGG SVFAG GERT EGNDLY +M GVI+ G G+ P + + VAL GL + + FR+ +G Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGFGERTREGNDLYHEMKDSGVISKTGMVFGQMNEPPGPRMR-----VALT------GLTMAEYFRDEQG 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_NITSB (ATP synthase subunit beta OS=Nitratiruptor sp. (strain SB155-2) GN=atpD PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.955e-58 Identity = 97/165 (58.79%), Postives = 118/165 (71.52%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALE----VVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG++ QV+G VVDV F++ LP I ALE V D +RLVLEVA H+G+ VRTIAMD T+GLVRG V TG I VPVG LGRI NVIG+ IDE L+ + Y IHR AP F EQ+T+++I TGIKVVDLLAPY++GGK GLFGGAGVGK ++ L+ Sbjct: 5 IGKIIQVMGPVVDVDFEDYLPAINEALEMELEVEDKKIRLVLEVAAHLGDNRVRTIAMDMTDGLVRGMEVKATGDSIKVPVGEEVLGRIFNVIGDTIDEGEPLQAKTYWSIHRSAPPFEEQSTKEEIFETGIKVVDLLAPYKKGGKTGLFGGAGVGKTVIIMELI 169 HSP 2 Score: 65.4698 bits (158), Expect = 7.955e-58 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + V++ Sbjct: 161 KTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYYEMKESNVLD 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_VIBCM (ATP synthase subunit beta OS=Vibrio cholerae serotype O1 (strain M66-2) GN=atpD PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.955e-58 Identity = 88/161 (54.66%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F + +P + AL VVD RLVLEV Q +G GV+R I M ++GL RG V NTG+PI+VPVG TLGRIMNV+G+ IDE+GD+ E IHR AP++ EQ++ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 67.781 bits (164), Expect = 7.955e-58 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ 892 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ + + Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPE 206 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |