DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_NEUCR (ATP synthase subunit beta, mitochondrial OS=Neurospora crassa GN=atp-2 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 7.237e-56 Identity = 109/166 (65.66%), Postives = 134/166 (80.72%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 G++ QVIGAVVDV+FD + LPPIL ALE ++ +LVLEV+QH+GE VVR IAMDGTEGLVRG + +TG+PIT+PVG TLGRI+NV G+PIDE+G +KT+ + PIH EAP FVEQ+T +ILVTGIKVVDLLAPY RGGKIGLFGGAGVGK + L+ + + Sbjct: 49 GKIYQVIGAVVDVKFDTDKLPPILNALETQNNGQKLVLEVSQHLGENVVRCIAMDGTEGLVRGAKASDTGAPITIPVGPATLGRIINVTGDPIDERGPIKTDKFRPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAK 214 HSP 2 Score: 75.0998 bits (183), Expect = 9.896e-13 Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL-GEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTV I ELINN+AKAHGG+SVF GVGERT EGNDLY +M + VI L G+ + +++ VAL GL + + FR+ EG Sbjct: 201 KTVFIQELINNIAKAHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALT------GLTIAEYFRDEEG 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSECV (ATP synthase subunit beta, chloroplastic OS=Pseudogaltonia clavata GN=atpB PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 9.413e-56 Identity = 88/168 (52.38%), Postives = 113/168 (67.26%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G++ Q+IG V+DV F G +P I AL V V + + EV Q +G VR +AM T+GL RG V++T +P++VPVG TLGRI NV+GEP+D G + T PIHR APAF++ TE I TGIKVVDLLAPY+RGGKIGLFGGAGVGK L+ L+ Sbjct: 19 NVGRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTELSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 186 HSP 2 Score: 71.2478 bits (173), Expect = 9.413e-56 Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLIMELI N+AKAHGG SVF GVG RT EGNDLY +M + GVIN Sbjct: 178 KTVLIMELIYNIAKAHGGVSVFGGVGVRTREGNDLYMEMKESGVIN 223
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CYAP7 (ATP synthase subunit beta OS=Cyanothece sp. (strain PCC 7424) GN=atpD PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.227e-55 Identity = 86/172 (50.00%), Postives = 115/172 (66.86%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T + ++G++ QVIG VVD F G LP I AL V V + EV Q +G+ VR +AM T+GLVRG +++TG+PI+VPVG+ TLGRI NV+GEP+DEKG + PIHR AP + T+ ++ TGIKV+DLL PY++GGKIGLFGGAGVGK ++ L+ Sbjct: 4 TTEQTVGKITQVIGPVVDAEFPSGKLPRIYNALTVKGTNPAGAEVNITCEVQQLLGDNQVRAVAMSSTDGLVRGMEIIDTGAPISVPVGKSTLGRIFNVLGEPVDEKGSVNVNETFPIHRPAPKLTDLETKPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELI 175 HSP 2 Score: 68.1662 bits (165), Expect = 1.227e-55 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV++MELINN+A HGG SVF GVGERT EGNDLY +M++ VIN Sbjct: 167 KTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESKVIN 212
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSYWF (ATP synthase subunit beta OS=Psychrobacter sp. (strain PRwf-1) GN=atpD PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.228e-55 Identity = 92/163 (56.44%), Postives = 117/163 (71.78%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F+ +P + AL VVD LEV Q +G+GVVRTIAM TEGL RG V NTG+PITVPVG TLGRIM+V+G PIDE+G + +E IHR+AP++ EQA +L TGIKV+DLL P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFNRTDVPQVYDAL-VVD-GTDTTLEVQQQLGDGVVRTIAMGSTEGLKRGLPVTNTGAPITVPVGEATLGRIMDVLGRPIDEQGPVNSEDKWSIHRQAPSYDEQANSTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 65.4698 bits (158), Expect = 1.228e-55 Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+++ Sbjct: 154 KTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEAGVVDV 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACPF (ATP synthase subunit beta OS=Bacillus pseudofirmus GN=atpD PE=3 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.228e-55 Identity = 96/172 (55.81%), Postives = 117/172 (68.02%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID----EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + QV+G VVDV+F G LP I AL+VV V + LEVA H+G+ VRT+AM T+GLVRG L+TG+PI+VPVG TLGR+ NV+GE ID D+K + PIHREAP F E +T +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GHITQVMGPVVDVKFKSGQLPEINNALKVVQVGADKNAVDVTVTLEVALHLGDDSVRTVAMGSTDGLVRGTEALDTGAPISVPVGEATLGRVFNVLGEAIDLGEPVAADVKRD---PIHREAPKFEELSTTTEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 71.2478 bits (173), Expect = 1.228e-55 Identity = 58/143 (40.56%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI G+ P ++ + VAL+ GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 164 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKTAMVFGQMNEPPGARMR-----VALS------GLTMAEHFRDRDG-QDVLLFVDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 291
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACCQ (ATP synthase subunit beta OS=Bacillus cereus (strain Q1) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.228e-55 Identity = 92/166 (55.42%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q++G VVDV+FD G LP I AL V + + L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ NV+G+ ID G++ + PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGELNLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 71.633 bits (174), Expect = 1.228e-55 Identity = 58/142 (40.85%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Q P A++R L GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEP-PGARQRVALT---------GLTMAEYFRDEQG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACC7 (ATP synthase subunit beta OS=Bacillus cereus (strain AH187) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.228e-55 Identity = 92/166 (55.42%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q++G VVDV+FD G LP I AL V + + L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ NV+G+ ID G++ + PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGELNLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 71.633 bits (174), Expect = 1.228e-55 Identity = 58/142 (40.85%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Q P A++R L GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEP-PGARQRVALT---------GLTMAEYFRDEQG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACC1 (ATP synthase subunit beta OS=Bacillus cereus (strain ATCC 10987) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.228e-55 Identity = 92/166 (55.42%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q++G VVDV+FD G LP I AL V + + L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ NV+G+ ID G++ + PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGELNLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 71.633 bits (174), Expect = 1.228e-55 Identity = 58/142 (40.85%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Q P A++R L GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEP-PGARQRVALT---------GLTMAEYFRDEQG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MACCJ (ATP synthase subunit beta OS=Macrococcus caseolyticus (strain JCSC5402) GN=atpD PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.600e-55 Identity = 91/169 (53.85%), Postives = 119/169 (70.41%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVD------HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLK-TEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G V QV+G V+DVRF+ G P L +D ++ +L LEVA H+G+ VRTIAM T+G+ RG +V +TG+PI+VPVG TLGR+ NV+GE ID + +L T PIHR+AP F E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 AVGHVIQVMGPVIDVRFEHGQLPALNNALTLDIERGEGNTTKLTLEVALHLGDDAVRTIAMSSTDGVQRGAQVTDTGAPISVPVGDATLGRVFNVLGEKIDLEPELDGTVRRDPIHRQAPKFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 170 HSP 2 Score: 69.3218 bits (168), Expect = 1.600e-55 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDL+ +M GVI Sbjct: 162 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFHEMSDSGVI 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PEPNI (ATP synthase subunit beta (Fragment) OS=Peptococcus niger GN=atpD PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.602e-55 Identity = 92/171 (53.80%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGL-PPILTALEV----------VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + +V+G VVDV F GL P I AL + H ++VLEVA+H+G +VR IAM T+GL+RG V + SPITVPVG TLGR+MNV+G+PIDE G++ +E PIHR AP +V+Q ++IL TGIKVVDLL PY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GTIIKVVGPVVDVEFPSGLLPNINNALHISSDEQPEDKKTGHDFKVVLEVAEHLGGNIVRAIAMSSTDGLMRGMVVTDQESPITVPVGDATLGRLMNVVGDPIDEAGEVPSETRWPIHRSAPTYVQQNPSKEILETGIKVVDLLCPYVKGGKIGLFGGAGVGKTVLIQELI 174 HSP 2 Score: 63.1586 bits (152), Expect = 1.602e-55 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELI N+A HGG+SVFAGVGERT EG DL +M + GVI+ Sbjct: 166 KTVLIQELIRNIAYEHGGYSVFAGVGERTREGKDLLVEMRESGVID 211 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |