DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPA (ATP synthase subunit beta OS=Rhodopseudomonas palustris GN=atpD PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.612e-55 Identity = 111/171 (64.91%), Postives = 134/171 (78.36%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 T G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI+VPVG TLGRIMNVIGEP+DE+G +K+E IH+EAPA+ +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ + R Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGAPISVPVGAGTLGRIMNVIGEPVDEQGPIKSEGLRAIHQEAPAYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAR 173 HSP 2 Score: 80.8777 bits (198), Expect = 1.803e-14 Identity = 48/88 (54.55%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINNVA+AHGG+SVFAGVGERT EGNDLY + ++ GV G GE C L + P A AR G GL + + FR+ Sbjct: 160 KTVLIQELINNVARAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKCALVYGQMNEPPGARARVGLT-GLTVAEHFRD 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACHD (ATP synthase subunit beta OS=Bacillus halodurans GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.086e-55 Identity = 94/169 (55.62%), Postives = 115/169 (68.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + QV+G VVDVRF G LP + AL V V + LEVA H+G+ VRTIAM T+GLVRG V++TG+ I+VPVG VTLGR+ NV+GE ID + + PIHREAP F E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GHITQVMGPVVDVRFQSGQLPELNNALRVEQKGADQNAVDVNVTLEVALHLGDDTVRTIAMGSTDGLVRGTEVVDTGAAISVPVGEVTLGRVFNVLGESIDLDEPIPADAERSPIHREAPKFEELSTKTEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 70.8626 bits (172), Expect = 2.086e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 164 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVI 208
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ERWT9 (ATP synthase subunit beta OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=atpD PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.087e-55 Identity = 89/161 (55.28%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + +ALEV + RLVLEV Q +G GVVRTIAM ++GL RG ++ PI VPVG TLGRIMNV+GEPID KGD+ E IHR AP++ +Q+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLETVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 62.3882 bits (150), Expect = 2.087e-55 Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H GFSVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACLD (ATP synthase subunit beta OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=atpD PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.720e-55 Identity = 93/169 (55.03%), Postives = 117/169 (69.23%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYL-PIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDVRF++G LP I A++V + + L LEVA H+G+ VRTIAM T+G+ RG ++ G PI+VPVG VTLGR+ NV+GE ID L + PIHREAP F + +TE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVSQVLGPVVDVRFEDGHLPEIYNAIKVTHKAQNENEVDIDLTLEVALHLGDDSVRTIAMASTDGVTRGMEAIDLGEPISVPVGNVTLGRVFNVLGENIDLDEPLPADAAKDPIHREAPKFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 70.8626 bits (172), Expect = 2.720e-55 Identity = 45/92 (48.91%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI G+ P ++ + VAL GL + + FR+ EG Sbjct: 164 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVIGKTAMVFGQMNEPPGARMR-----VALT------GLTMAEHFRDKEG 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACSK (ATP synthase subunit beta OS=Bacillus clausii (strain KSM-K16) GN=atpD PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.720e-55 Identity = 93/171 (54.39%), Postives = 115/171 (67.25%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+ G VVDV+F G LP I AL V V++ LEVA H+G VRT+AM T+GL+RG VL+TG PI+VPVG TLGR+ NV+GE ID ++ + PIHREAP+F E T +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 STGRIIQITGPVVDVKFPSGQLPEINNALTVNQQGAADGAVDVKVTLEVALHLGNDTVRTVAMGSTDGLMRGTEVLDTGGPISVPVGEATLGRVFNVLGEEIDLQEPVAEGTRRDPIHREAPSFEELTTTTEILETGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 71.2478 bits (173), Expect = 2.720e-55 Identity = 60/143 (41.96%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINNVA HGG SVFAGVGERT EGNDLY +M GVI G+ P ++ + VAL GL + + FR+ +GA F F F TQ + LG P VGY G L R Sbjct: 164 KTVLIQELINNVALEHGGISVFAGVGERTREGNDLYHEMKDAGVITKTAMVFGQMNEPPGARMR-----VALT------GLTMAEYFRDEQGAD-VLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 291
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRSY (ATP synthase subunit beta OS=Streptococcus suis (strain 05ZYH33) GN=atpD PE=3 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 2.720e-55 Identity = 92/168 (54.76%), Postives = 120/168 (71.43%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F ++ LP I AL V D ++VLEVA +G+GVVRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID + + PIH++APAF E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKITQVVGPVVDVAFAAEDKLPEINNALVVYKNDDSKQKVVLEVALELGDGVVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEESFPADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 2.720e-55 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRS2 (ATP synthase subunit beta OS=Streptococcus suis (strain 98HAH33) GN=atpD PE=3 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 2.720e-55 Identity = 92/168 (54.76%), Postives = 120/168 (71.43%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F ++ LP I AL V D ++VLEVA +G+GVVRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID + + PIH++APAF E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKITQVVGPVVDVAFAAEDKLPEINNALVVYKNDDSKQKVVLEVALELGDGVVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEESFPADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 2.720e-55 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRR6 (ATP synthase subunit beta OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=atpD PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.720e-55 Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F G LP I AL V + ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID E + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVIGPVVDVLFAAGEKLPEINNALVVYKNDERKTKIVLEVALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 2.720e-55 Identity = 58/143 (40.56%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRPN (ATP synthase subunit beta OS=Streptococcus pneumoniae GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.720e-55 Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F G LP I AL V + ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID E + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVIGPVVDVLFAAGEKLPEINNALVVYKNDERKTKIVLEVALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 2.720e-55 Identity = 58/143 (40.56%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRPJ (ATP synthase subunit beta OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.720e-55 Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F G LP I AL V + ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID E + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVIGPVVDVLFAAGEKLPEINNALVVYKNDERKTKIVLEVALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 2.720e-55 Identity = 58/143 (40.56%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |