DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRPI (ATP synthase subunit beta OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.720e-55 Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F G LP I AL V + ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID E + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVIGPVVDVLFAAGEKLPEINNALVVYKNDERKTKIVLEVALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 2.720e-55 Identity = 58/143 (40.56%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRP2 (ATP synthase subunit beta OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.720e-55 Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F G LP I AL V + ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID E + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVIGPVVDVLFAAGEKLPEINNALVVYKNDERKTKIVLEVALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 2.720e-55 Identity = 58/143 (40.56%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PARL1 (ATP synthase subunit beta OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 2.750e-55 Identity = 111/167 (66.47%), Postives = 131/167 (78.44%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 ++G++ QVIGAVVDV F + LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGL RGQ V +TG+ ITVPVG TLGRI+NVIGEP+DE G +K E IH+EAP+FVEQ+TE Q+LVTGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ + + Sbjct: 4 AVGKIAQVIGAVVDVTFTDNLPAILNALETTNGGNRLVLEVAQHLGENTVRTIAMDTTEGLTRGQEVRDTGNAITVPVGEGTLGRIINVIGEPVDEAGPVKHEARREIHQEAPSFVEQSTEAQMLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAK 170 HSP 2 Score: 77.0258 bits (188), Expect = 2.604e-13 Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGV-----INLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINN+AKAHGG+SVFAGVGERT EGNDLY +M++ GV N G+ G + C L + P A AR GL + + FR+ Sbjct: 157 KTVLIQELINNIAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKDPNENNGDTTGSK--CALVFGQMNEPPGARARVALT-GLTVAEHFRD 246
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SYNY3 (ATP synthase subunit beta OS=Synechocystis sp. (strain PCC 6803) GN=atpD PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.545e-55 Identity = 86/168 (51.19%), Postives = 115/168 (68.45%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G++ QVIG V+D +F G LP I AL+V + V + EV Q +G+ VR +AM T+GLVRG V++TG+PI+VPVG TLGRI NV+GEP+D KG + PIHR AP V+ T+ Q+ TGIKV+DLL PY++GGKIGLFGGAGVGK ++ L+ Sbjct: 9 NVGKITQVIGPVIDAQFPSGKLPRIYNALKVQGRNSAGNEVAVTCEVQQLLGDNQVRAVAMSSTDGLVRGMDVVDTGAPISVPVGTGTLGRIFNVLGEPVDNKGPVPAGETFPIHRPAPKLVDLETKPQVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELI 176 HSP 2 Score: 68.9366 bits (167), Expect = 3.545e-55 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV++MELINN+A HGG SVF GVGERT EGNDLY +M++ VIN Sbjct: 168 KTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESNVIN 213
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACSU (ATP synthase subunit beta OS=Bacillus subtilis GN=atpD PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.546e-55 Identity = 93/172 (54.07%), Postives = 121/172 (70.35%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEK----GDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDVRF++G LP I A+++ + + L LEVA H+G+ VRTIAM T+G+ RG ++TG+PI+VPVG VTLGR+ NV+GE ID D K + PIHR+AP+F + +TE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVSQVLGPVVDVRFEDGHLPEIYNAIKISQPAASENEVGIDLTLEVALHLGDDTVRTIAMASTDGVQRGMEAVDTGAPISVPVGDVTLGRVFNVLGENIDLNEPVPADAKKD---PIHRQAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 70.8626 bits (172), Expect = 3.546e-55 Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDL+ +M GVIN Sbjct: 164 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVIN 209
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SACD2 (ATP synthase subunit beta OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=atpD PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 3.546e-55 Identity = 87/163 (53.37%), Postives = 114/163 (69.94%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P + AL V D L LEV Q +G+GVVR IAM G+EG+ RG V NTG+PI VPVG TLGRIM+V+G PIDEKG + IHR+AP + E A +++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDSVPKVYDALTVADKG--LTLEVQQQLGDGVVRAIAMGGSEGVSRGLAVENTGAPINVPVGTATLGRIMDVLGNPIDEKGPINETERASIHRKAPKYDELAASEELLATGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 66.6254 bits (161), Expect = 3.546e-55 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 154 KTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYFEMQEAGVVNV 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_NOVAD (ATP synthase subunit beta OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=atpD PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 3.592e-55 Identity = 111/167 (66.47%), Postives = 130/167 (77.84%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 S G++ QVIGAVVDV FD LP IL+ALE ++ RLVLEVAQH+GE VRTIAMD T+GL RGQ V NTG+ I+VPVG TLGRIMNVIGEPIDE+G + E PIH +AP F+EQ+TE ILVTGIKV+DLLAPY RGGKIGLFGGAGVGK L+ L+ + + Sbjct: 7 STGKISQVIGAVVDVTFDGELPAILSALETDNNGNRLVLEVAQHLGENTVRTIAMDSTDGLTRGQPVTNTGAQISVPVGPKTLGRIMNVIGEPIDERGPVGAEQTAPIHAKAPEFIEQSTEAAILVTGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAK 173 HSP 2 Score: 73.1738 bits (178), Expect = 3.760e-12 Identity = 46/94 (48.94%), Postives = 54/94 (57.45%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL---GEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLI ELINN+AK HGG SVFAGVGERT EGNDLY + + GVI G + L + P A AR GL + + FR+ EG Sbjct: 160 KTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKDADGNPTPDGSKVALVFGQMNEPPGARARVALS-GLTMAEYFRDQEG 252
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAAW (ATP synthase subunit beta OS=Staphylococcus aureus (strain MW2) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAAT (ATP synthase subunit beta OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAAS (ATP synthase subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |