DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAAR (ATP synthase subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAAN (ATP synthase subunit beta OS=Staphylococcus aureus (strain N315) GN=atpD PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAAM (ATP synthase subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=atpD PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAAE (ATP synthase subunit beta OS=Staphylococcus aureus (strain Newman) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAAC (ATP synthase subunit beta OS=Staphylococcus aureus (strain COL) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAAB (ATP synthase subunit beta OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAA9 (ATP synthase subunit beta OS=Staphylococcus aureus (strain JH9) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAA8 (ATP synthase subunit beta OS=Staphylococcus aureus (strain NCTC 8325) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAA3 (ATP synthase subunit beta OS=Staphylococcus aureus (strain USA300) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAA2 (ATP synthase subunit beta OS=Staphylococcus aureus (strain JH1) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |