DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAA1 (ATP synthase subunit beta OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.623e-55 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V QV+G V+DVRF+ P + V+D +++L LEVA +G+ VVRTIAMD T+G+ RG V +TG I+VPVG TLGR+ NV+GE ID K ++ PIHR+APAF E +TE QIL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.707 bits (169), Expect = 4.623e-55 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRTD (ATP synthase subunit beta OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=atpD PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.623e-55 Identity = 94/168 (55.95%), Postives = 119/168 (70.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F G LP I AL V + S R+VLEVA +GEGVVRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID + + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVVGPVVDVAFATGDKLPEINNALVVYTDEEKSRRIVLEVALELGEGVVRTIAMESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDMEAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 66.6254 bits (161), Expect = 4.623e-55 Identity = 56/143 (39.16%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGER+ EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERSREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRT2 (ATP synthase subunit beta OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=atpD PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.623e-55 Identity = 94/168 (55.95%), Postives = 119/168 (70.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F G LP I AL V + S R+VLEVA +GEGVVRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID + + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVVGPVVDVAFATGDKLPEINNALVVYTDEEKSRRIVLEVALELGEGVVRTIAMESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDMEAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 66.6254 bits (161), Expect = 4.623e-55 Identity = 56/143 (39.16%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGER+ EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERSREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRT1 (ATP synthase subunit beta OS=Streptococcus thermophilus (strain CNRZ 1066) GN=atpD PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.623e-55 Identity = 94/168 (55.95%), Postives = 119/168 (70.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F G LP I AL V + S R+VLEVA +GEGVVRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID + + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVVGPVVDVAFATGDKLPEINNALVVYTDEEKSRRIVLEVALELGEGVVRTIAMESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDMEAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 66.6254 bits (161), Expect = 4.623e-55 Identity = 56/143 (39.16%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGER+ EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERSREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACA2 (ATP synthase subunit beta OS=Bacillus amyloliquefaciens (strain FZB42) GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 6.026e-55 Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYL-PIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDVRF++G LP I A++V + + L LEVA H+G+ VRTIAM T+G+ RG ++TG+PI+VPVG VTLGR+ NV+G+ ID L + PIHR AP+F E +TE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVSQVLGPVVDVRFEDGHLPAIYNAIKVSQPATGENEVGIDLTLEVALHLGDDTVRTIAMASTDGIQRGMEAVDTGAPISVPVGDVTLGRVFNVLGDKIDLNEPLPADAQKDPIHRSAPSFDELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 68.5514 bits (166), Expect = 6.026e-55 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDL+ +M GVI Sbjct: 164 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THEAB (ATP synthase subunit beta OS=Thermosipho africanus (strain TCF52B) GN=atpD PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 6.026e-55 Identity = 95/168 (56.55%), Postives = 121/168 (72.02%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGD-LKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K S G++ +VIG VVDV+F+EG LP I AL V++ +LVLEV Q +G+ VRT+A+D T+GL+RG V NTG PI VPVG+ LGR+ NVIGEPID K D +K Y PIH+ P+ EQ+T +IL TGIKV+DLLAP+ +GGKIG FGGAGVGK L+ L+ Sbjct: 3 KKSKGKILRVIGPVVDVQFEEGDLPDIYDALVVINPQTGKKLVLEVEQLIGDNAVRTVALDTTDGLMRGLEVENTGEPIKVPVGKGALGRMFNVIGEPIDGKEDEIKDVEYWPIHKAPPSITEQSTSVEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 170 HSP 2 Score: 61.2326 bits (147), Expect = 6.026e-55 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+MELI N+A H GFS+FAGVGERT EGN+LY M + V++ Sbjct: 162 KTVLVMELIRNIAIEHHGFSMFAGVGERTREGNELYLDMQEAEVLD 207
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACCA (ATP synthase subunit beta OS=Lactobacillus casei GN=atpD PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.026e-55 Identity = 92/166 (55.42%), Postives = 116/166 (69.88%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVV-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYL-PIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F ++ LP I AL + +LVLEVA +G+GV+RTIAMD T+GL RG V +TG PI+VPVG+ TLGR+ NV+G+PID+ L H IHR+AP F + T +IL TGIKV+DLL PY RGGK+GLFGGAGVGK L+ L+ Sbjct: 4 STGKIAQVIGPVVDVAFPINDNLPEINNALTITRKDGSQLVLEVALELGDGVMRTIAMDSTDGLQRGMAVEDTGGPISVPVGKDTLGRVFNVLGDPIDDGEALDLNHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.9366 bits (167), Expect = 6.026e-55 Identity = 57/143 (39.86%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GV+ N G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVMENTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SPHWW (ATP synthase subunit beta OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpD PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 6.127e-55 Identity = 108/167 (64.67%), Postives = 129/167 (77.25%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 ++G++ QVIGAVVDV FD LP IL ALE ++ RLVLEVAQH+GEG VRTIAMD T+GL RGQ V +TGS I VPVG TLGRI+NVIGEPIDE+G + PIH EAP FV+Q+T+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + + Sbjct: 9 NVGRISQVIGAVVDVSFDGSLPAILNALETTNNGNRLVLEVAQHLGEGTVRTIAMDATDGLTRGQEVTDTGSQIRVPVGPQTLGRILNVIGEPIDERGPVNATQTSPIHAEAPLFVDQSTDASILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAK 175 HSP 2 Score: 74.7146 bits (182), Expect = 1.292e-12 Identity = 61/145 (42.07%), Postives = 71/145 (48.97%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL---GEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+AK HGG SVFAGVGERT EGNDLY + + GVI G E L + P A AR GL + + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 162 KTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYHEFLDAGVIAKDADGNPTPEGSKVALVFGQMNEPPGARARVALS-GLTIAEYFRDVEG-QDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLSTDMGALQER 301
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHOS5 (ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpD PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 6.127e-55 Identity = 110/168 (65.48%), Postives = 130/168 (77.38%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 S G+V QVIGAVVDV+FD GLP IL ALE V++ RLVLEVAQH+GE VRTIAMD TEGLVRG V + G PI+VPVG TLGRI+NVIGEPIDEKG + + IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 5 SQGKVTQVIGAVVDVQFDGGLPAILNALETVNNDKRLVLEVAQHLGENTVRTIAMDATEGLVRGAPVTDLGGPISVPVGDATLGRILNVIGEPIDEKGPVSGDSTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKV 172 HSP 2 Score: 78.9518 bits (193), Expect = 6.853e-14 Identity = 64/150 (42.67%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI---NLGEQQ-----GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK H G+SVFAGVGERT EGNDLY +M+ GVI NL E + G+ P ++A+ VAL GL L + FR+ G F F F TQ + LG P VGY G+L R Sbjct: 158 KTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIDSGVIKIDNLSESKVALVYGQMNEPPGARAR-----VALT------GLTLAEQFRDQSGTDVLF-FVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGALQER 292
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACME (ATP synthase subunit beta OS=Bacillus megaterium GN=atpD PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 7.856e-55 Identity = 91/169 (53.85%), Postives = 117/169 (69.23%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-------DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKT-EHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q++G VVDV+FD G LP I AL++ + ++ L LEVA H+G+ VRT+AM T+GLVRG V +TG+ I+VPVG VTLGR+ NV+GE ID + PIHR+AP F +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVTQIMGPVVDVKFDNGHLPAIYNALKISHKPSSASEVAIELTLEVAIHLGDNTVRTVAMSSTDGLVRGLEVEDTGAAISVPVGDVTLGRVFNVLGEKIDLDAPIDAGARRDPIHRQAPKFENLSTQAEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 71.2478 bits (173), Expect = 7.856e-55 Identity = 44/91 (48.35%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Q P A++R L GL + + FR+ +G Sbjct: 164 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKTAMVFGQMNEP-PGARQRVALT---------GLTMAEYFRDEQG 244 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |