DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRSV (ATP synthase subunit beta OS=Streptococcus sanguinis (strain SK36) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.335e-54 Identity = 92/168 (54.76%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F G LP I AL V + ++VLEVA +G+GVVRTIAM+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVIGPVVDVAFAAGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIAMESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFPADAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 1.335e-54 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRMU (ATP synthase subunit beta OS=Streptococcus mutans GN=atpD PE=3 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 1.335e-54 Identity = 91/168 (54.17%), Postives = 120/168 (71.43%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F D+ LP I AL V D S R+VLEVA +G+G+VRTIAM+ T+GL RG V +TG I+VPVG+ TLGR+ NV+G+ ID +K + PIH++AP+F + +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 STGKIAQVVGPVVDVAFATDDKLPEINNALVVYKDGDKSQRIVLEVALELGDGLVRTIAMESTDGLTRGLEVFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFAEDAERQPIHKKAPSFDDLSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 1.335e-54 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRZT (ATP synthase subunit beta OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=atpD PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.741e-54 Identity = 91/168 (54.17%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F G LP I AL V + ++VLEVA +G+G+VRTI+M+ T+GL RG VL+TG PI+VPVG+ TLGR+ NV+G+ ID E + PIH++AP F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVIGPVVDVLFAAGEKLPEINNALVVYKNDERKTKIVLEVALELGDGMVRTISMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 1.741e-54 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ERWCT (ATP synthase subunit beta OS=Erwinia carotovora subsp. atroseptica GN=atpD PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.741e-54 Identity = 88/161 (54.66%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G G+VR IAM ++GL RG V N G PI VPVG+ TLGRIMNV+G+PID KGD+ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLGHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 1.741e-54 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ROSDO (ATP synthase subunit beta OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpD PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.783e-54 Identity = 105/168 (62.50%), Postives = 131/168 (77.98%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 ++G++ QVIGAVVDV+F + LP IL ALE ++ RLVLEVAQH+GE VR IAMD TEGLVRGQ V +T PI++PVG TLGRIMNV+GEPIDEKG + T+ IH+EAPAF EQ+T ++L TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 4 AVGKITQVIGAVVDVQFADHLPEILNALETNNNGNRLVLEVAQHLGENTVRAIAMDATEGLVRGQTVTDTDGPISIPVGNATLGRIMNVVGEPIDEKGPVATDETRSIHQEAPAFAEQSTSSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKV 171 HSP 2 Score: 76.2554 bits (186), Expect = 4.442e-13 Identity = 47/94 (50.00%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI---NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINN+AK H GFSVFAGVGERT EGNDLY +M++ VI NL E + +++ VAL GL L + FR+ G Sbjct: 157 KTVLIMELINNIAKVHSGFSVFAGVGERTREGNDLYHEMIESSVIVPDNLTESKVALVYGQMNEPPGARMRVALT------GLTLAEQFRDQSG 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB1_MYCPU (ATP synthase subunit beta 1 OS=Mycoplasma pulmonis GN=atpD1 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.269e-54 Identity = 81/163 (49.69%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G++ Q++G VVD+ F + +P I LE+V + + EVAQH+G+ VVRTI+M T GL RG V++TG+PI VPVG+ L R+ NV+G+ ID KG+++ + + IH AP++ EQ +IL TGIKV+DLL PY +GGKIGLFGGAGVGK L+ L+ Sbjct: 5 NVGKIVQILGPVVDISFAGQKIPAIYNNLELVFENNKYNFEVAQHIGDEVVRTISMVSTNGLSRGLEVIDTGAPIMVPVGKEVLSRMFNVLGQTIDNKGEIEAKEFRSIHASAPSYEEQNDSSEILETGIKVIDLLVPYSKGGKIGLFGGAGVGKTVLVQELI 167 HSP 2 Score: 70.0922 bits (170), Expect = 2.269e-54 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ ELINN+A HGG SVFAGVGERT EGNDLY +M+ GV++ Sbjct: 159 KTVLVQELINNIATQHGGLSVFAGVGERTREGNDLYHEMIASGVLD 204
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THIFE (ATP synthase subunit beta OS=Thiobacillus ferrooxidans GN=atpD PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.269e-54 Identity = 87/164 (53.05%), Postives = 113/164 (68.90%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 + ++G + QVIG V+DV F G P + VVD + L +EV +G+GV R IAM +EGL RG V TG+PI+VPVG TLGRIMNV+GEP+D KG ++TE IHR APAF E A ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK L+ L+ Sbjct: 7 ENAVGHIVQVIGPVIDVAFSRGQVPEIMEAIVVDAN-NLTIEVQAQLGDGVARGIAMGPSEGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELI 169 HSP 2 Score: 63.929 bits (154), Expect = 2.269e-54 Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+MELI N+A H G+SVFAGVGERT EGND Y +M GV++ Sbjct: 161 KTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLD 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HELHP (ATP synthase subunit beta OS=Helicobacter hepaticus GN=atpD PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.269e-54 Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEV----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QV+G VVDV F LP I A++V LVLEVA H+G+ VRTIAMD TEGL+RGQ V G PI VPVG LGRI NV G+ ID L+++ PIHREAP+F Q+T ++ TGIKVVDL+APY +GGK+GLFGGAGVGK ++ L+ Sbjct: 3 GKITQVMGPVVDVEFSSYLPMINEAIDVNFDIEGRKNNLVLEVAAHLGDNRVRTIAMDMTEGLIRGQEVKARGKPIEVPVGEAVLGRIFNVTGDVIDGGKPLESDLKWPIHREAPSFENQSTRTEMFETGIKVVDLIAPYSKGGKVGLFGGAGVGKTVVIMELI 166 HSP 2 Score: 67.781 bits (164), Expect = 2.269e-54 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + GV++ Sbjct: 158 KTVVIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKEGGVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRS7 (ATP synthase subunit beta OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=atpD PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.269e-54 Identity = 92/168 (54.76%), Postives = 119/168 (70.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F G LP I AL V D ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG I+VPVG+ TLGR+ NV+GE ID + + + PIH++APAF E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVVGPVVDVVFASGDKLPEINNALIVYKDGDKKQKIVLEVALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEAPFADDVNREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 2.269e-54 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STREM (ATP synthase subunit beta OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=atpD PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.269e-54 Identity = 92/168 (54.76%), Postives = 119/168 (70.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F G LP I AL V D ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG I+VPVG+ TLGR+ NV+GE ID + + + PIH++APAF E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVVGPVVDVVFASGDKLPEINNALIVYKDGDKKQKIVLEVALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEAPFADDVNREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 2.269e-54 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |