DY258338
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PRODI (ATP synthase subunit beta OS=Prochloron didemni GN=atpD PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.855e-54 Identity = 83/168 (49.40%), Postives = 111/168 (66.07%), Query Frame = 3
Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
+IG++ Q+IG VVD F G +P I AL V V + EV Q +G+ VR ++M T+GLVRG + +TG+PI VPVG+ TLGRI N++GEP+D +G + T PIHR AP F + T+ + TGIKV+DLL PY+RGGKIGLFGGAGVGK ++ L+
Sbjct: 9 NIGKITQIIGPVVDAEFPSGKMPRIYNALRVEGKNAAGQDVAVTCEVQQLLGDNQVRAVSMSSTDGLVRGMEITDTGAPINVPVGKATLGRIFNILGEPVDNQGPVYTAETSPIHRAAPKFTDLDTKPTVFETGIKVIDLLTPYRRGGKIGLFGGAGVGKTVIMMELI 176 HSP 2 Score: 67.781 bits (164), Expect = 3.855e-54 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877
KTV++MELINN+A HGG SVF GVGERT EGNDLY +M++ VIN
Sbjct: 168 KTVIMMELINNIAINHGGVSVFGGVGERTREGNDLYNEMIESKVIN 213
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACP2 (ATP synthase subunit beta OS=Bacillus pumilus (strain SAFR-032) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.856e-54 Identity = 90/169 (53.25%), Postives = 117/169 (69.23%), Query Frame = 3
Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYL-PIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
G++ Q++G VVDVRF++G LP I A+ V + + L LEVA H+G+ VRTIAM T+G+ RG ++ G PI+VPVG VTLGR+ NV+G+ ID L E PIHR+AP+F + +TE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+
Sbjct: 4 GRISQIMGPVVDVRFEDGHLPEIYNAIRVSHKAESESEVDIDLTLEVALHLGDDTVRTIAMASTDGVKRGMEAVDLGKPISVPVGNVTLGRVFNVLGDNIDLDEPLGVEAQRDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 70.0922 bits (170), Expect = 3.856e-54 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874
KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI
Sbjct: 164 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVI 208
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRA5 (ATP synthase subunit beta OS=Streptococcus agalactiae serotype V GN=atpD PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 3.856e-54 Identity = 92/168 (54.76%), Postives = 120/168 (71.43%), Query Frame = 3
Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
S G++ QV+G VVDV F G LP I AL V D S ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG I+VPVG+ TLGR+ NV+G+ ID E+ + PIH++AP+F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+
Sbjct: 2 SSGKIAQVVGPVVDVVFASGDKLPEINNALIVYKNGDKSQKVVLEVALELGDGLVRTIAMESTDGLTRGLEVLDTGRAISVPVGKDTLGRVFNVLGDAIDLEEPFAEDAERQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 3.856e-54 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R
Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRA1 (ATP synthase subunit beta OS=Streptococcus agalactiae serotype Ia GN=atpD PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 3.856e-54 Identity = 92/168 (54.76%), Postives = 120/168 (71.43%), Query Frame = 3
Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
S G++ QV+G VVDV F G LP I AL V D S ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG I+VPVG+ TLGR+ NV+G+ ID E+ + PIH++AP+F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+
Sbjct: 2 SSGKIAQVVGPVVDVVFASGDKLPEINNALIVYKNGDKSQKVVLEVALELGDGLVRTIAMESTDGLTRGLEVLDTGRAISVPVGKDTLGRVFNVLGDAIDLEEPFAEDAERQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 3.856e-54 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R
Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LEUCK (ATP synthase subunit beta OS=Leuconostoc citreum (strain KM20) GN=atpD PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.856e-54 Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 3
Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
S G+V QVIG VVDV F+ G +P I AL++ L +EV+ +G+G+VRTIAMD T+GL RG V +TG I VPVG TLGR+ NV+GEP+D G++ E IHR+AP++ + A +IL TGIKV+DLLAPY RGGKIGLFGGAGVGK L+ L+
Sbjct: 2 STGKVVQVIGPVVDVAFESGQQVPDINNALKIDKGDGQTLTVEVSLALGDGIVRTIAMDSTDGLQRGMSVTDTGDAIKVPVGEATLGRVFNVLGEPVDNNGEIAAETPRHSIHRDAPSYDDLANSTEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELI 167 HSP 2 Score: 68.5514 bits (166), Expect = 3.856e-54 Identity = 55/143 (38.46%), Postives = 71/143 (49.65%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
KTVLI ELI+N+A+ H G SVF GVGERT EGND+Y +M + GV+ G+ P ++ + VAL GL + + FR++EG K F F F TQ + LG P VGY G L R
Sbjct: 159 KTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMAESGVLKQTAMVYGQMNEPPGARMR-----VALT------GLTMAENFRDSEG-KDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGQLQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSEHT (ATP synthase subunit beta OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=atpD PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.857e-54 Identity = 90/164 (54.88%), Postives = 117/164 (71.34%), Query Frame = 3
Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR-LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
S+G+V Q+IGAVVD+ F + +P + AL V D + L LEV Q +G GVVRTIAM T+GL RG V+NTG I VPVG+ TLGRIMNV+GEPIDE G + E + IHR AP + EQ++ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+
Sbjct: 2 SLGKVVQIIGAVVDIEFPQNNVPAVYDALRVTDGDLTGLTLEVQQQLGGGVVRTIAMGTTDGLRRGASVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEEDRMSIHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 165 HSP 2 Score: 59.3066 bits (142), Expect = 3.857e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877
KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++
Sbjct: 157 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLD 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_METCA (ATP synthase subunit beta OS=Methylococcus capsulatus GN=atpD PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.857e-54 Identity = 91/163 (55.83%), Postives = 118/163 (72.39%), Query Frame = 3
Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
S G++ Q+IGAVVD F E LP I AL V + V LVLEV Q +G+GVVR IAM T+G+ RG V NTG+PI+VPVG TLGRIMNV+G+PIDEKG + + IHR+AP++ +QA ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+
Sbjct: 2 SSGKIVQIIGAVVDAEFPRESLPKIYDALRVDE--VGLVLEVQQQLGDGVVRCIAMGSTDGVRRGVTVTNTGAPISVPVGTETLGRIMNVLGDPIDEKGPIGEKERWGIHRKAPSYQDQAAANELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 60.4622 bits (145), Expect = 3.857e-54 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877
KTV +MELI N+A H G+SVFAGVGERT EGND Y +M + V++
Sbjct: 154 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_COXBU (ATP synthase subunit beta OS=Coxiella burnetii GN=atpD PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.857e-54 Identity = 91/161 (56.52%), Postives = 116/161 (72.05%), Query Frame = 3
Query: 288 GQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
G ++IGAVVDV F +P + AL+V +++ L LEV Q +G+GVVRTIAM TEGL R V NT PI VPVG+ TLGRIMNV+GEPIDE G + ++ LPIHR AP+F+EQ+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGK + L+
Sbjct: 7 GTTIEIIGAVVDVEFPRHAVPKVYDALQVDENN--LTLEVQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELI 165 HSP 2 Score: 60.4622 bits (145), Expect = 3.857e-54 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877
KTV +MELI N+A H G+SVFAGVGERT EGND Y +M + V++
Sbjct: 157 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLD 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_COXBR (ATP synthase subunit beta OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=atpD PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.857e-54 Identity = 91/161 (56.52%), Postives = 116/161 (72.05%), Query Frame = 3
Query: 288 GQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
G ++IGAVVDV F +P + AL+V +++ L LEV Q +G+GVVRTIAM TEGL R V NT PI VPVG+ TLGRIMNV+GEPIDE G + ++ LPIHR AP+F+EQ+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGK + L+
Sbjct: 7 GTTIEIIGAVVDVEFPRHAVPKVYDALQVDENN--LTLEVQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGTTELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELI 165 HSP 2 Score: 60.4622 bits (145), Expect = 3.857e-54 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877
KTV +MELI N+A H G+SVFAGVGERT EGND Y +M + V++
Sbjct: 157 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLD 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_COXBN (ATP synthase subunit beta OS=Coxiella burnetii (strain Dugway 5J108-111) GN=atpD PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.857e-54 Identity = 91/161 (56.52%), Postives = 116/161 (72.05%), Query Frame = 3
Query: 288 GQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
G ++IGAVVDV F +P + AL+V +++ L LEV Q +G+GVVRTIAM TEGL R V NT PI VPVG+ TLGRIMNV+GEPIDE G + ++ LPIHR AP+F+EQ+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGK + L+
Sbjct: 7 GTTIEIIGAVVDVEFPRHAVPKVYDALQVDENN--LTLEVQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELI 165 HSP 2 Score: 60.4622 bits (145), Expect = 3.857e-54 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 2
Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877
KTV +MELI N+A H G+SVFAGVGERT EGND Y +M + V++
Sbjct: 157 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLD 202 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |