DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ERYLH (ATP synthase subunit beta OS=Erythrobacter litoralis (strain HTCC2594) GN=atpD PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 3.971e-54 Identity = 108/165 (65.45%), Postives = 129/165 (78.18%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 G + QVIGAVVDV+F LP ILTALE + LVLEVAQH+GE VRTIAMDGT+GLVRGQ V+NTG+ I+VPVG TLGRIMNV+GEPID +G + + PIH EAPAFV+Q+T+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + + Sbjct: 13 GTISQVIGAVVDVQFPGELPAILTALETENGDTTLVLEVAQHLGENTVRTIAMDGTDGLVRGQEVINTGAQISVPVGPKTLGRIMNVVGEPIDMRGPVGADKANPIHAEAPAFVDQSTDAAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAK 177 HSP 2 Score: 77.7962 bits (190), Expect = 1.527e-13 Identity = 62/145 (42.76%), Postives = 72/145 (49.66%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI---NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+AK HGG SVFAGVGERT EGNDLY + + GVI GE E L + P A AR GL + + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 164 KTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKNEAGEAISEGSKVALVFGQMNEPPGARARVALS-GLTMAEYFRDEEG-QDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLSTDMGNLQER 303
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CAMLR (ATP synthase subunit beta OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=atpD PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.025e-54 Identity = 88/164 (53.66%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTAL----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + QV+G VVDV F + LP I A+ E+ +LVLEVA H+G+ VRTIAMD T+GLVRG + TG+PI+VPVG LGRI NV G+ IDE ++ + + IHR+ P F EQ+T+ +I TGIKVVDLLAPY +GGK+GLFGGAGVGK ++ L+ Sbjct: 3 GFISQVLGPVVDVEFKDYLPQINEAIVVNYELEGKECKLVLEVAAHLGDNKVRTIAMDMTDGLVRGLTAVATGNPISVPVGEKVLGRIFNVTGDLIDEGEEINFDKHWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELI 166 HSP 2 Score: 65.855 bits (159), Expect = 5.025e-54 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + V++ Sbjct: 158 KTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_WOLSU (ATP synthase subunit beta OS=Wolinella succinogenes GN=atpD PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.027e-54 Identity = 90/164 (54.88%), Postives = 111/164 (67.68%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEV----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QV+G VVDV FD LP I AL+V H +LVLEVA H+G+ VRTIAMD TEGL RG +V+ G I VPVG LGRI NV+G+ ID +LK IHR AP F Q+T+ ++ TGIKVVDLLAPY +GGK+GLFGGAGVGK ++ L+ Sbjct: 3 GRITQVMGPVVDVDFDSYLPAINEALDVNYDIEGHPKKLVLEVAAHIGDSRVRTIAMDMTEGLTRGTKVVARGKSIEVPVGEQVLGRIFNVVGDVIDGGDELKEPVKWSIHRTAPTFENQSTKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVVIMELI 166 HSP 2 Score: 67.781 bits (164), Expect = 5.027e-54 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + GV++ Sbjct: 158 KTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_OCEIH (ATP synthase subunit beta OS=Oceanobacillus iheyensis GN=atpD PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.027e-54 Identity = 95/165 (57.58%), Postives = 113/165 (68.48%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G+V Q++G VVDVRF++ LP + AL V D L LEVA H+G+ VRTIAM T+G RG V N G PI+VPVG VTLGR+ NV+GE ID L+ PIHREAP F +TE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 SKGRVTQLMGPVVDVRFEDAELPAVNNALVVRSDSGEELTLEVALHLGDNSVRTIAMSSTDGFKRGAEVENLGRPISVPVGDVTLGRVFNVLGEKIDLDEPLEEGVRRDPIHREAPDFENLSTETEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 166 HSP 2 Score: 70.0922 bits (170), Expect = 5.027e-54 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 158 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMSDSGVI 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERPY (ATP synthase subunit beta OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERPS (ATP synthase subunit beta OS=Yersinia pseudotuberculosis GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERPP (ATP synthase subunit beta OS=Yersinia pestis (strain Pestoides F) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERPN (ATP synthase subunit beta OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERPG (ATP synthase subunit beta OS=Yersinia pestis bv. Antiqua (strain Angola) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERPE (ATP synthase subunit beta OS=Yersinia pestis GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |