DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERPB (ATP synthase subunit beta OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERPA (ATP synthase subunit beta OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERP3 (ATP synthase subunit beta OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PROMH (ATP synthase subunit beta OS=Proteus mirabilis (strain HI4320) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 87/161 (54.04%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVD F + +P + ALEV++ +LVLEV Q +G G+VR IAM ++GL RG +V + G PI VPVG+ TLGRIMNV+G PID KG+++TE IHREAP + E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDAEFPQDSVPKVYDALEVMNGKEKLVLEVQQQLGGGIVRCIAMGTSDGLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDMKGEIETEERWSIHREAPTYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ENTS8 (ATP synthase subunit beta OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 88/161 (54.66%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + RLVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+G+PID KGD+ E IHR AP++ E ++ Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPKVYDALEVTNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LEGPL (ATP synthase subunit beta OS=Legionella pneumophila (strain Lens) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S+G V +VIGAVVDV F + +P + AL++VD LV EV Q +G+GVVRTIAM T+GL RG + NTG PI VPVG+ TLGRIM+V+G P+D+ G + E IHR+AP++ EQA Q++L TGIKV+DLL P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SLGTVVEVIGAVVDVEFPRDSVPKVNDALKLVDSD--LVFEVQQQLGDGVVRTIAMGTTDGLKRGLKAENTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LEGPH (ATP synthase subunit beta OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S+G V +VIGAVVDV F + +P + AL++VD LV EV Q +G+GVVRTIAM T+GL RG + NTG PI VPVG+ TLGRIM+V+G P+D+ G + E IHR+AP++ EQA Q++L TGIKV+DLL P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SLGTVVEVIGAVVDVEFPRDSVPKVNDALKLVDSD--LVFEVQQQLGDGVVRTIAMGTTDGLKRGLKAENTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LEGPC (ATP synthase subunit beta OS=Legionella pneumophila (strain Corby) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S+G V +VIGAVVDV F + +P + AL++VD LV EV Q +G+GVVRTIAM T+GL RG + NTG PI VPVG+ TLGRIM+V+G P+D+ G + E IHR+AP++ EQA Q++L TGIKV+DLL P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SLGTVVEVIGAVVDVEFPRDSVPKVNDALKLVDSD--LVFEVQQQLGDGVVRTIAMGTTDGLKRGLKAENTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LEGPA (ATP synthase subunit beta OS=Legionella pneumophila (strain Paris) GN=atpD PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.028e-54 Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S+G V +VIGAVVDV F + +P + AL++VD LV EV Q +G+GVVRTIAM T+GL RG + NTG PI VPVG+ TLGRIM+V+G P+D+ G + E IHR+AP++ EQA Q++L TGIKV+DLL P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SLGTVVEVIGAVVDVEFPRDSVPKVNDALKLVDSD--LVFEVQQQLGDGVVRTIAMGTTDGLKRGLKAENTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 59.6918 bits (143), Expect = 5.028e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SILPO (ATP synthase subunit beta OS=Silicibacter pomeroyi GN=atpD PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 5.187e-54 Identity = 106/166 (63.86%), Postives = 128/166 (77.11%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 G+V Q+IGAVVDV+FD+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG PI+VPVG TLGRI+NVIGEP+DEKG + IH+ AP+F EQ+T ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 6 GKVTQIIGAVVDVQFDDALPEILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGAVVTDTGGPISVPVGAATLGRILNVIGEPVDEKGPVNATETRAIHQPAPSFDEQSTSSDILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKV 171 HSP 2 Score: 78.9518 bits (193), Expect = 6.853e-14 Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINN+AK H G+SVFAGVGERT EGNDLY +M++ VI L + E+ L + P A AR GL L + FR+ G Sbjct: 157 KTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIESNVIKL--ENLEESQVALVYGQMNEPPGARARVALT-GLTLAEQFRDQSG 244 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |