DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BART1 (ATP synthase subunit beta OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=atpD PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 5.187e-54 Identity = 107/176 (60.80%), Postives = 135/176 (76.70%), Query Frame = 3 Query: 255 ITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 + E KG++G++ QVIGAVVDV+F+ LP IL ALE + RLVLEVAQH+GE VRTIAMD T+GL+RGQ+V++TG+ I+VPVG TLGRIMNVIGEP+D G + + IH+EAP +VEQ+T +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ + + Sbjct: 58 VKKEERAKGTVGEIKQVIGAVVDVQFEGALPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTDGLMRGQKVVDTGAQISVPVGEATLGRIMNVIGEPVDNVGPIASTKTRSIHQEAPEYVEQSTVSEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAK 233 HSP 2 Score: 82.8037 bits (203), Expect = 4.746e-15 Identity = 50/91 (54.95%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGV-INLGEQQG--EQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINN+AKAHGG+SVFAGVGERT EGNDLY +M++ GV +N E G E C L + P A AR GL + + FR+ Sbjct: 220 KTVLIMELINNIAKAHGGYSVFAGVGERTREGNDLYYEMIESGVNVNPKENNGSTEGSKCALVYGQMNEPPGARARVALS-GLTIAESFRD 309
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MYCHJ (ATP synthase subunit beta OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.553e-54 Identity = 84/163 (51.53%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G + Q+ G V+DV+F +E +P IL+ALEV + ++ EVAQH+GEG+VR IAM T L +G V +TGS I+VPVG+ L R+ NV+G+PID L + PIH +AP ++EQ +ILVTGIKV+DLL P+ +GGKIGLFGGAGVGK L+ L+ Sbjct: 6 NVGHIVQIFGPVIDVQFPNEHMPAILSALEVKINDESIIFEVAQHLGEGIVRAIAMSMTYNLSKGLEVYDTGSQISVPVGKQVLSRMFNVLGQPIDGGKPLDSFIKNPIHAKAPTYLEQKATSEILVTGIKVIDLLIPFIKGGKIGLFGGAGVGKTVLVQELI 168 HSP 2 Score: 69.3218 bits (168), Expect = 6.553e-54 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ ELINN+A HGG SVFAGVGER+ EGNDLY +M K GV++ Sbjct: 160 KTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLD 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MYCH7 (ATP synthase subunit beta OS=Mycoplasma hyopneumoniae (strain 7448) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.553e-54 Identity = 84/163 (51.53%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G + Q+ G V+DV+F +E +P IL+ALEV + ++ EVAQH+GEG+VR IAM T L +G V +TGS I+VPVG+ L R+ NV+G+PID L + PIH +AP ++EQ +ILVTGIKV+DLL P+ +GGKIGLFGGAGVGK L+ L+ Sbjct: 6 NVGHIVQIFGPVIDVQFPNEHMPAILSALEVKINDESIIFEVAQHLGEGIVRAIAMSMTYNLSKGLEVYDTGSQISVPVGKQVLSRMFNVLGQPIDGGKPLDSFIKNPIHAKAPTYLEQKATSEILVTGIKVIDLLIPFIKGGKIGLFGGAGVGKTVLVQELI 168 HSP 2 Score: 69.3218 bits (168), Expect = 6.553e-54 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ ELINN+A HGG SVFAGVGER+ EGNDLY +M K GV++ Sbjct: 160 KTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLD 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRPZ (ATP synthase subunit beta OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=atpD PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.553e-54 Identity = 92/168 (54.76%), Postives = 119/168 (70.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F G LP I AL V D ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG I+VPVG+ TLGR+ NV+GE ID E+ + PIH++AP+F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 67.0106 bits (162), Expect = 6.553e-54 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PECCP (ATP synthase subunit beta OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=atpD PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 6.554e-54 Identity = 88/161 (54.66%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G G+VR IAM ++GL RG V N PI VPVG+ TLGRIMNV+GEPID KGD+ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLDHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 6.554e-54 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MANSM (ATP synthase subunit beta OS=Mannheimia succiniciproducens (strain MBEL55E) GN=atpD PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 6.554e-54 Identity = 87/163 (53.37%), Postives = 116/163 (71.17%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F E +P + AL+V + L LEV Q +G G+VR IAM ++GL RG V NTG PI+VPVG TLGRIMNV+GEP+DE+G + E IHREAP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SAGKIVQIIGAVIDVEFPENAVPKVYDALKVAEGG--LTLEVQQQLGGGIVRCIAMGSSDGLKRGLSVSNTGKPISVPVGTKTLGRIMNVLGEPVDEQGPIGAEEEWAIHREAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 60.8474 bits (146), Expect = 6.554e-54 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H GFSVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB2_DINSH (ATP synthase subunit beta 2 OS=Dinoroseobacter shibae (strain DFL 12) GN=atpD2 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 6.774e-54 Identity = 106/166 (63.86%), Postives = 128/166 (77.11%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 G+V QVIGAVVDV+F++ LP IL AL ++ +LVLEVAQH+GE VRTIAMD TEGLVRG V +TG PIT+PVG TLGRIMNVIGEPIDEKG ++ IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 6 GKVTQVIGAVVDVQFEDTLPEILNALNTENNGKKLVLEVAQHLGENTVRTIAMDATEGLVRGAEVTDTGGPITIPVGNATLGRIMNVIGEPIDEKGPVEASESRAIHQPAPEFSEQSTGSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKV 171 HSP 2 Score: 78.1814 bits (191), Expect = 1.169e-13 Identity = 50/99 (50.51%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI---NLGEQQ-----GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINN+AK H G+SVFAGVGERT EGNDLY +M++ VI NL E Q G+ P ++A+ VAL GL L + FR+ G Sbjct: 157 KTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIESNVIKPDNLSESQVALVYGQMNEPPGARAR-----VALT------GLTLAEQFRDQSG 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HELMI (ATP synthase subunit beta OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=atpD PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.542e-54 Identity = 84/172 (48.84%), Postives = 114/172 (66.28%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD---------HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 + G+V QVIG VVD++F G LP I A+++ + + LE AQH+G VR +AM T+GL+RG + L+TG+PI+VPVG LGR+ NV+G+PIDE G + + PIHR+AP F ++L TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 NFGKVIQVIGPVVDIQFPPGQLPEIYNAIKIRSADQENYQGSFEIDITLEAAQHLGNNAVRCVAMSSTDGLMRGMKALDTGAPISVPVGAEILGRMFNVLGDPIDEAGQVAAKEVWPIHRKAPTFENLEPSTEVLETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVLIQELI 173 HSP 2 Score: 65.855 bits (159), Expect = 8.542e-54 Identity = 53/143 (37.06%), Postives = 73/143 (51.05%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A + G+SVFAGVGERT EGNDLY + + G++ N+ G+ P ++ + VAL+ GL++ + FR+ + + F F F TQ + LG P VGY G L R Sbjct: 165 KTVLIQELINNIAMEYSGYSVFAGVGERTREGNDLYNEFKESGILKNVAMVFGQMNEPPGARMR-----VALS------GLVMAEYFRDVQN-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLSTEMGQLQER 292
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MYCMO (ATP synthase subunit beta OS=Mycoplasma mobile GN=atpD PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 8.542e-54 Identity = 87/162 (53.70%), Postives = 115/162 (70.99%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKG-DLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q++G +VDV+F+E LP +L AL + ++ LEVAQH+G VVRTIAM TEGLVR V++T +PI+VPVG+ L + NVIGE ID + D TE + IHR+AP++ EQ +IL TGIKV+DLL PY +GGKIGLFGGAGVGK L+ L+ Sbjct: 5 GKIIQILGPIVDVKFNENQLPKLLNALTIEFEKTKITLEVAQHIGNDVVRTIAMSSTEGLVRNLEVIDTEAPISVPVGKNVLSHMFNVIGENIDNQSIDPNTEKW-SIHRKAPSYEEQTATSEILETGIKVIDLLVPYVKGGKIGLFGGAGVGKTVLVQELI 165 HSP 2 Score: 67.781 bits (164), Expect = 8.542e-54 Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ ELINN+A HGG SVFAGVGERT EGNDLY +M GV++ Sbjct: 157 KTVLVQELINNIAVHHGGLSVFAGVGERTREGNDLYYEMKASGVLD 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MYCH2 (ATP synthase subunit beta OS=Mycoplasma hyopneumoniae (strain 232) GN=atpD PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.542e-54 Identity = 84/163 (51.53%), Postives = 114/163 (69.94%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G + Q+ G V+DV+F +E +P IL+ALEV + ++ EVAQH+GEG+VR IAM T L +G V +TGS I+VPVG+ L R+ NV+G+PID L + PIH AP ++EQ +ILVTGIKV+DLL P+ +GGKIGLFGGAGVGK L+ L+ Sbjct: 6 NVGHIVQIFGPVIDVQFPNEHMPAILSALEVKINDESIIFEVAQHLGEGIVRAIAMSMTYNLSKGLEVYDTGSQISVPVGKQVLSRMFNVLGQPIDGGKPLDSFIKNPIHANAPTYLEQKATSEILVTGIKVIDLLIPFIKGGKIGLFGGAGVGKTVLVQELI 168 HSP 2 Score: 69.3218 bits (168), Expect = 8.542e-54 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ ELINN+A HGG SVFAGVGER+ EGNDLY +M K GV++ Sbjct: 160 KTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLD 205 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |