DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAHJ (ATP synthase subunit beta OS=Staphylococcus haemolyticus (strain JCSC1435) GN=atpD PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 8.542e-54 Identity = 93/168 (55.36%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLK-TEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G+V QV+G V+DVRF+ +P I AL + D + L LEVA +G+ VVRTIAMD T+G+ RG V NTG I+VPVG VTLGR+ NV+G+ ID + L + PIHR++P F E +TE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 SNGRVTQVMGPVIDVRFEHNEVPEINNALIIEVPKEDGTFELTLEVALQLGDDVVRTIAMDSTDGVQRGMEVQNTGKDISVPVGEVTLGRVFNVLGDTIDLEDKLDGSVRRDPIHRQSPNFDELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 70.0922 bits (170), Expect = 8.542e-54 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMRDSGVI 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRU0 (ATP synthase subunit beta OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=atpD PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 8.543e-54 Identity = 92/168 (54.76%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYL-PIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F G LP I AL V D ++VLEVA +G+G+VRTIAM+ T+GL RG VL+TG I+VPVG+ TLGR+ NV+GE ID + PIH++APAF E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVVGPVVDVVFANGEKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLDEPFAADAAREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 8.543e-54 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ECOHS (ATP synthase subunit beta OS=Escherichia coli O9:H4 (strain HS) GN=atpD PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 8.544e-54 Identity = 88/161 (54.66%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + S RLVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGSERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 8.544e-54 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_NITOC (ATP synthase subunit beta OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=atpD PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 8.544e-54 Identity = 90/163 (55.21%), Postives = 117/163 (71.78%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G+ Q+IGAVVDV F E +P + AL + D V L LEV Q +G+GVVRTIAM G++GL RG V NTG+PI+VPVG TLGRIM+V+GEP+DE G + E IHR+APA+ E + ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 STGKTVQIIGAVVDVEFPRESIPKVYHALRIDD--VGLTLEVQQQLGDGVVRTIAMGGSDGLRRGMAVTNTGAPISVPVGTKTLGRIMDVLGEPVDEAGPVGEEERWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 59.6918 bits (143), Expect = 8.544e-54 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMKDSQVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STAS1 (ATP synthase subunit beta OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=atpD PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.114e-53 Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID--EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +G+V QV+G V+DVRF+ P + VVD +V L LEVA +G+ VVRTIAMD T+G+ RG V ++G I+VPVG TLGR+ NV+G+ ID EK D + PIHREAPAF + +T+ +IL TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 LGRVTQVMGPVIDVRFEHNEVPEINNALVVDVERDEGTVSLTLEVALQLGDDVVRTIAMDSTDGVKRGTEVRDSGDSISVPVGDATLGRVFNVLGDTIDLDEKLDTSVKRD-PIHREAPAFDQLSTKVEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 70.8626 bits (172), Expect = 1.114e-53 Identity = 58/143 (40.56%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI G+ P ++ + VAL+ GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMSDSGVIKKTAMVFGQMNEPPGARMR-----VALS------GLTMAEHFRDVQG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STRA3 (ATP synthase subunit beta OS=Streptococcus agalactiae serotype III GN=atpD PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.114e-53 Identity = 91/168 (54.17%), Postives = 119/168 (70.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QV+G VVDV F G LP I AL V D S ++VLEV +G+G+VRTIAM+ T+GL RG VL+TG I+VPVG+ TLGR+ NV+G+ ID E+ + PIH++AP+F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIAQVVGPVVDVVFASGDKLPEINNALIVYKNGDKSQKVVLEVTLELGDGLVRTIAMESTDGLTRGLEVLDTGRAISVPVGKDTLGRVFNVLGDAIDLEEPFAEDAERQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.1662 bits (165), Expect = 1.114e-53 Identity = 57/143 (39.86%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PHOLL (ATP synthase subunit beta OS=Photorhabdus luminescens subsp. laumondii GN=atpD PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.114e-53 Identity = 89/161 (55.28%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG V + G PI VPVG+ TLGRIMNV+GEPID KGD+ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDTVPKVYDALEVQNGEAKLVLEVQQQLGGGVVRCIAMGTSDGLSRGLSVTDLGHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRPAPSYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 1.114e-53 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB2_LISW6 (ATP synthase subunit beta 2 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=atpD2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.452e-53 Identity = 97/171 (56.73%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S GQV QV+G VVDV+F+ G LP I AL + S +L LEVA +G+ VVRTIAM T+G+ RG V++TGSPITVPVG VTLGR+ NV+G ID L ++ IHREAP F + AT +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 SKGQVIQVMGPVVDVKFEGGNLPEIYNALVIEYKSDAEEAPTSQLTLEVAIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 67.781 bits (164), Expect = 1.452e-53 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVI 208
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB2_LISMO (ATP synthase subunit beta 2 OS=Listeria monocytogenes GN=atpD2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.452e-53 Identity = 97/171 (56.73%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S GQV QV+G VVDV+F+ G LP I AL + S +L LEVA +G+ VVRTIAM T+G+ RG V++TGSPITVPVG VTLGR+ NV+G ID L ++ IHREAP F + AT +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 SKGQVIQVMGPVVDVKFEGGNLPEIYNALVIEYKSDAEEAPTSQLTLEVAIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 67.781 bits (164), Expect = 1.452e-53 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVI 208
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB2_LISMF (ATP synthase subunit beta 2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=atpD2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.452e-53 Identity = 97/171 (56.73%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S GQV QV+G VVDV+F+ G LP I AL + S +L LEVA +G+ VVRTIAM T+G+ RG V++TGSPITVPVG VTLGR+ NV+G ID L ++ IHREAP F + AT +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 SKGQVIQVMGPVVDVKFEGGNLPEIYNALVIEYKSDAEEAPTSQLTLEVAIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 67.781 bits (164), Expect = 1.452e-53 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVI 208 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |