DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB2_LISIN (ATP synthase subunit beta 2 OS=Listeria innocua GN=atpD2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.452e-53 Identity = 97/171 (56.73%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S GQV QV+G VVDV+F+ G LP I AL + S +L LEVA +G+ VVRTIAM T+G+ RG V++TGSPITVPVG VTLGR+ NV+G ID L ++ IHREAP F + AT +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 SKGQVIQVMGPVVDVKFEGGNLPEIYNALVIEYKSDAEEAPTSQLTLEVAIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 67.781 bits (164), Expect = 1.452e-53 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVI 208
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HELPJ (ATP synthase subunit beta OS=Helicobacter pylori J99 GN=atpD PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.452e-53 Identity = 91/168 (54.17%), Postives = 110/168 (65.48%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTAL----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K G++ QV+G VVDV F+ LP I AL EV LVLEVA H+G VR IAMD TEGLVR Q V G I VPVG LGRI NV+GE ID LK PIHR+AP+F +Q+T+ ++ TGIKV+DLLAPY +GGK+GLFGGAGVGK ++ L+ Sbjct: 2 KAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKALVLEVAAHLGGNRVRAIAMDMTEGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELI 169 HSP 2 Score: 67.0106 bits (162), Expect = 1.452e-53 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + GV++ Sbjct: 161 KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLD 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CAMFF (ATP synthase subunit beta OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.452e-53 Identity = 88/164 (53.66%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEV----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + QV+G VVDV F + LP I A+EV ++ +L+LE A H+G+ VRTIAMD +EGL RG + GSPI+VPVG LGRI NVIG+ IDE + K + IHR+ PAF +Q+T+ +I TGIKVVDLLAPY +GGK+GLFGGAGVGK ++ L+ Sbjct: 3 GIISQVMGPVVDVDFKDYLPKINEAIEVNFTVEGNTHKLILETAAHLGDNRVRTIAMDMSEGLTRGLDAIALGSPISVPVGEKVLGRIFNVIGDLIDEGEEEKFDKKWSIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELI 166 HSP 2 Score: 68.1662 bits (165), Expect = 1.452e-53 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + GV++ Sbjct: 158 KTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESGVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YEAST (ATP synthase subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP2 PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 1.509e-53 Identity = 107/166 (64.46%), Postives = 131/166 (78.92%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 G+V VIGA+VDV F++ LP IL ALE+ +LVLEVAQH+GE VRTIAMDGTEGLVRG++VL+TG PI+VPVGR TLGRI+NVIGEPIDE+G +K++ PIH + P+F EQ+T +IL TGIKVVDLLAPY RGGKIGLFGGAGVGK + L+ + + Sbjct: 44 GKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAK 209 HSP 2 Score: 84.3445 bits (207), Expect = 1.631e-15 Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTV I ELINN+AKAHGGFSVF GVGERT EGNDLYR+M + GVINL +GE ++ L + P A AR GL + + FR+ EG Sbjct: 196 KTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINL---EGESKVA-LVFGQMNEPPGARARVALT-GLTIAEYFRDEEG 281
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GLOVI (ATP synthase subunit beta OS=Gloeobacter violaceus GN=atpD PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.892e-53 Identity = 87/168 (51.79%), Postives = 116/168 (69.05%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G + Q+IG VVD F EG LP I AL + + +RL EV Q +G+ VR ++M T+G+VRG + ++TG+PITVPVG+ TLGRI NV+GEPIDE G ++ IHR AP F + T+ +I TGIKV+DLLAPY++GGKIGLFGGAGVGK L+ L+ Sbjct: 8 NVGYITQIIGPVVDAEFPEGDLPAIYNALLIEGKTDSGLDIRLTCEVQQLLGDKKVRAVSMSTTDGMVRGMKAIDTGAPITVPVGKSTLGRIFNVLGEPIDELGPVEIVDKFSIHRSAPKFTDLVTQPEIFETGIKVIDLLAPYRKGGKIGLFGGAGVGKTVLIQELI 175 HSP 2 Score: 62.003 bits (149), Expect = 1.892e-53 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI+N+AK H G SVF GVGERT EGNDLY + + V+ Sbjct: 167 KTVLIQELIHNIAKEHSGVSVFGGVGERTREGNDLYNEFKESNVL 211
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HELPG (ATP synthase subunit beta OS=Helicobacter pylori (strain G27) GN=atpD PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.892e-53 Identity = 91/168 (54.17%), Postives = 110/168 (65.48%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTAL----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K G++ QV+G VVDV F+ LP I AL EV LVLEVA H+G VR IAMD TEGLVR Q V G I VPVG LGRI NV+GE ID LK PIHR+AP+F +Q+T+ ++ TGIKV+DLLAPY +GGK+GLFGGAGVGK ++ L+ Sbjct: 2 KAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMTEGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELI 169 HSP 2 Score: 67.0106 bits (162), Expect = 1.892e-53 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + GV++ Sbjct: 161 KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLD 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACPL (ATP synthase subunit beta OS=Lactobacillus plantarum GN=atpD PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.892e-53 Identity = 93/166 (56.02%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVV-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G+V QVIG VVDV F ++ LP I AL + D+ L +EV+ +G+GVVRT+AMDGT+GL RG V +TGS ITVPVG+ TLGR+ NV+GE ID + + PIHR+AP + E T ++L TGIKV+DLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 2 STGKVVQVIGPVVDVEFSLNDKLPDINNALIIQKDNDDTLTVEVSLELGDGVVRTVAMDGTDGLRRGMTVEDTGSSITVPVGKETLGRVFNVLGETIDGGPEFGPDAERNPIHRDAPKYDELTTSTEVLETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELI 167 HSP 2 Score: 65.855 bits (159), Expect = 1.892e-53 Identity = 55/143 (38.46%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ H G SVF GVGERT EGNDLY +M GV+ N G+ P ++ + VAL GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 159 KTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLKNTAMVYGQMNEPPGARMR-----VALT------GLTIAEYFRDVQG-QDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGQLQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_YERE8 (ATP synthase subunit beta OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=atpD PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.893e-53 Identity = 88/161 (54.66%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V+N PI VPVG+ TLGRIMNV+G+PID KG + E IHREAP++ + A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGAAEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 1.893e-53 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SHISS (ATP synthase subunit beta OS=Shigella sonnei (strain Ss046) GN=atpD PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.893e-53 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + RLVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 1.893e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SHIFL (ATP synthase subunit beta OS=Shigella flexneri GN=atpD PE=3 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 1.893e-53 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + RLVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 1.893e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |