DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ECO55 (ATP synthase subunit beta OS=Escherichia coli (strain 55989 / EAEC) GN=atpD PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.893e-53 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + RLVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 1.893e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ECO45 (ATP synthase subunit beta OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=atpD PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.893e-53 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + RLVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 1.893e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ECO27 (ATP synthase subunit beta OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=atpD PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.893e-53 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + RLVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 1.893e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ECO24 (ATP synthase subunit beta OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=atpD PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.893e-53 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + RLVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 1.893e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACTSZ (ATP synthase subunit beta OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=atpD PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.893e-53 Identity = 86/163 (52.76%), Postives = 118/163 (72.39%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P + AL+V + L LEV Q +G GVVR IA+ ++GL RG V NTG+PI+VPVG TLGRIMNV+GEPID+KG++ E IHREAP++ +Q+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SAGKIVQIIGAVIDVEFPQNAVPKVYDALKVEEGG--LTLEVQQQLGGGVVRCIALGTSDGLKRGLAVKNTGNPISVPVGTKTLGRIMNVLGEPIDQKGEIGAEETWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 61.6178 bits (148), Expect = 1.893e-53 Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H GFSVFAGVGERT EGND Y +M + V++ Sbjct: 154 KTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTESNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_OENOB (ATP synthase subunit beta OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=atpD PE=3 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 2.467e-53 Identity = 91/165 (55.15%), Postives = 115/165 (69.70%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG--LPPILTALEV--VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDL-KTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G V QVIG +VDV+F + LP I AL+V +D S L +EV+ +G+ VVRTIAMD T+GL RG +VL+TG+PI VPVG TLGR+ NV+GEP+D + + PIHR AP + E AT ++L TGIKV+DLL PY RGGK GLFGGAGVGK L+ L+ Sbjct: 4 GTVLQVIGPIVDVQFPDNKKLPDINNALKVQRIDGS-ELTIEVSIDLGDSVVRTIAMDSTDGLTRGMKVLDTGAPIEVPVGEATLGRVFNVLGEPVDGGDPIPNSVDRHPIHRSAPKYDELATSTEVLETGIKVIDLLEPYLRGGKTGLFGGAGVGKTVLIQELI 167 HSP 2 Score: 67.3958 bits (163), Expect = 2.467e-53 Identity = 55/143 (38.46%), Postives = 69/143 (48.25%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ H G SVF GVGERT EGND+Y +M GV+ N G+ P ++ + V L GL + + FR+ EG K F F F TQ + LG P VGY G L R Sbjct: 159 KTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLKNTAMVYGQMNEPPGARMR-----VGLT------GLTMAEDFRDQEG-KDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGQLQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DEHE1 (ATP synthase subunit beta OS=Dehalococcoides ethenogenes (strain 195) GN=atpD PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.467e-53 Identity = 83/161 (51.55%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QVIG+VVDV F + +P + ALE+ + ++VLEV H+G V+ ++ T+GL RG V++T P++VPVGR TLGRI NV+GEP+D +GD+K E +PIHR APA E + Q+L TG+KV+DL+AP+ RGGKIG GGAGVGK L+ L+ Sbjct: 4 GKVIQVIGSVVDVEFSADSMPALFNALEIPRDNGKMVLEVQSHVGNNRVKCLSFTPTDGLERGAEVIDTKRPLSVPVGRNTLGRIFNVLGEPLDNRGDVKAEKTMPIHRSAPAMDELESSAQVLETGLKVIDLIAPFARGGKIGALGGAGVGKTVLIQELI 164 HSP 2 Score: 62.3882 bits (150), Expect = 2.467e-53 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI N+A H GFSVFAGVGER+ EGNDL+ +M GV+ Sbjct: 156 KTVLIQELIRNIATEHEGFSVFAGVGERSREGNDLWHEMEDSGVL 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SODGM (ATP synthase subunit beta OS=Sodalis glossinidius (strain morsitans) GN=atpD PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.467e-53 Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G V QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G GVVR IAM ++GL RG +V + I VPVG+ TLGRIMNV+GEP+D KGD+ E IHR AP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GNVIQVIGAVVDVEFPQDAVPKVYNALEVENGAAKLVLEVEQQLGGGVVRCIAMGSSDGLRRGLKVTDLERAIEVPVGKATLGRIMNVLGEPVDMKGDIGEEERWSIHRPAPSYEELASSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 2.467e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACCB (ATP synthase subunit beta OS=Lactobacillus casei (strain BL23) GN=atpD PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.215e-53 Identity = 91/166 (54.82%), Postives = 113/166 (68.07%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVVDHS-VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYL-PIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F + LP I AL V +LVLEVA +G+GV+RTIAMD T+GL R V +TG PI+VPVG+ TLGR+ NV+G+PID +H IHR+AP F + T +IL TGIKV+DLL PY RGGK+GLFGGAGVGK L+ L+ Sbjct: 4 STGKIAQVIGPVVDVAFPINGDLPEINNALTVAKKDGSQLVLEVALELGDGVMRTIAMDSTDGLQRNMAVQDTGGPISVPVGKDTLGRVFNVLGDPIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.3218 bits (168), Expect = 3.215e-53 Identity = 57/143 (39.86%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GV+ N G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACC3 (ATP synthase subunit beta OS=Lactobacillus casei (strain ATCC 334) GN=atpD PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.215e-53 Identity = 91/166 (54.82%), Postives = 113/166 (68.07%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVVDHS-VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYL-PIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F + LP I AL V +LVLEVA +G+GV+RTIAMD T+GL R V +TG PI+VPVG+ TLGR+ NV+G+PID +H IHR+AP F + T +IL TGIKV+DLL PY RGGK+GLFGGAGVGK L+ L+ Sbjct: 4 STGKIAQVIGPVVDVAFPINGDLPEINNALTVAKKDGSQLVLEVALELGDGVMRTIAMDSTDGLQRNMAVQDTGGPISVPVGKDTLGRVFNVLGDPIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 69.3218 bits (168), Expect = 3.215e-53 Identity = 57/143 (39.86%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GV+ N G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGQLQER 288 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |