DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_TERTT (ATP synthase subunit beta OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=atpD PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 4.192e-53 Identity = 82/163 (50.31%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P + AL+V S L LEV Q +G+G+VR IAM +EGL R V TG+P++VPVG TLGRIM+V+G PIDE G + + +PIHR+APA+ E ++ +L TG+KV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDSVPAVYDALKV--ESKGLTLEVQQQLGDGIVRCIAMGSSEGLSRNLEVTGTGAPVSVPVGNETLGRIMDVLGNPIDECGPIGEQERMPIHRKAPAYDELSSTTDLLETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 67.3958 bits (163), Expect = 4.192e-53 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 154 KTVNMMELINNIALEHSGLSVFAGVGERTREGNDFYHEMQESGVVNV 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STACT (ATP synthase subunit beta OS=Staphylococcus carnosus (strain TM300) GN=atpD PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.192e-53 Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVR------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDL-KTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +G+V Q++G V+DVRF+ + LP I AL V+D + L LEVA +G+ VVRTIAMD T+G+ RG V +TG PI+VPVG TLGR+ NV+G+PID G + ++ PIHR+ P F E +T+ +IL TGIKVVDLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 3 VGRVTQIMGPVIDVRFNHDELPKINNAL-VLDVPKKDGTTESLTLEVALELGDDVVRTIAMDSTDGIKRGDDVKDTGRPISVPVGDDTLGRVFNVLGDPIDNAGPIPESVPREPIHRQPPPFDELSTKVEILETGIKVVDLLAPYIKGGKVGLFGGAGVGKTVLIQELI 170 HSP 2 Score: 69.707 bits (169), Expect = 4.192e-53 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Sbjct: 162 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVI 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HELPH (ATP synthase subunit beta OS=Helicobacter pylori (strain HPAG1) GN=atpD PE=3 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 4.192e-53 Identity = 90/164 (54.88%), Postives = 109/164 (66.46%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTAL----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QV+G VVDV F+ LP I AL EV LVLEVA H+G VR IAMD TEGLVR Q V G I VPVG LGRI NV+GE ID LK PIHR+AP+F +Q+T+ ++ TGIKV+DLLAPY +GGK+GLFGGAGVGK ++ L+ Sbjct: 3 GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMTEGLVRNQIVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELI 166 HSP 2 Score: 67.0106 bits (162), Expect = 4.192e-53 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + GV++ Sbjct: 158 KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HELAH (ATP synthase subunit beta OS=Helicobacter acinonychis (strain Sheeba) GN=atpD PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 4.192e-53 Identity = 90/164 (54.88%), Postives = 109/164 (66.46%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTAL----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QV+G VVDV F+ LP I AL EV LVLEVA H+G VR IAMD TEGLVR Q V G I VPVG LGRI NV+GE ID LK PIHR+AP+F +Q+T+ ++ TGIKV+DLLAPY +GGK+GLFGGAGVGK ++ L+ Sbjct: 3 GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMTEGLVRNQVVKARGKMIEVPVGEGVLGRIFNVVGESIDNLEPLKPSLIWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELI 166 HSP 2 Score: 67.0106 bits (162), Expect = 4.192e-53 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + GV++ Sbjct: 158 KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CAMC5 (ATP synthase subunit beta OS=Campylobacter curvus (strain 525.92) GN=atpD PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.192e-53 Identity = 87/164 (53.05%), Postives = 113/164 (68.90%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVV----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + QV+G VVDV F++ LP I A+EV RL+LEVA H+G+ VRTIAMD +EGL RG G+PI+VPVG LGRI NV+G+ IDE ++ + + IHR+ P F EQ+T+ +I TGIKVVDLLAPY +GGK+GLFGGAGVGK ++ L+ Sbjct: 3 GVISQVMGPVVDVDFNDYLPKINEAIEVYFEVEGKKNRLILEVAAHLGDNRVRTIAMDMSEGLTRGLEATALGAPISVPVGEKVLGRIFNVVGDLIDEGEGVEFDKHWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELI 166 HSP 2 Score: 65.855 bits (159), Expect = 4.192e-53 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + V++ Sbjct: 158 KTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESNVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB2_PSYIN (ATP synthase subunit beta 2 OS=Psychromonas ingrahamii (strain 37) GN=atpD2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.192e-53 Identity = 93/164 (56.71%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDL-KTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIGAVVDV F E +P I +AL V + L +EV Q +G GVVR IAM ++GL RG V +TG PITVPVG TLGRIMNV+GEPID G++ TEHY IHREAP + EQ+ L GIKV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 2 STGKIIQVIGAVVDVEFPQETVPNIYSALIVT--AKNLTMEVQQQIGGGVVRCIAMGASDGLSRGLDVTDTGKPITVPVGTATLGRIMNVLGEPIDMCGEIGATEHY-GIHREAPTYEEQSASVATLEVGIKVIDLICPFSKGGKIGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 66.2402 bits (160), Expect = 4.192e-53 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 154 KTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYFEMQEAGVVNV 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_COLP3 (ATP synthase subunit beta OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=atpD PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.193e-53 Identity = 90/164 (54.88%), Postives = 117/164 (71.34%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVR-LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G+V Q+IGAVVDV F + +P + AL++ + + LVLEV Q +G GVVRTIAM ++GL RG V+NTG I VPVG TLGRIMNV+GEPIDE G + + IHREAPA+ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 STGKVVQIIGAVVDVEFPQDAVPQVYDALKITEGDLEGLVLEVQQQLGGGVVRTIAMGTSDGLRRGLNVVNTGQGIQVPVGVETLGRIMNVLGEPIDEAGPIGEKDRWSIHREAPAYAEQSMSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 165 HSP 2 Score: 59.3066 bits (142), Expect = 4.193e-53 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 157 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLD 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SALTY (ATP synthase subunit beta OS=Salmonella typhimurium GN=atpD PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 4.193e-53 Identity = 86/161 (53.42%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEKLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 4.193e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SALTI (ATP synthase subunit beta OS=Salmonella typhi GN=atpD PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 4.193e-53 Identity = 86/161 (53.42%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEKLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 4.193e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SALSV (ATP synthase subunit beta OS=Salmonella schwarzengrund (strain CVM19633) GN=atpD PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 4.193e-53 Identity = 86/161 (53.42%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEKLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 4.193e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |