DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACAC (ATP synthase subunit beta OS=Lactobacillus acidophilus GN=atpD PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.463e-53 Identity = 88/166 (53.01%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVV-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLP-IHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV+F D+ LP I AL V+ +VLEV +G+GV+RTIAM+ T+GL RG +V +TG+PI+VPVG TLGR+ NV+G+PID +H IH+EAP + + T ++IL TGIKV+DLL PY RGGK+GLFGGAGVGK ++ L+ Sbjct: 2 SEGEIVQVIGPVVDVKFPIDKNLPDINNALRVIKSEDESIVLEVTLELGDGVLRTIAMESTDGLRRGMKVEDTGAPISVPVGEDTLGRVFNVLGQPIDGGPAFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELI 167 HSP 2 Score: 65.4698 bits (158), Expect = 5.463e-53 Identity = 55/143 (38.46%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KT +I ELI+N+A+ HGG SVF GVGERT EGNDLY +M GV++ G+ P ++ + VAL GL L + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 159 KTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMR-----VALT------GLTLAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ALCBS (ATP synthase subunit beta OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=atpD PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 5.465e-53 Identity = 87/163 (53.37%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F E +P + AL V LEV Q +G+GVVRTIAM TEGL RG V + G PI VPVG TLGRIM+V+G PIDE G + E +PIHR AP + +QA ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPREAVPKVYDALSV--DGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLGVTDNGEPIQVPVGTKTLGRIMDVLGRPIDEAGPIGEEERMPIHRAAPTYADQAATNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 60.8474 bits (146), Expect = 5.465e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H GFSVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSEU2 (ATP synthase subunit beta OS=Pseudomonas syringae pv. syringae (strain B728a) GN=atpD PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 5.466e-53 Identity = 89/163 (54.60%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P I ALEV + LEV Q +G+GVVRTIAM TEGL RG V ++G+ I+VPVG+ TLGRIM+V+G PIDE G + TE IHR AP+F EQA +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDSVPSIYNALEV-QSAAGTTLEVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 163 HSP 2 Score: 59.6918 bits (143), Expect = 5.466e-53 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 155 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSE14 (ATP synthase subunit beta OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=atpD PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 5.466e-53 Identity = 89/163 (54.60%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P I ALEV + LEV Q +G+GVVRTIAM TEGL RG V ++G+ I+VPVG+ TLGRIM+V+G PIDE G + TE IHR AP+F EQA +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDSVPSIYNALEV-QSAAGTTLEVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFTKGGKVGLFGGAGVGKTVNMMELI 163 HSP 2 Score: 59.6918 bits (143), Expect = 5.466e-53 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 155 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SCHPO (ATP synthase subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=atp2 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 5.735e-53 Identity = 110/172 (63.95%), Postives = 133/172 (77.33%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG--LPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 K + G + QVIGAVVD +F++ LP IL ALEV + + RLVLEVAQH+GE VRTIAMDGTEGLVRG V++TGSPI++PVG TLGRIMNVIGEP+DE+G +K Y PIH +AP+F EQ+T +IL TGIKVVDLLAPY RGGKIGLFGGAGVGK + L+ + + Sbjct: 51 KHNKGSIKQVIGAVVDCQFEDADSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTEGLVRGTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAPSFEEQSTTPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAK 222 HSP 2 Score: 81.2629 bits (199), Expect = 1.381e-14 Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL-GEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTV I ELINN+AKAHGG+SVF GVGERT EGNDLYR+M + GVI L GE + +++ VAL GL + + FR+ EG Sbjct: 209 KTVFIQELINNIAKAHGGYSVFTGVGERTREGNDLYREMQETGVIKLEGESKAALVFGQMNEPPGARARVALT------GLTVAEYFRDIEG 294
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACH4 (ATP synthase subunit beta OS=Lactobacillus helveticus (strain DPC 4571) GN=atpD PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.122e-53 Identity = 87/166 (52.41%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVV-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEH-YLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG V+DV+F D+ LP I AL V+ + +VLEV +G+GV+RTIAM+ T+GL RG +V +TG PI+VPVG TLGR+ NV+G+PID +H IH+EAP + + T ++IL TGIKV+DLL PY RGGK+GLFGGAGVGK ++ L+ Sbjct: 2 SEGEIVQVIGPVIDVKFPIDKNLPNINNALRVIKSENESIVLEVTVELGDGVLRTIAMESTDGLRRGMKVEDTGGPISVPVGEDTLGRVFNVLGQPIDGGPAFSKDHPRESIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELI 167 HSP 2 Score: 65.4698 bits (158), Expect = 7.122e-53 Identity = 55/143 (38.46%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KT +I ELI+N+A+ HGG SVF GVGERT EGNDLY +M GV++ G+ P ++ + VAL GL L + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 159 KTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMR-----VALT------GLTLAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACLS (ATP synthase subunit beta OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=atpD PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.123e-53 Identity = 90/169 (53.25%), Postives = 115/169 (68.05%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTAL----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F D LP I AL +V ++ LEVA +G+G VRTIAM+ T+GL RG VL+TG ++VPVG TLGR+ NV+G+ ID D + PIH++AP F E +T ++LVTGIKVVDLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKITQVIGPVVDVEFGSDAKLPEINNALIVYKDVNGLKTKITLEVALELGDGAVRTIAMESTDGLTRGLEVLDTGKAVSVPVGESTLGRVFNVLGDVIDGGEDFPADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 170 HSP 2 Score: 67.0106 bits (162), Expect = 7.123e-53 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI Sbjct: 162 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVI 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACLM (ATP synthase subunit beta OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=atpD PE=3 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 7.123e-53 Identity = 90/169 (53.25%), Postives = 115/169 (68.05%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTAL----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F D LP I AL +V ++ LEVA +G+G VRTIAM+ T+GL RG VL+TG ++VPVG TLGR+ NV+G+ ID D + PIH++AP F E +T ++LVTGIKVVDLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKITQVIGPVVDVEFGSDAKLPEINNALIVYKDVNGLKTKITLEVALELGDGAVRTIAMESTDGLTRGLEVLDTGKAVSVPVGESTLGRVFNVLGDVIDGGEDFPADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 170 HSP 2 Score: 67.0106 bits (162), Expect = 7.123e-53 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GVI Sbjct: 162 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVI 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SERP5 (ATP synthase subunit beta OS=Serratia proteamaculans (strain 568) GN=atpD PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.124e-53 Identity = 88/161 (54.66%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G GVVR IAM ++GL RG +V + PI VPVG+ TLGRIMNV+GEPID KGD+ E IHR AP++ + A Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVENGANKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVTDLDHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRPAPSYEDLANSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.3066 bits (142), Expect = 7.124e-53 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ENT38 (ATP synthase subunit beta OS=Enterobacter sp. (strain 638) GN=atpD PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 7.124e-53 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + LVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+G+PID KGD+ E IHR AP++ E ++ Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLAVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEDRWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 7.124e-53 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |