DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SALPK (ATP synthase subunit beta OS=Salmonella paratyphi A (strain AKU_12601) GN=atpD PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 7.124e-53 Identity = 86/161 (53.42%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVDFPQDAVPRVYDALEVQNGNEKLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 7.124e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SALPA (ATP synthase subunit beta OS=Salmonella paratyphi A GN=atpD PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 7.124e-53 Identity = 86/161 (53.42%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVDFPQDAVPRVYDALEVQNGNEKLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 7.124e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_KLEP3 (ATP synthase subunit beta OS=Klebsiella pneumoniae (strain 342) GN=atpD PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 7.124e-53 Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + LVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+G+P+D KGD+ E IHR AP++ E ++ Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYEALEVQNGKEVLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 7.124e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CITK8 (ATP synthase subunit beta OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=atpD PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 7.124e-53 Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + + LVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+GEP+D KG++ E IHR AP++ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEHLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 7.124e-53 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSESM (ATP synthase subunit beta OS=Pseudomonas syringae pv. tomato GN=atpD PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 7.125e-53 Identity = 89/163 (54.60%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P I ALEV + LEV Q +G+GVVRTIAM TEGL RG V ++G+ I+VPVG+ TLGRIM+V+G PIDE G + TE IHR AP+F EQA +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDSVPSIYNALEVKS-AAGTTLEVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 163 HSP 2 Score: 59.6918 bits (143), Expect = 7.125e-53 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 155 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHILO (ATP synthase subunit beta OS=Rhizobium loti GN=atpD PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 7.490e-53 Identity = 107/168 (63.69%), Postives = 129/168 (76.79%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 G +G+V QVIGAVVDV+F + LP IL ALE + RLVLEVAQH+GE VR IAMD TEGLVRGQ V +TG+PITVPVG LGRI+NVIGEP+DE+G + IH+ AP +VEQ+TE QIL+TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + + Sbjct: 7 GVVGKVRQVIGAVVDVQFGDHLPAILNALETTNVGNRLVLEVAQHLGENTVRCIAMDSTEGLVRGQEVRDTGAPITVPVGPGMLGRIINVIGEPVDEEGPVDAIEMRSIHQPAPTYVEQSTEAQILITGIKVLDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAK 174 HSP 2 Score: 77.7962 bits (190), Expect = 1.527e-13 Identity = 47/88 (53.41%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINN+AKAHGG+SVFAGVGERT EGNDLY + ++ GV G GE L + P A AR G GL + + FR+ Sbjct: 161 KTVLIQELINNIAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKAALVYGQMNEPPGARARVGLT-GLTVAEYFRD 245
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_KLULA (ATP synthase subunit beta, mitochondrial OS=Kluyveromyces lactis GN=ATP2 PE=3 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 7.490e-53 Identity = 107/168 (63.69%), Postives = 132/168 (78.57%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 S G+V VIGA+VDV+F++G LP IL ALE+ +LVLEVAQH+GE VRTIAMDGTEGLVRG+ V +TG+PI+VPVGR TLGRI+NVIGEPIDE+G + ++ PIH + P FVEQ+T ++L TGIKVVDLLAPY RGGKIGLFGGAGVGK + L+ + + Sbjct: 36 SQGKVRAVIGAIVDVQFEQGQLPAILNALEIDTPEGKLVLEVAQHLGENTVRTIAMDGTEGLVRGENVSDTGAPISVPVGRETLGRIINVIGEPIDERGPINSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAK 203 HSP 2 Score: 83.1889 bits (204), Expect = 3.634e-15 Identity = 50/91 (54.95%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTV I ELINN+AKAHGGFSVF GVGERT EGNDLYR+M + GVINL +G+ ++ L + P A AR GL + + FR+ EG Sbjct: 190 KTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINL---EGDSKVA-LVFGQMNEPPGARARVALT-GLTIAEYFRDEEG 275
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MICAN (ATP synthase subunit beta OS=Microcystis aeruginosa (strain NIES-843) GN=atpD PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 9.283e-53 Identity = 82/172 (47.67%), Postives = 113/172 (65.70%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T + ++G++ Q+IG V+D F G LP I AL V ++ + EV Q +G+ VR +AM T+GLVRG +++TG+ I+VPVG+ TLGRI NV+GEP+DEKG + PIHR AP V+ + TGIKV+DLL PY++GGKIGLFGGAGVGK ++ L+ Sbjct: 4 TTETNVGKIVQIIGPVIDAEFPSGKLPRIYNALTVKGTNSAGQNLSVTCEVQQLLGDNQVRAVAMSTTDGLVRGMDIVDTGAAISVPVGKCTLGRIFNVLGEPVDEKGPVNVTETSPIHRPAPKLVDLEVTPTVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELI 175 HSP 2 Score: 68.1662 bits (165), Expect = 9.283e-53 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV++MELINN+A HGG SVF GVGERT EGNDLY +M++ VIN Sbjct: 167 KTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESKVIN 212
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MYCGA (ATP synthase subunit beta OS=Mycoplasma gallisepticum GN=atpD PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.285e-53 Identity = 88/167 (52.69%), Postives = 114/167 (68.26%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K S G+V QV+G VVDV F+ + LP I L + + +++L LEVAQ +G+ + R IAM TEGL R +V +T PI+VPVG LGR+ NVIGEPIDEK + + IHR AP+F +Q+ E +I TGIKV+DLL PY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 KYSYGKVYQVVGPVVDVVFEKQDDLPKIYDCLIIDEPNMKLHLEVAQLIGDDIARCIAMGPTEGLARNVKVTSTNQPISVPVGTEVLGRMFNVIGEPIDEKKPIDASVKRMSIHRPAPSFADQSNELEIFETGIKVIDLLIPYAKGGKIGLFGGAGVGKTVLVQELI 170 HSP 2 Score: 68.9366 bits (167), Expect = 9.285e-53 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ ELI+N+A HGG SVFAGVGERT EGNDLY +M++ GVI+ Sbjct: 162 KTVLVQELIHNIATGHGGLSVFAGVGERTREGNDLYYEMIEGGVID 207
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ENTFA (ATP synthase subunit beta OS=Enterococcus faecalis GN=atpD PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.286e-53 Identity = 88/168 (52.38%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVVDHSV---RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F D+ LP I AL V + ++VLEVA +G+GV+R+IAM+ T+GL RG V++TG I+VPVG+ TLGR+ NV+G+ ID + + IH++APAF E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIVQVIGPVVDVEFSLDQSLPDINNALVVYKNGEAKQKVVLEVALELGDGVIRSIAMESTDGLQRGMEVIDTGKSISVPVGKDTLGRVFNVLGDTIDLEAPFPADAERSGIHKKAPAFDELSTSNEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 67.781 bits (164), Expect = 9.286e-53 Identity = 57/143 (39.86%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |